ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX103223 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◣ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

FCMR
LPCAT3
MTRNR2L2
SREBF1
MTRNR2L8
TNPO3
SLC25A20
TAGLN2
RGPD2
RGPD1
PDE12
ACACA
DHRS3
VGLL4
ACADVL
NDUFS7
COTL1
S100A2
ZGPAT
ARFRP1
ECH1
FASN
CDK11A
SIRT5
RARB
USP32
ETFDH
C4orf46
FLOT1
CRY1
NEURL2
CTSA
NFKBIA
WDFY2
AMOTL2
RRN3
TBP
PSMB1
OTUD7B
ACSL3
RXRA
UROS
BCCIP
AJUBA
GMPPA
H4C12
NUDT15
GBA
ETFA
AXL
MLYCD
LY6K
CAT
DENND4B
H4C15
H4C14
SRCAP
LOC730183
KCNMA1
KANSL3
SDCBP2
REXO4
SH3BP4
ANAPC15
ROCK2
SLC45A4
C16orf95
SOCS2
STT3B
H4C11
CLCF1
ACAA2
PPP1R15B
HSD17B4
UPF2
DOT1L
MAP2K3
SH2B1
DBI
C2orf76
PTPN4
SULT1C2
ETFB
PLEC
NOL7
ABHD6
COQ5
ITGB2
ATXN2
SPRED2
MTF2
AKR1C2
CPA4
ESRRA
PPP1R12B
H4C3
RNF207
RIPK1
HSDL2
SMARCD2
MRPS31
H4C4
NUF2
STX18
DYNLL1
RBKS
BABAM2
ABCA1
GCN1
TMEM53
ARMH1
TPRA1
PTX3
SCOC
TSPAN4
FAM227B
DTWD1
ISCA1
STX16
PLD1
USP49
H4C8
KAT6A
TCTEX1D4
SKIL
ABHD2
LMNA
H2BC4
TBL1XR1
H4C2
MACROH2A1
PAFAH2
TECPR1
TMEM230
MTRNR2L9
SCAF1
MDM2
TFAP2A
TRAPPC3
PDCD1LG2
AP3S2
TMCO6
SMAD7
KRT80
IBTK
PCNA
HSPE1-MOB4
HSPE1
HSPD1
SCARB1
ZBTB37
GPR39
BRF2
BTBD19
E2F3
PARP4
PUS10
PEX13
KMT2A
RBMS1
RBBP5
SYDE2
HERC5
GRHL3
IST1
NR2C2
GPRC5A
SLC50A1
MYL12B
LAMP1
KAT6B
TXNDC11
TRMT2A
RANBP1
PRR7
ATP5MC2
TAF9
RAD17
AK6
PIM1
OSMR
FAM98B
LEKR1
EIF4E
HIVEP1
AIFM2
ACBD4
RIN1
GPR137
WASHC2C
OARD1
NFYA
FRA10AC1
TMEM182
MFSD9
ACADS
PNISR
CCNL1
TNFRSF12A
DONSON
GPATCH8
EXOSC4
IRF9
SMAD3
RNF145
MED23
WASHC2A
IFRD1
SMG5
ELOVL6
CCDC174
LAPTM5
CDS2
RHBDD1
SF3A3
FASTKD1
ENO3
C2orf42
RNFT1
MRPL34
NOTCH2NLC
ZC2HC1C
ACYP1
BRCA1
ARSB
GBE1
PEX19
POLDIP3
PPP2R1A
NRL
DCAF11
IPO4
AKAP1
ETV4
ASB1
HNRNPUL1
WDR74
HINT2
PRELID3B
FOXJ3
FAM207A
ADAM17
POLR2J3
MINDY2
NOTCH2NLA
RPS7
PHYH
LBX2
NADK
TACO1
IRS1
DUS1L
SLC25A1
SPEF2
KLF11
SERPINB1
MRPL44
CDK11B
STAT3
DMAP1
PLEKHG4
H4C5
NIBAN2
CEP70
TMEM256
BOLA3
FABP1
ARIH2
ARHGAP22
KDM3A
GABPA
ATP5PF
TANK
PCK1
NKIRAS1
ZNF76
FLYWCH2
SLC39A3
SLC24A1
INTS14
ZBTB38
RBM28
KLF6
AGT
MTRNR2L6
AP1M1
ARL14EPL
VIM
DICER1
PPP5D1
NME1-NME2
NME1
CALM3
POR
INTS12
GSTCD
CDKN2D
C3
RBM15
COQ10A
RNF168
LIMA1
RB1CC1
CARHSP1
EPM2A
STK11
CLTC
SPATA1
CCN2
KDM1A
ITGBL1
H3C15
H3C14
KMT5A
TMEM139
OBI1
NUP153
AURKAIP1
ANKRD28
MAP3K7CL
ZCCHC4
SKIV2L
NELFE
COMMD2
MYADM
TMBIM6
SCAP
OXA1L
PPCDC
PCCA
ZNF740
HPCAL1
CSAD
CFB
ZNF746
BHLHE40
RARG
MMD
RPS19
NQO2
CDK5RAP1
NOTCH2
MTRF1L
UPRT
ABCB7
GSN
APOA2
FZD5
PPP6R3
ARNT
DNAJC11
CYBA
IRF2BPL
S100A16
UPF3A
DAGLB
GSDMD
FUT5
ICAM1
EEF2
DSTYK
DCAF10
SLC25A35
ANK1
SLC25A47
PSAP
SS18
AHNAK
LONRF3
TMEM242
F2
PDE6G
OGFOD2
DUSP9
MRPL3
RCOR3
ZBTB45
RRAS
PLEKHM3
RGPD8
RGPD5
ENOSF1
NR1D1
ADAMTS12
ZBTB20
RARA
PEX3
ADAT2
SSBP1
PIKFYVE
SPIN1
NEDD9
CCDC88A
ACTR3
TIGD2
PPP6R1
CEP41
MICOS10-NBL1
MICOS10
CPT2
TINAGL1
DZIP3
CIP2A
SYNPO
SLC51B
HIC2
MTOR
STK10
SELENOI
NR2C1
ADGRF3
PMPCB
STPG1
NIPAL3
COPS7B
DPY19L4
UBE2I
SRD5A3
PLS1
OXSR1
DCLRE1B
AP4B1
PARL
INO80C
TATDN3
NSL1
FGA
TYK2
HUS1
MFF
MTRNR2L10
RPL38
PEX14
ERCC1
CCL15
ZBTB7C
TOB2
RBAK-RBAKDN
RBAK
C3orf86
DCP1A
IGFN1
CFLAR
SSBP2
KEAP1
RPS3A
RNF111
CHD1L
TEFM
C1RL
ABCC6
PISD
NANP
CD63
UAP1
TP53INP2
CA5A
CHD9
TTI2
MAPKAPK3
CISH
NAT8
ATR
NDRG2
H4C9
TCIRG1
USP42
TMEM101
SERTAD2
RPL27
CCDC77
PSMD6
ATP1B1
PLCB2
MED9
RPL29
SERPINE1
ALKBH7
CYP4V2
SLC20A1
SCML1
KDM3B
C2orf49
SCNM1
LYSMD1
CNOT2
AGXT2
PSMF1
LIN54
ALKBH3
TBC1D1
KLLN
HEXA
CHD3
SLC9A8
NCBP3
CYB5R4
DAB1
C16orf54
KRTAP2-3
ALG10
PTPRS
FRG1
SLC33A1
SIRT4
ZNF341
DENND6A
ACSM2A
SH3D19
APOA5
TRIP12
MBD6
FBXO36
APOB
TMEM184A
USP30
STK17B
SEC23A
NBR1
HINT3
CALCOCO1
PANK2
NPAS4
CDCA7L
PCID2
CUL4A
MARCHF8
LNPEP
CAPN2
TMEM259
EXD1
CHP1
SIAH1
BNIP1
RPL37
WDR81
SUN2
PHF19
EIF2AK1
AK3
A1BG
PRKAB2
UBE2R2
REC8
GTF2H2C_2
CX3CL1
MRPL4
TBCEL-TECTA
TBCEL
ERLIN2
CTNNB1
SOD2
MRPS23
UBFD1
NMNAT1
LZIC
EARS2
DCK
ACSM2B
B4GALT7
NRSN2
TOP3B
MTIF2
ABHD15
USPL1
HMGB1
DLC1
C4BPB
CDKN2AIPNL
GNAI2
ARHGAP4
ADGRG3
TEX14
RAD51C
NFE2L2
MRPL39
AHCY
FLNC
ARHGEF12
IL6ST
WDR7
TBC1D19
USP3
DHX8
ALDOA
OMA1
NOLC1
EEF1A1
MSL2
ZNF846
LCK
TK1
FAP
ZNF44
TIMMDC1
SLC25A45
PRDM10
PRKAG2
ZC3H6
PDSS2
FSCN1
ATP5MC3
MAN2C1
OPA1
EIF1AD
BANF1
TRIB1
MITD1
CHCHD1
RAP1GAP2
ANKS4B
PLIN2
RPS6KA1
NDUFS3
KBTBD4
TOR1AIP1
RBM7
C11orf71
ARHGEF1
IL4I1
AMBP
TIMM13
GFER
ARHGAP45
PDE8A
HRH1
DDX5
BMS1
RETSAT
RAD54L2
MGST2
BDH1
STAT5B
SLC25A51
THUMPD3
FAM228B
NOTCH2NLB
SLC23A2
UGT2B10
EIF1B
PKP4
ERRFI1
GTF2H2C
SNRPB
RRP9
PLTP
PARP3
EIF2D
SMG6
RCAN1
NDUFAF1
CLIC1
TMEM41A
NFAT5
IL7R
ASXL1
RBP4
ECI1
ZNF292
KRT8
UBC
ACSF3
PSMC3IP
PLOD2
MICALL1
YTHDF2
CCNC
GORASP2
TXNIP
C6orf89
RFFL
RABGGTA
NCOA7
LMAN1
INTS1
MCL1
XKR7
C11orf91
LGALS1
KLF7
CENPH
S100A3
MAD1L1
MRPS15
HAAO
GABPB2
MAMSTR
SEC14L4
BHLHA15
SGK2
UCKL1
PCTP
TSPAN10
NPLOC4
LRRC37A3
SIPA1
COMMD1
ACOX2
ARHGEF16
FBXO31
CLUL1
CYP1A1
MFN2
SH3BGRL2
SCAND1
KMT2D
GTF3C3
COMMD4
TRAPPC12
ALOX5AP
PRELID3A
TBX6
UPP1
GLTPD2
U2SURP
SERPINA6
HBP1
TAP2
VOPP1
SUPT5H
STING1
SERPINC1
SLC22A18
GFI1B
EIF3F
SF3B6
IMMT
DEAF1
ARSG
RARS2
ORC3
CREB3L3
SCD
GALK2
COPS2
SNX17
PRMT9
EIF2B4
RNASEH1
SEPTIN9
RBSN
MXRA8
BCL9L
CABLES2
ROGDI
COX16
PTP4A1
NCOA4
INTS5
NUP54
HNMT
AARS2
HSPA8
FDXACB1
CCDC57
C11orf1
SLC19A3
PRSS27
MAF1
DDX1
WDR36
GDPGP1
CIB1
LRRFIP2
RTTN
NAALAD2
MRPL16
NR1D2
POLD3
LDLR
KATNBL1
UNK
IL27
CCL20
HRCT1
EFEMP2
PARP2
CRABP2
TNS1
NR0B2
COQ8B
ATXN3
ITIH3
EMC4
TF
PROSER3
ID1
HSPB6
ZBTB40
FGF1
BLOC1S1
WTAP
KIAA0232
ZMPSTE24
AHSG
MEIG1
HERC1
GTF2H2
RMND5A
HAL
ESRRG
CSRNP1
CDK12
WDR11
ACADM
CCDC59
ZER1
GSE1
FOXP1
CYREN
SIRT6
RPL22
RBM17
KAZALD1
ENO1
ANKRD24
ADPRHL1
WASHC5
VAMP5
STK17A
PDE4DIP
NSMCE2
HOXC10
FAAP24
CEP89
TAF6L
RBM45
HSD3B7
ZNF3
TBL1X
DHRS13
YARS1
S100PBP
POLR2J
PICALM
MDC1
GNG5
DPP9
PA2G4
WDR25
WARS1
NKD1
LRP6
MRPL58
SMG8
DGKD
MC1R
FXN
ZMYND8
SERPINA11
PRICKLE4
NHLRC1
FRS3
RAC3
APOA1
JRK
RTN4
KCTD5
GSPT1
AKIRIN1
TTC26
CALM1
LCAT
CCDC130
GRK6
LMO7
ARL8B
TMEM218
RMND1
PDE4D
LRRC59
ARMT1
ATG16L1
ADGRG5
WWC2
KCNAB2
POLR3E
SPNS1
RAB11FIP5
PKD2L2
TARS1
WDR24
TMA16
TJP2
OXSM
NGLY1
CIPC
MED4
SAR1B
HNRNPD
ZSCAN30
ZDHHC4
DYNLT1
LIMK1
GSTO1
CTNNA1
TMEM51
LONP2
CAPS2
ABCC11
AGK
SEC14L1
MOB4
ENPP4
CLIC5
KIAA1217
HMGN4
BRWD1
A2M
POLR3B
PGM1
KRR1
C5orf51
CDC27
TSC1
SLC39A13
NCOA2
GLIS2
UBR4
SEC13
LOC100289561
GSTA4
PCOLCE
CASP9
STRA6
VPS33A
GLT8D1
ASNSD1
ASDURF
TMEM222
FGL1
ZC3H10
MTHFR
MICALCL
GREB1
TBC1D7-LOC100130357
TBC1D7
SCRIB
M6PR
KLRG1
GHRL
SLC25A34
TRIP4
MTFR2
NNMT
MKRN2
TMED5
CCDC18
C12orf73
BAZ1B
SLC35B1
MEF2C
GATD3B
GATD3A
CUL1
PAXBP1
IFNGR1
PSMD3
GTF3C5
ZNF781
SPATC1
SLC39A7
RXRB
PRRG2
NOSIP
KATNA1
FGR
MFSD4B
VTN
SIKE1
SARM1
IDH1
HNRNPH1
GGT7
ANXA9
VNN3
NOXA1
LRRC32
BEST3
CBS
FOXN2
AGMAT
RNF220
RNF125
DKK1
TUBGCP3
RAB5IF
PRIM2
GFM1
DLAT
PACSIN3
SAC3D1
UGT2A3
TMC8
TEN1
ACOX1
RPL10A
EXOC2
MIGA1
ZNF217