ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130090 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◣ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◢ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◢ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

RAD51AP2
POU5F1
CD99L2
CCDC200
ROR1
CLDN9
TNC
TCF7L1
TARBP2
MAP3K12
PRICKLE1
CDH11
WDR74
SHISA5
CALM2
H4C12
FBXW11
ZNF532
NXF1
GOLGA6B
POLDIP3
MAD2L2
KIAA0930
MTF2
DPYSL2
TDGF1
H4C11
IFIT3
IGSF8
ANO1
NAV2
SET
GOLGA6D
SLC7A5
AKIRIN1
ZNF664-RFLNA
ZNF664
CCDC92
H4C15
H4C14
PMEPA1
PF4
PPBP
ZC3H10
RPL41
IGFBP3
FUS
NES
RPH3A
TRA2B
GOLGA6A
ZNFX1
H4C3
H1-6
ID1
GLB1L3
RAB15
ADARB1
PHF23
DVL2
ZSWIM7
TTC19
GADD45B
HEY2
DLG2
TMEM132B
LARP1
PNP
DNMBP
MTA3
SYPL1
INTS6
CALM1
FOXD1
MYL6B
H3C15
H3C14
H2AC19
H2AC18
H2BC4
H2AC6
LRIG1
FBXO40
H1-2
MAP2K7
DDIT4
RPS8
GPR89B
DCLK1
EIF4G2
ALDOC
PYGM
H4C9
RSRP1
SKA3
MRPL57
RAB43
UNC5D
GOLGA6C
NCOR2
UNK
H3-3B
TM9SF4
U2SURP
TGIF1
TNPO3
TBL1X
WFDC1
STX10
IER2
AMOTL2
H2BC5
H1-4
SEC22B
MTRNR2L8
SEMA6A
TSEN2
LYNX1-SLURP2
LYNX1
SNCG
MMRN2
SRSF7
STK17A
RPLP1
H2BC12
H2AC12
SEPHS1
FAM20C
MUC1
PRDX1
POLR3G
MBLAC2
WDR75
PLAG1
CHCHD7
VAMP1
LZTS1
SRCIN1
UBB
FAM120B
LINGO1
DLL1
GPR89A
COX18
CCDC138
NANOG
TMSB4X
TUBGCP5
ESPNL
RPS13
KLHDC7A
TMEM107
POLR3D
SPRR2F
PLAGL1
STOX2
ZCCHC9
LRRC3
EPHB1
SRSF3
KRBA2
CBWD1
YTHDC1
EPHA7
CDH9
POGLUT3
TSPAN5
IL34
MRPL53
TMEM242
PLEKHB2
TFPI
PDPN
NBPF1
RPL37
GTPBP6
MAZ
PLPP2
RAF1
ZNF419
PIPOX
TMEM30A
CDH10
PPP1R37
PAPLN
ZFHX3
GPN2
AHDC1
OR5AR1
HSPA1B
SLC3A2
TUBD1
RPS6KB1
H3C10
H2BC13
H2AC13
CTSF
OPCML
AGO1
PMPCA
ENTR1
MTHFD1
RBMX
LTA4H
MTCL1
RND1
FGF1
EEF1A1
H2BC11
H2AC11
FRAT2
HEXIM1
LTBR
H4-16
H2AJ
SCNN1A
PRRG2
NOSIP
TBRG1
CD24
TUFT1
FAM126A
WDR4
HSPB1
TOB2
NKIRAS1
RPL15
FGFR2
STAT3
GDPD2
ALDOA
TIMM13
PLEKHG3
GCNT2
GBA
ATP5MC2
EFHC1
PBLD
HNRNPH3
TFAP2A
SLC25A3
VPS29
RAD9B
C8orf58
ABI1
SNX8
KIF27
ERLIN2
LAMP5
MUSK
KRTAP4-12
SPATC1L
KBTBD3
AASDHPPT
NCAPG
ITPA
DDRGK1
VIRMA
COPS4
H4C5
H2BC7
SREBF2
STRAP
RPL37A
NAE1
KIFBP
LOC389831
KDM6B
NEUROG3
PTPN6
C12orf57
CBWD5
CMKLR1
H1-7
GINS4
EEF1AKMT1
NSRP1
PHGDH
DCUN1D5
B3GALT5
STRA6
SLC5A5
RPL31
SYT1
RTL8C
SEC22C
NKTR
MSH2
CCAR2
SFR1
SH3D21
ZNF286A
BBC3
NUFIP2
SLC2A11
FOXO3B
GJA1
DPY30
PPIH
CLUAP1
C16orf90
ADAR
PNRC1
TRIM71
TPCN1
SNRPD2
QPCTL
DNAJC9
NAGK
RPS7
ZNHIT3
GADD45G
TMBIM6
RBM7
C11orf71
RPSA
TPM1
H2AX
H2BC8
H2AC8
SPRY4
IKZF5
ACADSB
FAM228B
PDCD7
SF3B6
HIP1
CCN2
MED11
RPL10A
POLG2
ASMTL
NOLC1
H4C2
H3C2
EOLA2
ZNF775
TCEAL8
TMEM52
CALML6
SRRT
TIMMDC1
ZSWIM1
HMGCR
FGF19
RAB5IF
CRYAA
CRYAA2
TRIM27
DNAJC25-GNG10
DNAJC25
MRPS23
HASPIN
DR1
JPT1
ZBTB4
SLC35G6
POLR2A
CSRNP2
FAM53C
CDC25C
MKNK2
MYLIP
BAIAP2
FSCN1
C12orf65
FAM43A
SDC4
TTI2
UBE2S
PFKFB3
RNF19B
PITRM1
KDM4A
INTS5
TRIM25
VASN
SERPINE1
PLEC
MICALL2
PABPC1
DGAT1
FBF1
TOB1
BTG1
SOCS1
SIRT4
POR
DNAJB1
PLK2
EIF4A3
AFF1
NCEH1
USP42
ANO10
NFKBIZ
ZDHHC4
HNRNPH1
MTRNR2L2
MSH3
DHFR
LDHA
ABHD5
ARL15
SPTAN1
MTHFD2
IER3
TFRC
SRSF6
C5orf24
PSAP
HEXB
POLR2J3
FLOT1
SDCBP
TBC1D22A
ADCK5
EXT1
LRCH4
FBXO24
CYCS
SOCS3
BLOC1S2
TGOLN2
MARCHF6
ZBTB45
LUC7L
KIF5B
HNRNPAB
TTPAL
POLG
SGF29
RBM25
PIK3R3
DENR
DYNLL2
IER5
NEU1
SESN2
NARF
IFRD1
C1QTNF6
DESI2
RINT1
R3HDM4
ORC5
UBE2D1
TAF4
SLC1A5
ERRFI1
SQSTM1
RARS1
RELT
ZC3H12A
PABPC4
BSG
NANS
SKP1
FDXR
RPL3
TAGLN2
HNRNPA2B1
CBX3
GNAI2
TATDN1
NDUFB9
ATF3
DDX5
ZFAND5
DNM1L
NTMT1
MAT2A
APTX
TRIM28
FTL
SPPL2A
HBEGF
SLC16A3
BRMS1L
CITED2
DNAJB4
SLC38A2
PHACTR4
PDLIM7
RBM34
P4HA1
ERCC1
MLXIP
HSP90AB1
MGAT1
PTDSS1
MTERF3
RNF14
KANSL2
NUDCD1
HEATR5A
DNAJA1
ARL6IP1
UAP1
PHLDA2
CDKN1A
CNNM4
IMPA1
TUBA1C
OAT
TRIB1
ZNF248
ALG6
SPRING1
RNFT2
KLHL12
ARL4D
USP45
PPIF
SMURF2
NRL
SRSF2
MFSD11
NDRG1
TRAF4
DRG1
TNFAIP8
TMEM199
POLDIP2
ZBED8
NBN
ZCWPW1
MEPCE
TNPO1
SENP5
RPLP0
ITFG2
ID2
NET1
DYNC1H1
S100A13
SLC30A5
FARSA
CALR
PPP1R2
LOC100287896
LIPT2
METRNL
STIP1
RPL5
PCK2
LRPAP1
SIL1
PPP1R3C
CSNK1G3
STK38
TUBB2A
INTS13
FGFR1OP2
BAMBI
TERF1
AMACR
TNFRSF10D
C2orf42
ASCC1
ANAPC16
SPIDR
B2M
IER5L
PTPRA
PPP1R12C
PARK7
CSKMT
C11orf98
NASP
GTF2B
SMIM12
AMD1
SERINC5
CEBPB
RHOB
NRBF2
XKR9
LACTB2
DNAJB2
PTPN2
CCS
CCDC87
ZFAND2A
IRF1
FAM133B
OAZ1
MIGA2
SRP68
WIPI2
HIF1AN
HLA-E
PUS7
GRB2
RNF135
SRA1
FAM83D
GOLPH3
NCOA5
SGK1
NOTCH2NLC
RELL2
YWHAG
ZNF143
EEF2
IMPDH2
MYH9
CRISPLD2
TMSB10
KAT6A
EFR3A
CYP20A1
RAB11A
TSTD3
RPAP2
GLMN
PRMT9
THBS1
FAM149B1
ECD
CAVIN1
RNF34
NFKBIA
RPL12
LRSAM1
RMDN1
TECR
DYNLL1
IQCD
SERTAD1
EHD1
PARP2
DBNL
KDM4B
SLC26A2
PRPF4
CDC26
E4F1
TNFAIP2
SWI5
GOLGA2
DUSP1
WASHC4
TBC1D31
NCOA3
MED17
UGP2
RIOX1
TAF13
XPO5
POLH
LRIG2
RIPK2
ADRB2
RBM6
PTPN1
BTBD10
AHR
CTNNB1
ZBTB37
HDAC3
PPP1R15A
FER
PIEZO1
UBA2
STAT1
DPY19L4
RASA1
TEKT2
ADPRS
SLC2A3
KISS1R
TMEM170A
C15orf39
TMEM79
SMG5
HGH1
PSMD14
C19orf48
TAF12
TUBB4B
DENND6A
GOSR2
YLPM1
DNTTIP2
MAPK8
BZW2
ANKMY2
RBM14-RBM4
RBM14
SCFD1
COTL1
SLC8B1
TMEM151B
NFKBIE
FOS
ZMAT3
CCNL1
SELENOT
ATP5F1B
TEP1
CPEB4
TMX1
RPS3
SRSF5
TRIP11
GLS
KCTD7
NUDT15
LIMA1
TM9SF3
NPM1
HSPA5
PMAIP1
DIMT1
RGS3
ZNF148
ALAS1
S100A1
ACER3
ICE1
SLC20A1
CCDC80
ACAP2
FBXW2
PDK1
ADSL
NOTCH2NLA
VCL
MFAP3
FAM114A2
ATP6V0C
THOC3
FAM234A
GTF2H2C_2
GALR2
TMEM249
SLC52A2
FBXL6
SEPHS2
CZIB
JUNB
IPP
MATR3
RPL13A
SPECC1L
RUNX1
HRH1
AFG3L2
BCAR1
FAM220A
HMBS
CUL7
EIF3A
TPI1
RETSAT
CIRBP
ZCCHC24
NOTCH2
GTF2A1
SMN2
SMN1
FLNA
DELE1
ABTB2
TECPR2
CINP
HMGCS1
RIDA
POP1
NIPBL
MTMR2
DSCC1
CRLS1
SLC35C2
NCL
EIF4A2
LRRC37A3
TKT
WDR47
GTF2H5
MGRN1
ASH1L
GTF2H2
HERPUD1
MTRNR2L1
BORCS5
CCNG1
C7orf26
FGFR1
PDZD8
TUBA1B
POLR2D
GSTP1
ZNF622
DNMT1
MSANTD2
ING1
AKAP1
RAB2A
CLIC4
SLC16A1
ABTB1
SLFN5
TMEM138
CYB561A3
ZNF326
KLHL7
TAX1BP3
EMC6
SIKE1
GTF2H2C
TRA2A
KATNBL1
HSP90AA1
TNIP2
CSRNP1
MTRES1
DGKH
CNBP
PRPF39
JUN
RNF141
RSAD1
LZTR1
SSNA1
ANAPC2
SAR1A
SLX1B
SLX1A
BOLA2B
BOLA2
C6orf89
GSTK1
TNRC6B
ERN1
MCL1
ATG16L1
SLTM
STK38L
PSMD8
UCKL1
RND3
EPHA2
PCTP
TSPAN10
GLUL
ASPSCR1
ATOX1
ARPC1A
RABIF
MT1X
SNF8
PLK3
MAPK1IP1L
BICD2
MKRN2OS
C6orf62
RBM12
PGAP2
CPNE1
LIN7C
NOL11
ENTPD5
CEP85
BBOF1
XRN2
SART3
ISCU
LRCH3
KCNG1
RAB6A
ZNF800
APPBP2
GNAI3
DENND10
SMAD7
TMED9
LATS1
ZNF468
EPHX1
TFAM
DCXR
ATP5F1E
SDHAF3
KLHL21
TAF15
KIF18B
RPL6
TK1
PRKRA
PJVK
ACSL3
MRPL35
IMMT
POLE4
FAM13B
PA2G4
COPG1
ANXA2
ZFAND1
AARS2
PDIA3
THADA
MAP3K3
ATP6V1B2
WDR11
OTULIN
TSPAN17
KCTD13
EIF2AK1
SAV1
ZNF546
MACROH2A1
MKRN2
HES6
RFESD
ZDHHC16
EXOSC1
DDX3X
RBBP5
DPH5
SMOX
NPLOC4
ODC1
ZKSCAN2
ASCC2
CCDC61
SNAI1
HERC3
RGS2
AHCYL1
YKT6
TACC1
GFUS
RAB22A
C16orf72
TMEM71
PHF20L1
POMZP3
BCAP29
PTMA
BTBD1
OGDH
EFNB2
RDH11
POLR2C
MOCS2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
RUFY1
TBCCD1
DNAJB11
BOLA2-SMG1P6
OPN3
CHML
SIRT1
SETD9
NEK4
C12orf29
C2orf69
PRR13
FEM1C
RSPH3
AMZ2
RPL22L1
MBD6
DDIT3
CYTH2
MIB2
NUP133
MRPL10
LRRC46
RPS6KA4
HARS2
HARS1
C1orf74
CBFA2T2
SFT2D3
MAP2K2
STXBP3
WDR70
SMARCB1
SLC38A10
EIF5
BNIP3
TBC1D7-LOC100130357
TBC1D7
GOLGB1
PYROXD2
DNAL1
GNL2
NABP1
NFE2L1
YAE1
VIM
PNPLA2
NLRX1
SCRIB