ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064482 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◢ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◣ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◢ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

PMEPA1
NODAL
PITX2
POU5F1
LEFTY2
ZNF664-RFLNA
ZNF664
CCDC92
SLC7A5
FGF8
NPM3
LEFTY1
MMP9
CAV1
CNOT3
STOX2
SKIL
RAD51AP2
TCF7L1
FAM20C
MTRNR2L8
DPPA4
MTRNR2L2
MSH3
DHFR
SNX18
DST
CD99L2
RPRM
VOPP1
ROR1
NEURL1B
AGO1
NPFFR2
CHD1L
PRKAB2
ETS1
CLDN9
TDGF1
EPHA1
PLAGL1
GLB1L3
TEAD4
NTM
LRAT
DIDO1
PRICKLE1
EPN1
FAM178B
SHISA5
FBXO40
NBPF1
SLC46A1
MAST4
PIP4P2
CER1
STK17A
L1TD1
MDN1
CHD2
CYB561
WNT3
RAB15
NDRG2
ARHGEF40
SMIM3
TIMP4
PMF1-BGLAP
PMF1
CFAP410
MAD2L2
STMN1
GOLGA6A
KSR1
MUC3A
NAV2
RNF141
GOLGA6C
MTRNR2L1
ARID2
BCKDHB
CRYAA
CRYAA2
KCNN2
HES1
ITGB1
SLAMF1
ZNF148
DCAF10
ZSWIM4
MRI1
USP53
USPL1
HMGB1
CALD1
GOLGA6B
ANO1
NUF2
PBLD
HNRNPH3
GOLGA6D
FRA10AC1
CTSC
LYNX1-SLURP2
LYNX1
MTF2
JMJD1C
SUPT6H
SDF2
RARB
TCEAL8
LINGO1
LHX1
POLR3G
MBLAC2
WT1
SYPL1
KAT6A
SRSF2
MFSD11
SALL2
KRAS
LRRC37A3
PCBP1
ASIC2
EOMES
MNAT1
HEY2
BCL11A
NFAT5
CCNL1
TBX22
NFE2L3
PLPP2
DCLK1
BAMBI
DNAJC10
RNF43
MAX
FGF19
NEDD4L
TULP4
VPS13B
KMT2E
RAPH1
MSMO1
SLC6A15
MOB4
PPA2
KDM5B
FRG2
BUD13
HOXB13
PDPN
HSP90AB1
FGF2
NOCT
CASP3
RARA
NIPBL
TNPO1
DUSP6
EFEMP1
CORO2B
AVPR1B
ARIH1
FAM120B
DLL1
TPCN1
AKIRIN1
G3BP1
TMEM106B
GTPBP6
RTN4
PPM1H
CD101
ZCCHC3
FGF1
STRA6
PPARGC1A
PABPC1
LRRC57
HAUS2
CEP83
DAB1
FOXN3
NTRK2
WFDC8
LRP12
MMADHC
PLEKHA5
DPPA5
HEXB
FEM1C
SNRPN
NES
WASHC4
POU2F3
PIK3R3
DCP1A
LIMS1
SCOC
PDE1B
TEX46
KDM1A
TSPAN5
MARCHF7
MTX2
ATP23
GMCL1
ZNF518A
NEUROG3
MED11
NT5DC3
MRPL39
PICK1
FAM83F
VRK2
ID2
COPS8
IFNAR1
RIMBP2
H4C12
ZNF286A
PCNA
IGSF8
ZFHX3
SHISA8
C1orf74
MICU2
SMAP1
OPA1
C3orf52
GOT2
USP37
CNOT9
CNPY1
LRCH3
LHPP
NCOA5
WDFY1
CPNE8
MBNL3
CFAP161
SMC5
TSEN2
GCNT2
MAP7
ALDH7A1
TBC1D5
SLC1A1
ANO10
ABHD5
WDR48
SCN11A
GLRA3
MLLT11
CDC42SE1
KCNT2
ID1
ANKRD46
RWDD1
LARP4
FAM186A
MARCHF3
PDE1C
MYL12B
WFDC1
HTR5A
ASCC3
SARAF
FFAR4
CTNNB1
CCDC88A
EXOC6B
DPYSL2
PTCH1
HES5
PANK4
CEP70
SEPHS1
FAT1
DNAJC25-GNG10
DNAJC25
METAP1
SH3RF2
ACCS
DPY19L4
LRRC59
PMAIP1
CBWD5
RRP1B
HSF2BP
SPOP
DPYSL3
NFIA
LYPLAL1
STX18
CORO2A
CCN2
FAM149B1
ECD
WDR41
ARAP3
PHF23
DVL2
ADARB1
FAM227B
DTWD1
CHD1
PRUNE2
ZSWIM7
TTC19
TPM1
SLC11A2
KANSL3
FER1L5
GNL2
BCAS4
JADE1
CALM1
FOXP1
PIPOX
PDE7A
MRPL21
IGHMBP2
MRM3
GLOD4
SNCG
MMRN2
RAB23
ITGAV
SPRED1
LRRC8B
FDXACB1
C11orf1
LRRC3
SLC35G3
SRA1
FOXJ3
RCBTB1
ALKBH3
NRL
PCK2
GTF2H2C_2
GTF2H2C
GDPD2
FRG1
SNAPC5
TOMM7
STK26
SSBP2
LLGL2
FCMR
MTMR2
STEAP1B
UNC5D
PAH
RBM18
MRRF
MAML3
MTA3
DNAJB2
PARPBP
NUP37
MAD2L1
CEP126
ANGPTL5
NFKBIZ
HERC3
PYURF
PIGY
DR1
APOBEC3C
APOBEC3D
KCNB1
MAPK8
UGCG
CCDC43
TFAP2A
OCIAD2
RTKN2
C5orf24
NOTCH2NLC
CLDND1
EFHD1
TRPM3
SEC31A
UROD
HECTD3
FIGN
GART
TBC1D32
NEO1
MARCHF6
PSMB2
SNRNP48
F3
HASPIN
RBMS1
BEX3
ZC3H10
RPL41
UBAP2L
C1orf43
ECI2
SERTAD4
FGF6
HNRNPA2B1
CBX3
HMGA1
DUS1L
PIMREG
SMIM14
PSMG1
NPAT
ATM
ARHGEF5
NADSYN1
DHCR7
ANKRD18B
BRIX1
CAPZB
MB21D2
IL34
SPRY2
COL21A1
CDC42EP3
GRID2
SMIM8
RMND1
ARMT1
TBRG4
CCDC30
ZMYND12
PPCS
GABPA
ATP5PF
UNG
ALKBH2
OR2T1
LUC7L
STRAP
RRS1
ADHFE1
SOD2
WTAP
LANCL2
AMOTL1
RPS16
PIK3C2B
CALM2
SDHAF3
RWDD3
FILIP1L
WASL
ZNF202
CCDC200
SRSF7
WDR74
JPT1
ZBTB4
SLC35G6
POLR2A
CSRNP2
FAM53C
CDC25C
TMEM107
POLDIP3
MKNK2
MYLIP
BAIAP2
FSCN1
C12orf65
FAM43A
NXF1
SDC4
HSPA1B
TTI2
PRDX1
UBE2S
PFKFB3
UNK
VAMP1
POLR3D
RNF19B
PITRM1
KDM4A
INTS5
TRIM25
VASN
SERPINE1
NAGK
FUS
PLEC
MICALL2
DGAT1
FBF1
TOB1
BTG1
SOCS1
SIRT4
POR
DNAJB1
PLK2
EIF4A3
AFF1
NCEH1
SRSF3
USP42
GADD45B
PTPN6
C12orf57
ZDHHC4
HNRNPH1
LDHA
H3-3B
ARL15
H4C15
H4C14
SPTAN1
MTHFD2
TRA2B
IER3
TFRC
H4C11
RSRP1
SRSF6
PSAP
POLR2J3
FLOT1
SDCBP
TBC1D22A
ADCK5
EXT1
LRCH4
FBXO24
CYCS
SOCS3
BLOC1S2
TGOLN2
ZBTB45
KIF5B
HNRNPAB
TTPAL
POLG
PRRG2
NOSIP
SGF29
RBM25
DENR
DYNLL2
IER5
NEU1
SESN2
NARF
EIF4G2
IFRD1
C1QTNF6
PNP
DESI2
TUFT1
RINT1
R3HDM4
H4C3
H1-6
ORC5
UBE2D1
TAF4
SLC1A5
H2AX
ERRFI1
SQSTM1
RARS1
RELT
ZC3H12A
PABPC4
BSG
NANS
SKP1
FDXR
RPL3
TAGLN2
GNAI2
TATDN1
NDUFB9
ZNFX1
ATF3
DDX5
ZFAND5
DNM1L
NTMT1
MAT2A
APTX
TRIM28
FTL
SPPL2A
HBEGF
SLC16A3
BRMS1L
CITED2
DNAJB4
SLC38A2
PHACTR4
PDLIM7
RBM34
P4HA1
ERCC1
MLXIP
MGAT1
PTDSS1
MTERF3
HEXIM1
RNF14
KANSL2
NUDCD1
HEATR5A
DNAJA1
ARL6IP1
UAP1
PHLDA2
CDKN1A
CNNM4
IMPA1
TUBA1C
OAT
TRIB1
PLAG1
CHCHD7
ZNF248
ALG6
BBC3
SPRING1
RNFT2
KLHL12
ARL4D
USP45
SLC3A2
PPIF
SMURF2
NDRG1
TRAF4
DRG1
TNFAIP8
TMEM199
POLDIP2
ZBED8
NBN
ZCWPW1
MEPCE
SENP5
RPLP0
ITFG2
RND1
NET1
DYNC1H1
S100A13
SLC30A5
FARSA
CALR
PPP1R2
LOC100287896
LIPT2
METRNL
STIP1
RPL5
LRPAP1
SIL1
PPP1R3C
CSNK1G3
STK38
TUBB2A
INTS13
FGFR1OP2
TERF1
AMACR
TNFRSF10D
C2orf42
ASCC1
ANAPC16
SPIDR
B2M
IER5L
PTPRA
PPP1R12C
PARK7
CSKMT
C11orf98
NASP
GTF2B
SMIM12
AMD1
SERINC5
CEBPB
RHOB
NRBF2
XKR9
LACTB2
PTPN2
CCS
CCDC87
ZFAND2A
IRF1
FAM133B
OAZ1
MIGA2
SRP68
INTS6
WIPI2
HIF1AN
HLA-E
PUS7
GRB2
RNF135
FAM83D
GOLPH3
SGK1
RELL2
YWHAG
ZNF143
EEF2
IMPDH2
MYH9
CRISPLD2
TMSB10
EFR3A
CYP20A1
RAB11A
TSTD3
RPAP2
GLMN
PRMT9
GPR89A
THBS1
GPR89B
CAVIN1
RNF34
NFKBIA
RPL12
LRSAM1
RMDN1
TECR
DYNLL1
IQCD
SERTAD1
EHD1
PARP2
DBNL
KDM4B
SLC26A2
PRPF4
CDC26
RBMX
E4F1
DNAJC9
TNFAIP2
SWI5
GOLGA2
DUSP1
TBC1D31
NCOA3
MED17
FAM126A
UGP2
RIOX1
TAF13
XPO5
POLH
LRIG2
RIPK2
ADRB2
RBM6
PTPN1
BTBD10
AHR
ZBTB37
HDAC3
PPP1R15A
FBXW11
FER
PIEZO1
UBA2
STAT1
RASA1
TEKT2
ADPRS
STX10
IER2
SLC2A3
KISS1R
TMEM170A
C15orf39
EEF1A1
TMEM79
SMG5
HGH1
PSMD14
C19orf48
TAF12
ALDOA
TUBB4B
DENND6A
GOSR2
YLPM1
DNTTIP2
BZW2
ANKMY2
RBM14-RBM4
RBM14
SCFD1
COTL1
SLC8B1
TMEM151B
NFKBIE
FOS
ZMAT3
SELENOT
ATP5F1B
TEP1
CPEB4
TMX1
RPS3
SRSF5
TRIP11
GLS
KCTD7
NUDT15
LIMA1
TM9SF3
NPM1
HSPA5
DIMT1
RGS3
ALAS1
S100A1
ACER3
ICE1
SLC20A1
CCDC80
ACAP2
FBXW2
PDK1
ADSL
NOTCH2NLA
VCL
MFAP3
FAM114A2
ATP6V0C
AMOTL2
THOC3
FAM234A
NUFIP2
GALR2
TMEM249
SLC52A2
FBXL6
SEPHS2
DPY30
CZIB
JUNB
IPP
MATR3
RPL13A
SPECC1L
RUNX1
HRH1
AFG3L2
BCAR1
FAM220A
HMBS
CUL7
EIF3A
TPI1
RETSAT
CIRBP
ZCCHC24
NOTCH2
GTF2A1
SMN2
SMN1
FLNA
DELE1
ABTB2
TECPR2
CINP
HMGCS1
RIDA
POP1
DSCC1
CRLS1
SLC35C2
NCL
EIF4A2
TKT
WDR47
GTF2H5
MGRN1
ASH1L
GTF2H2
HERPUD1
BORCS5
CCNG1
C7orf26
FGFR1
PDZD8
TUBA1B
POLR2D
GSTP1
ZNF622
GBA
DNMT1
MSANTD2
ING1
AKAP1
RAB2A
CLIC4
TOB2
SLC16A1
ABTB1
SLFN5
TMEM138
CYB561A3
ZNF326
KLHL7
TAX1BP3
EMC6
SIKE1
TRA2A
KATNBL1
HSP90AA1
TNIP2
CSRNP1
MTRES1
DGKH
CNBP
PRPF39
JUN
RSAD1
LZTR1
SSNA1
ANAPC2
SAR1A
SLX1B
SLX1A
BOLA2B
BOLA2
C6orf89
GSTK1
TNRC6B
ERN1
MCL1
ATG16L1
SLTM
TMBIM6
STK38L
PSMD8
UCKL1
RND3
EPHA2
PCTP
TSPAN10
GLUL
KRBA2
ASPSCR1
ATOX1
ARPC1A
RABIF
MT1X
SNF8
SPATC1L
PLK3
MAPK1IP1L
BICD2
MKRN2OS
C6orf62
RBM12
PGAP2
CPNE1
LIN7C
NOL11
ENTPD5
CEP85
BBOF1
XRN2
SART3
ISCU
KCNG1
RAB6A
ZNF800
APPBP2
GNAI3
DENND10
SMAD7
TMED9
LATS1
ZNF468
EPHX1
TFAM
DCXR
ATP5F1E