ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190223 | SK-N-SH
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◣ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

LPCAT3
RARB
CPA4
MTRNR2L2
SREBF1
DHRS3
ABHD2
PDE12
ACACA
KCNMA1
SCOC
FAP
USP32
PRR7
SH2B1
ARHGAP22
ITGBL1
MTRNR2L8
IRF2BPL
H4C11
H4C4
S100A2
NDUFS7
CHD3
SH3BP4
SMAD7
TECPR1
ZGPAT
ARFRP1
H4C12
SMAD3
H4C8
RIN1
LIMK1
KAT6B
AMOTL2
RARG
DYNLL1
ABCA1
MICALCL
KANSL3
H2BC4
OTUD7B
TNFRSF12A
RGPD2
RGPD1
AXL
MAP2K3
WDFY2
SOCS2
KMT5A
H4C3
ANXA4
AAK1
IRF9
ACSL3
ZC2HC1C
ACYP1
LTBP1
CAPN2
NPAS2
LY6K
H4C15
H4C14
ZBTB38
TCTEX1D4
PDCD1LG2
BTBD19
H4C2
SLC22A18
LIMA1
PCOLCE
CEP41
MINDY2
TMEM184A
FSCN1
AHNAK
STAT3
ECH1
TSPAN4
CCN2
MRPS31
CLCF1
LMAN1
SLC41A2
BDKRB1
EEF2
FLOT1
SSBP2
CEP70
EIF4E
ETV4
CDKN2D
PRIM2
NFKBIA
ITGB2
AJUBA
CTHRC1
CCDC130
VGLL4
IST1
GABARAPL1
MYADM
DENND6A
SLC25A20
HBP1
TAGLN2
EXOSC4
CDCA7L
APP
IL6ST
ARL14EPL
IGFN1
MED9
REXO4
SKIL
KRT80
GDPGP1
CIB1
GSTA4
MICALL2
RNF145
SLC25A35
BCL2L13
DOT1L
RBM7
C11orf71
SPRED1
ZSWIM4
CASP9
H4C5
ZBTB20
RBM28
ESRRG
BHLHE40
LMNA
DONSON
H4C13
FASN
ARIH2
REC8
OSMR
HOXC10
PPP6R1
ERCC1
UCN2
UPP1
PARP2
ATP6V0E2
NEURL2
CTSA
TTI2
TBC1D1
OGFOD2
PKD1L2
PRKAG2
RTN4
HPCAL1
HRH1
PAMR1
GBA
NIBAN2
MTOR
ZBTB7C
CSRNP1
KAT6A
SNX29
POLR2J3
NAMPT
SEPTIN9
FGF1
FCRLB
ATXN2
RBKS
BABAM2
STX18
PIKFYVE
BEST3
NUDT15
GPRC5A
ZYX
UBE2T
SMARCD2
ZNF76
EFEMP2
MSANTD3
TXNDC11
MTRF1L
RUNX1T1
TBP
PSMB1
PLEKHG4
RRAS
LEKR1
WDR81
RBBP5
HMGN4
DENND4B
BAG6
GLIS2
COTL1
ALDOA
KBTBD2
TIMM13
HRCT1
TRAF3IP3
ST6GALNAC3
PTPRH
PITPNC1
MXRA8
SLIRP
ALKBH1
PHF19
CCDC174
SLC24A1
INTS14
CDH18
AOPEP
NR3C1
SMIM20
SEMA5B
CAST
TACO1
TRMT2A
RANBP1
MFF
LYPD1
SLC26A11
SGSH
ADGRG1
WDR25
WARS1
FRA10AC1
MGAT5B
FSTL3
COLEC12
ATP7A
SPATA1
GNG5
PAFAH2
MTRNR2L9
PCNA
CDS2
KCTD11
GPATCH8
GATD3B
GATD3A
PPP6R3
TBL1X
PROSER3
HSPB6
SRSF2
MFSD11
ZNF503
PMPCB
MTF2
MAGOH
MAP3K7CL
SPRED2
SYTL2
DCLRE1B
AP4B1
NEBL
RARA
MAP1B
CCDC57
NKIRAS1
PCTP
NR1D2
FLYWCH2
ZFAND3
SCARB1
KDM3A
GSN
PRDM10
L3HYPDH
GPR39
WDR74
STMP1
CRYGC
HSPA8
TMEM259
RBM19
SH2D7
ARHGEF6
CBLL1
FLNC
SLC25A45
ATXN3
CBX5
STING1
TFPI2
LSMEM1
TMCO6
DZIP3
CIP2A
DYNLT1
BOLA3
CLK3
LIMS1
EPM2A
ETFB
CNOT2
PTPN12
LYPLA2
PNISR
PLAT
CHD9
ARNT
USP30
MRPS23
NLRX1
ANKRD1
TNFRSF9
TBCEL-TECTA
TBCEL
MAST2
PER1
MCL1
ETS1
SRCAP
LOC730183
OTUD5
MLYCD
RASGRP3
GPN1
CCDC121
ACTA2
IMMT
TAF6L
RAP2A
FOXP1
ZNF225
ETFA
ATP5MC2
CTF1
KANK2
ARID5B
HYKK
IBTK
GFER
SMG8
PEX14
ZCCHC3
AP5S1
MIEN1
ARAP3
NNMT
ITGB1
SIRT4
LNPEP
NOLC1
RCAN1
FZD1
SSH1
IFRD1
NME1-NME2
NME1
TEX2
PDE8A
BCAR1
ZNF740
CSAD
CCNC
CYREN
FOXN2
HNRNPLL
KRT18
OLFML3
GPKOW
FAAP24
CEP89
HIBADH
ARHGAP23
PFKFB3
SPOP
DMAP1
THUMPD3
ZNF212
RNF182
MPP4
NOL4L
CHMP4B
RBM15
MICALL1
CLK2
MFSD6
PDSS2
CAPZA2
PSORS1C1
ANKRD50
OPA1
PCBP3
PARL
LRRC59
CCN5
HUS1
CCDC107
SRI
DMPK
MFAP2
PLEC
VIM
MAML3
SZT2
MED8
CREB5
NUF2
METTL3
AGAP3
TMEM101
TTC26
SMIM12
ACAA2
KLLN
CIITA
CFAP69
CHI3L2
SYNC
LOC114841035
FKBP2
EHBP1
WWTR1
PHACTR4
AGXT2
ZNF292
UNK
CFL2
MRM1
AKR1B1
POLDIP3
NCOA7
ASNSD1
ASDURF
CDK6
PICALM
LMO7
STX16
RPS7
SERTAD2
IQCE
EMP3
HIVEP1
ZNRD2
ACOT11
ALKBH2
CASD1
TCF4
CUL4B
WASHC2A
DUS1L
MAPKAPK3
CISH
USP9X
ZNF395
DPP9
SRRM3
TAF1A
EEF1AKNMT
HERC5
SPAG16
SSC5D
SERPINE1
DAB1
OMA1
CHCHD1
COX16
DCAF10
ACADM
BSDC1
CLK1
SCAMP4
ADAT3
COQ8B
MRPL21
IGHMBP2
GNAI1
AIM2
OXA1L
SPNS1
FAM156B
HECTD4
HMGA2
MRPS18A
FAM156A
IFIT3
PLK2
MRPL44
ATP5MC3
AGK
KPNA7
THAP9
SEC31A
ZNF446
TXNIP
EMC4
HSD17B14
ACADVL
LAMP1
S100A3
ZNF3
ANG
PIK3R1
SEMA3C
OR1F1
RB1CC1
RNASE4
KMT2D
BGLAP
TMEM41A
FRMD4A
S100A16
KHK
ZNF282
MCRIP1
SYNPO
INO80C
CDKN2AIPNL
NFAT5
HDAC7
CCNL1
SF3A3
ADAM17
PSAP
ID1
FBXO46
ARPP19
CALD1
BZW2
RAD54L
UMAD1
ZFP36L1
TPRA1
MED23
CD63
SHF
POPDC2
CDC42EP3
PEX2
KNOP1
ECI1
TARS1
FOXD1
AKAP10
BCAP29
LTA4H
KAZN
SLC39A3
RFFL
TBX6
MAZ
RAPGEF2
EMILIN1
RPL37
RBM45
RAB30
EMP1
MRPL34
SSBP1
TP53INP2
CYB5R4
USPL1
HMGB1
MFN2
U2SURP
MEF2C
E2F6
DUSP6
RINT1
BIN1
AKAP1
NOTCH2
C12orf73
SH3TC2
SACM1L
DDIT3
WBP1L
C20orf141
RNASEH1
PXYLP1
PRND
GAL3ST1
MIDEAS
RNF139
MTSS2
CXXC5
SUGCT
MPLKIP
CTCF
GNAI2
ZKSCAN5
C10orf88
CEND1
ANK1
COMMD4
RPTOR
RGS4
TLN2
GULP1
TSPAN10
NPLOC4
FN1
DYNLL2
MRPL3
GGT7
TMEM209
HSPA6
STX3
ETFDH
C4orf46
KEAP1
TP53I3
SIVA1
STON1-GTF2A1L
ACBD4
PSMC3IP
STK17A
H4-16
ERCC6L2
SRSF9
TNC
ATP10D
TACC2
ARHGEF17
COX18
WNT2B
IKBKG
CELSR3
COL1A2
ABHD14B
ABHD14A-ACY1
ABHD14A
CXCL8
DDR2
ATG5
DRG1
SCRG1
DHX8
COX8A
ALG10
GTF2H2C
RTTN
GTF2H2
ENO1
GRK6
SLC30A1
PDPR
VIRMA
ACTR6
OCIAD1
EIF2S3
CAMKK1
LRRC37A3
ALOX5AP
MDC1
MIGA1
ALG10B
PSMA1
PIWIL2
FAM3C
TPT1
XYLT1
CREB3L2
MTERF1
MRPL38
AGFG1
SBF2
COL7A1
PPP6C
BCL6
CUEDC1
SAMD4B
REM1
USP42
EXD1
CHP1
ZDHHC4
TMEM51
MTHFR
CLCN6
C17orf75
DNAJB1
NDUFA12
NUP42
WASHC2C
PCCA
TGFBR2
NUDT3
SUN1
GBE1
ARHGEF12
MNAT1
KBTBD7
ZSCAN25
KPNB1
CGRRF1
TRERF1
TEFM
SLC33A1
NDUFAF1
MITF
MGP
NOTCH2NLC
H4C9
SH3D19
FAM228B
SF3B6
RBPJ
PPEF1
THAP4
ATG4B
NHS
CCDC114
RPL38
MAN2C1
RAB5IF
S100A6
MTHFD1L
TCF12
NDUFAB1
PCGF5
SLC4A8
STK40
TBCCD1
DNAJB11
MTLN
RBMS1
RBAK-RBAKDN
RBAK
MED4
BMPR1A
RFESD
PEF1
R3HDM2
UPF3A
EXOC2
CYTH1
RIOK3
ILF2
PROSER1
NHLRC3
MICAL2
MRPL58
PRMT5
COIL
SRXN1
ATXN1L
MAD2L1BP
PRTG
INTS12
GSTCD
KRTAP2-3
TRIP12
FBXO36
EIF2D
MTFR2
VPS28
PRUNE1
MINDY1
PKN2
MKLN1
TRIM16L
PPP1R18
CELA1
AP3S2
TOB2
TNS1
DGKD
CFAP20DC
CD8A
DAW1
AP5Z1
ELK4
CBFA2T2
HMOX2
RXFP4
MMP2
ACAD9
GORASP2
INTS1
KRR1
MRPL2
KLC4
ANTXR2
NSUN5
HNRNPH2
ELOVL6
SCAP
GTF2H2C_2
BAZ1B
PRRG2
NOSIP
DKK1
PPIP5K2
GIN1
GPCPD1
SCRN2
SLC1A5
CCDC71
ZSCAN32
ZNF174
OGDH
LAMC1
HIC1
NOL7
DTNB
SLC22A4
CEP120
GADD45A
CUEDC2
DPYD
ANKRD28
PLEKHM3
AHCY
UTP3
RANBP2
LSM5
GOLGA1
FNIP1
HELB
RPL24
PALLD
USP3
GSE1
KMT2C
ZNF609
EDC4
SHBG
SAT2
MBNL2
PLAAT3
POLR2K
IL4I1
AZIN1
C18orf25
RRAGC
SOCS3
RCBTB2
CRABP2
POLR3E
AVPI1
PTEN
AK2
SOX12
HIF3A
OBI1
LIN54
HNRNPH1
GMFB
JUN
SH2D5
ECSCR
KIF15
KIAA1143
WDR70
NUP133
YWHAZ
NEK10
C16orf95
KDM1A
VAMP5
SRRT
ZNF205
LAMB3
TMEM248
MRPS28
RHOBTB2
BMERB1
IDH1
ZSCAN9
MRPL12
AP3B1
SLC25A3
SLC14A2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ARHGAP5
MTCH2
CHKA
C16orf71
ANKS3
CDK5RAP1
NFE2L2
WWC2
CAV1
SLC35A4
APBB3
SEMA3D
WDR4
SPATA20
PARP4
BAIAP2
TMEM86A
COX7A2
NDUFC2-KCTD14
NDUFC2
TRIOBP
ANO6
COQ5
HNRNPUL1
HEXA
PCID2
CUL4A
RRP9
PARP3
AGO2
SPRYD7
RSRP1
ZNRF2
TRIM6-TRIM34
TRIM6
SIPA1L1
SERPINB7
NANP
DLC1
MRPS18C
HELQ
HES1
DDX41
DDAH2
GATAD2A
NREP
MTRNR2L10
CLUL1
CCDC59
RPL22
PA2G4
IQSEC3
MIA3
DVL2
RPS6KA5
DGLUCY
ZNF674
TEAD1
SDHD
CFAP46
DCP1A
NPAS4
WASHC5
NSMCE2
TEN1
ACOX1
RPS6KB2
TTC39C
SNRPE
DCT
SPA17
SIAE
SNRNP200
IQCN
YIPF2
TIMM29
TICAM1
F3
DHX40
CNTNAP1
CCR10
FRG1
MTIF2
TBC1D19
DDX1
GSPT1
SEC14L1
DLAT
CENPA
METTL2B
PMS2
AIMP2
C2CD5
ZDHHC3
EXOSC7
PUM1
PHLDA3
NRG1
RGPD8
RGPD5
SAAL1
NOP16
HIGD2A
CLDN2
RGPD6
CORO6
PLK3
CTBP2
CTNNAL1
SDC2
RPS29
METTL27
GNPAT
C1orf131
HSPE1-MOB4
HSPE1
HSPD1
CYP4V2
ZER1
M6PR
KLRG1