ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741418 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◣ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

PTPRF
CCDC107
TBC1D4
MTRNR2L8
GTF2H4
ZMAT2
HLA-E
PSMB6
UBE2V2
ZNF335
PIH1D1
ALDH16A1
MRPL45
NEURL4
VPS37D
RNF24
OSCAR
NDUFA3
CYRIB
RNF216
PRMT1
MELK
AHCY
NLRX1
TOR1A
MTRNR2L2
NR6A1
CDK12
C19orf25
SMU1
STOML2
MRFAP1L1
TESK1
DLAT
RIN2
UBE2L3
KXD1
ENGASE
RAC1
RPS14
ARHGEF1
DPH5
NUDT9
PIGO
FBXW5
C8G
ZNF638
ZNHIT6
EPRS1
PAXX
UTP25
TOMM7
SMCO4
UBFD1
EARS2
XKR8
DRG2
EPS15
ADRM1
SLC29A3
WDR43
ZFAND1
UNC93B1
ZCCHC4
DNAJC19
CLPB
SMARCD2
AKIRIN2
KDM3B
SP2
DNM2
CTNNBL1
AARS2
CDC25B
PTK2B
UIMC1
MATR3
HEATR3
ZDHHC24
ACTN3
PTPN1
HAX1
SETD1A
SPATA2
EED
TKT
TENT2
MED23
CLTA
DYM
MLLT1
SLC25A16
MCC
PSMD4
MEGF9
RUSC2
PKD2L2
WDR74
ZDHHC12
TJP3
PRPSAP1
PDSS2
SLC31A1
FKBP15
SOGA1
ARHGEF39
FXN
EFR3A
SPAG8
SRRD
HPS4
ZCCHC14
HRCT1
COASY
AARSD1
ATG4C
SPAG4
TIMM10
WDR59
RIF1
LOC730098
FKBPL
PHKB
ITFG1
TPM2
NUP85
FKTN
RGPD2
RGPD1
NDUFS5
TMEM161A
CNOT11
CDK8
KDM1A
ZBTB3
OSGIN1
UBOX5
FASTKD5
ATF6
TAF1C
SPHK2
RPL18
ZNF131
RCN1
TCIRG1
GHITM
TFB1M
TLN1
CREB3
LTO1
TDRD7
LSM14B
CRLS1
SIRT5
DRAM2
CEPT1
SLC25A25
NAIF1
MRFAP1
CBX4
CLUAP1
PDCL
NELFCD
ST6GALNAC4
SLC35A4
APBB3
ELP3
GGCX
LMO7
UBE4A
PKD1L2
GABARAPL1
PAXBP1
PREB
TERF2
PLEKHG2
RPL6
CABLES2
STAT3
SLC25A44
ERCC6L2
EIF5A
CCNT1
SYNJ2
GSTA4
TRIP4
EIF3C
RIOX1
RPL13
SRPK1
SEMA4B
ADPRHL1
SH2B1
VPS13B
GLIPR1L2
KCTD18
TIA1
PCBD2
CCNC
SYMPK
FOXA3
GPCPD1
HPS1
PITPNA
DENR
ARNT
ADA
GRSF1
CIAO3
NOL11
SYT7
CWF19L2
IL11RA
DAGLB
PPP6C
KCTD2
ATP5PD
C9orf131
RPP25L
MAPK14
ZC3H15
SNU13
MRPL44
NCOA5
FOXK2
PDCL3
RAB5C
ARSD
LARP1
FAF1
TPK1
CDYL
CLK3
LAPTM5
PANK3
STXBP3
TRMT2A
RANBP1
TRMT1
MRPL38
NACC1
LDLRAP1
NUF2
HIBCH
RBM4B
GTF2H5
UQCR11
CACTIN
PDE4A
GABPB2
AP2S1
COX7A2
SLC38A10
PAK4
C17orf64
TOM1L2
DRC3
RPL36
MRPL39
BRAP
ACAD10
METTL14
SSBP1
SLC35B1
MRPL54
APBA3
PPP1R13L
FAM200B
LY96
COMMD2
AP3B1
MAP3K10
SARS2
MRPS12
KIAA0895
ANLN
RAD52
CIC
GPSM2
PNPLA6
PIP5KL1
NDUFS7
ZBTB45
ICAM1
ZNF184
DSTYK
HEXB
SGSM1
SLC30A6
GNE
POLG2
EMC4
GALT
POFUT1
PLAGL2
PCCB
FBXO27
CACUL1
DDX18
ICMT
ECSIT
RAB14
GSN
DPY19L4
LEO1
C16orf70
TRIB1
ISOC2
MRPL48
LYPLA2
PEX3
ADAT2
SWSAP1
SMNDC1
SMG8
ZZEF1
CYB5D2
NCBP3
TBPL1
FANCG
CHST12
MFSD4B
MARCHF7
ACOT9
MVB12A
PPP6R1
H6PD
MORC3
ILF2
DPP3
CEP164
NMRK1
ZNF70
TRIM26
NDUFAB1
E2F6
FAM98B
TOR1AIP1
CRTAP
CHMP6
LZTS3
ATG16L1
COMMD6
UCHL3
FAM168B
ATP6V1E1
TRAPPC3
NLRP1
CTR9
PSMD14
VPS37C
PPEF1
UPP1
FBXO46
PRXL2C
SLC44A1
MED18
SRXN1
USP45
TPP2
DYNC2I1
DCAF7
PTPN4
MAGI3
TIGD1
EIF4E2
TIMM9
KIAA0586
DMAP1
GADD45B
REXO4
SMARCC2
TIPARP
DMAC2
SMIM8
RFX1
WDR70
MANBAL
TSACC
CCT3
PARG
C20orf27
ATP6V0E1
SYT11
GON4L
KIF2C
FRA10AC1
NUCKS1
RAB2A
PCBP2
TCF3
STX16
DOT1L
ARMC7
TSEN54
CASKIN2
SHFL
SLC25A20
CCDC117
POU2F2
NFIC
WASF2
USP35
KCTD21
EMC8
COX4I1
ASXL1
TTC4
TGFB1I1
GRK6
ZNF77
RPS7
MTF2
RAB11B
VKORC1
ARFGEF2
HIPK3
DNAJC11
DARS1
KIAA2013
MEX3C
ALG10B
ABRAXAS2
RACK1
MRPL12
ZNF554
CALHM5
SCAMP4
ADAT3
TCTN3
GFPT2
PLEKHA7
KIF16B
KDSR
ARHGEF16
NKIRAS2
DNAJC7
FAM220A
DUS1L
CCDC22
ASF1B
RECK
UBE3B
ELMOD2
HPS6
KANSL3
RAB4B
TIMM23
TIMM22
SP1
TAF5
PRDM8
UNKL
TMEM242
ZNF606
GADD45GIP1
SPOCD1
BRIX1
BNIP1
EEF1AKMT1
FPR1
PIBF1
DIS3
YIF1B
POLR2D
MFAP4
DHX15
INTS12
GSTCD
PRRG2
NOSIP
VARS1
ABT1
ARPC3
RPS12
SF3A3
RNF114
ZNF256
RPL37
CDA
CERCAM
CLCF1
RPL24
ZNF408
ARHGAP1
CORO1C
LSM5
SIRT4
UNC13D
TK1
BCL9L
MRPL35
HINT2
UBE2D2
TRABD
PDLIM7
SBDS
BEGAIN
EHD2
BANP
NUMA1
LRTOMT
DEDD2
XPO5
POLH
COQ3
GRHL3
ZFAND5
RABGEF1
CYLD
CLPP
OPA3
TGDS
EIF5A2
RIN3
UTP3
SEC13
YTHDF2
PLEKHM3
ZNF687
NDUFS3
KBTBD4
ADAM19
SUGCT
MPLKIP
PDE8A
GORASP2
CDK5RAP1
UBXN4
PPP2R2A
MPC2
DCAF6
POLR1H
ZNF572
TAS1R1
NOL9
WDR11
RPS6
BRAT1
OPA1
CDC5L
SNUPN
RPS20
H2AC12
ZSCAN25
S1PR4
NCOA7
GPR160
HUS1
PRDX1
RBM12B
PRUNE1
MINDY1
ZSWIM3
ACOT8
FLVCR1
TRIM59
H2BC10
RBM7
C11orf71
ASMTL
DPY19L1
WDR7
TCERG1
ZRANB2
FEM1A
SNX12
SPRY1
GALNT10
ARHGAP24
ZFP36L1
CCDC43
SPTBN4
ABCC3
LUC7L2
FMC1-LUC7L2
MKNK2
MAP2K6
VPS35L
TMCO4
STAT6
SPATC1L
INO80C
COX5A
POLR1F
FUCA2
ACOT7
EIF3D
MTERF1
ARL14EP
C6orf226
PTK6
RPL37A
VTA1
NMBR
CDK11A
AMOTL1
CCDC42
CLIP2
TEAD1
PSMD9
HPD
H4C6
ERCC1
LITAF
PRKCA
TTC38
ARHGEF11
ZER1
SCML1
OMA1
DAB1
KDM4B
ZNF330
HSD17B11
AP2A2
SYNGR2
MITD1
COL18A1
TADA1
MRPL1
RBBP5
SNRPC
ENSA
SSBP2
PPAN-P2RY11
PPAN
CZIB
CDAN1
MCIDAS
SRP19
KIFBP
CDC42BPG
NPR2
NEDD1
IPO13
KLHL12
TTI2
TIMP1
TCEA2
SLC27A4
DEF8
USP42
MOSPD3
TUBE1
FAM229B
DSN1
DENND6A
GOT2
PABPN1
ATP5IF1
PSMC3
SDAD1
CARD14
ROBO3
ZCCHC3
TUFM
HSPA6
TMEM184A
COX20
ZNF579
TRIB3
CIZ1
TBC1D19
CEP78
WDR75
H4C8
PDE4DIP
COPS4
MRI1
CDK9
NAT10
ANKRD54
ACTL6A
NICN1
MTHFSD
LRRCC1
TACO1
IL1RAP
SH2D5
SAR1A
UBE2R2
UBA52
ST6GALNAC6
IFT46
CCDC97
CFDP1
PMM1
ETFDH
C4orf46
PRKAR1B
GNA13
THAP9
SEC31A
LPIN3
RAN
RAB5B
SIGMAR1
TRAM1
TPRA1
MCM2
CRK
ZNF234
RBM45
HMGN4
IFTAP
RIC8A
BET1L
VPS53
RHNO1
FOXM1
NEK6
RPN1
PPP4R3B
MCM7
AP4M1
ZSCAN26
VPS16
PCED1A
USPL1
HMGB1
RPL38
DENND3
IRF2BP1
HHAT
AMZ2
NIPA2
PRELID2
WIPI2
CTPS1
C4orf48
DYNLRB1
ZNF713
CTDSP1
TMA16
VSTM2L
MICALL1
MTMR14
RBM12
CPNE1
FAIM
FAM156B
FAM156A
SRP68
LGR6
MEGF8
DOLPP1
POLR3E
MUC1
KANSL1
TMEM168
PNISR
CDIN1
VCP
EIF4A2
ELAVL1
HERC5
NDUFAF4
KLHL32
TMTC3
CEP290
PCNA
MPRIP
EP400
GBA
MTBP
MRPL13
MRPL3
NBN
RIPOR3
TRAF6
RAG1
ABHD16A
YAF2
USP18
TIRAP
GTF3C3
COX16
PYCR1
ZNF655
LIMS1
UQCRQ
GDF9
EFEMP2
LASP1
PIGL
NCOR1
SYNRG
SIPA1L2
MYSM1
ANKRD40
PAFAH2
GTF2H2
GTF2H2C_2
MTIF2
ZNF609
CPPED1
ZNF577
ZNF3
ABCD3
EIF2AK3
RMND1
ARMT1
KLF5
RPAP1
SAAL1
MYO1C
DHX16
RGL2
SERPINB6
GOLGA7
SYT12
PPID
GNAI2
AP3S2
TRIM45
ALKBH3
PLEKHG4
SELENOH
TOR1B
MYCBP2
TMPRSS9
PDCD6
CATSPERZ
PPP1R37
LIN54
TBL3
CIPC
RPS24
EIF5
NANP
SPRED2
LINS1
ASB7
KTN1
RPL10A
AKT2
GTF3C5
ZDHHC6
VTI1A
STYXL1
SOAT1
GPATCH3
MTOR
FAM8A1
KLHL20
MSC
ZNF790
GORAB
ZBED1
PIGK
DHRSX
ANKRD36
GTF2H2C
UTP23
INTS5
RPL35A
IQCG
AGXT2
DISC1
ZNF444
WDR76
TBX3
SUMF2
TMEM41A
MAD1L1
NEMF
RPS11
REXO5
ERI2
AFG1L
ZNF862
TICAM2
XRN1
STAT5A
NBEAL1
MTFR2
FAAP20
STXBP4
COX11
THEM4
FAM227B
DTWD1
C12orf57
RNF207
LRRC34
EEF1AKMT2
BASP1
RPS16
TRAM2
TBC1D31
MGAT5B
PDLIM1
DCT
TMEM214
TSSC4
CDK20
CCZ1B
COA1
NCOA1
RPL26
MAFB
ZNF93
HNRNPA1L2
RFC2
XRRA1
SPCS2
HHIPL2
GIPR
B3GNT9
ELOVL6
RFX7
SH3GLB2
PIKFYVE
PUF60
TTC30B
MAP3K3
NOD2
ZNF555
RCAN1
SEPTIN7
SLC26A11
SGSH
ZSCAN22
IL31RA
CCDC174
ZC3HC1
CD2BP2
C17orf58
PPIL3
NIF3L1
MARS1
ARHGAP9
OSBP
STARD3NL
EPOP
ADAR
TTC14
ZNF391
PSMB2
PHLDA2
SMIM20
ZNF286A
TRMU
THOC5
POC5
MTMR12
ASB6
TMEM170A
SDHAF3
FGFRL1
PDE2A
ANKFY1
SLC29A2
NTAQ1
KAT2B
APRT
AURKAIP1
TBL1X
TNPO3
TBC1D23
MAPK3
TRMT10A
TMEM80
NAA30
MTTP
MTREX
DHX29
DEAF1
RPL27
NAE1
ADNP
SEC62
KPTN
FBXO30
RNF139
MOXD1
GPR37
EHBP1L1
RNF213
TTC21B
POLI
MBTPS2
DHX8
PEMT
MFAP3
FAM114A2
PLBD2
CNKSR3
QTRT1
OSCP1
IL17RC
BIRC5
TDP2
ACOT13
TXNDC9
EIF5B
NOTCH2NLA
RPS3A
VGLL4