ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116424 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◣ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
MTRNR2L2
MSH3
DHFR
HTR5A
MTRNR2L8
XKR7
IQSEC3
LIN28A
EPN1
RTBDN
NKX1-1
HPCA
NUP214
TUBA1A
RBM48
PEX1
ZNF335
INSM2
FAM24A
MICAL3
TDRD7
MTRNR2L9
RFX1
CPLX2
EIF2D
SFSWAP
L1CAM
SUMF1
PYY
NAGS
MTRNR2L10
SYT11
GON4L
FRG2
EPHA10
PDE4A
NACAD
SMIM17
RGPD2
RGPD1
RIMBP3C
RIMBP3B
NCLN
RIMBP3
TOP3B
CYB5R4
DIO1
MTRNR2L1
ZCCHC7
CHGB
MACIR
UBE2L3
TIGAR
PIN1
DLGAP3
RAB42
CACNG3
NBPF1
P2RX6
MAPK8IP2
CKMT1A
OSCAR
NDUFA3
PPIP5K1
CKMT1B
CELSR3
MANEAL
NPPB
UTP20
MFSD4B
NAGPA
BARHL1
PRAME
CLVS1
GPR158
SCG3
NUCKS1
FAM72C
COL23A1
NEU1
PSMD9
HPD
UFD1
CDC45
SHFL
SNAP25
TJP3
SDC3
GET3
MTRNR2L6
KREMEN2
GJD3
RTL10
GNB1L
PAQR4
TTC9B
EMILIN2
PICK1
ADCYAP1
MEGF9
USP30
SVOP
RBM19
TMEM181
ANK1
CIZ1
SLC18A3
CHAT
FIBCD1
USP35
KCTD21
GNB4
SPATA2
FBXO5
UQCR11
TRAF1
MAPK1
SCRT1
ANKHD1-EIF4EBP3
ANKHD1
TPBGL
PKDREJ
TTC38
TOMM22
DHX40
NEK6
GTPBP6
KCNH7
TEKT2
ADPRS
VPS37D
GPR78
CEACAM16
CRKL
ATL3
AANAT
UBE2O
SLC6A6
PGBD5
PPFIA3
C19orf73
RAB37
ZCWPW1
MEPCE
ACBD6
VARS1
TRMT1
NACC1
KLHL18
KIF9
WASHC2C
C1QTNF8
KIF18B
CYRIB
GFOD1
COL6A5
GTF2H3
EIF2B1
MRPL40
HIRA
FEM1A
MICALL2
UTP11
TSR3
GNPTG
TRIP13
BRD9
CASTOR2
CDKN1A
FNBP1
DYSF
CHRM4
GBA
NBPF3
PDE4C
RRM2
C6orf136
DNAJC11
SST
ADAMTS14
TSPAN13
YPEL1
ESCO2
LHFPL4
PCBP3
IDH3B
METTL2B
IER5L
UBE3B
LPIN1
SRGAP2B
FAM72D
TSEN2
DUX4
CRBN
MAMDC2
RAP1GAP
RFC1
CREG1
ARHGAP28
HNRNPD
WASHC2A
ANKRD36C
CTPS1
RRP15
C12orf66
ODF2
TMEM121B
RASGRP2
NUP35
VPS37C
ESYT2
SGSM1
RABIF
DPF1
RPA2
SYMPK
FOXA3
INPP5B
DHX37
BRI3BP
CDCA8
C1orf109
IL1RL1
SLC25A24
SRGAP2
FAM72A
QTRT1
TMEM199
POLDIP2
CCDC92B
KCNK12
SYNJ2
COASY
SPDYE14
SPDYE10P
WSCD2
SLC4A1
LCMT2
ADAL
SOGA1
DNAJC6
CDC7
TCF19
CCHCR1
BRAF
S100A8
EPC2
CBX8
NRCAM
BOD1
TIMM10
TRAPPC2L
GALNS
SPDEF
C15orf39
IL12RB1
ZC3H15
PHC2
TRAIP
VPS50
HEPACAM2
GPATCH4
TAS1R1
NOL9
NAT10
CDK11B
EML2
PPIL2
COLGALT2
CRNKL1
CFAP61
PAFAH2
NOP16
HIGD2A
KTI12
ACVR2A
SMYD5
CHST12
PIK3CD
MRPS26
GNRH2
ITPR3
HSD17B8
RING1
EBI3
ITGAV
ACE
CSRNP1
LRRFIP2
ALX4
SLC12A9
GRPEL2
PUS7
PDLIM7
KCTD15
GATA1
SPNS1
ASNS
RSPH14
RAB36
C8orf33
GPATCH3
ST6GAL1
CRYAA
CRYAA2
NBPF15
RABEP2
AMER3
BUB1B
AP3B2
TSTD2
NCBP1
ZBTB32
NOL6
CLK3
DNA2
CCDC116
FABP6
CBLL1
IBA57
OGDHL
CMIP
LRP11
SCGN
CASZ1
SRXN1
NTAN1
AKT2
APOA1
SLC27A4
HEXA
LTV1
PGPEP1
R3HDM4
DGAT2
KISS1R
GATB
XPC
LSM3
GRM1
DRD2
TADA1
TAP1
PSMB9
FUT11
SNAP29
PI4KA
LOC388282
LYSMD2
DRG2
RPP25
PMS2
AIMP2
MARCHF11
CD83
ZFYVE26
RAD51B
AEN
GADD45B
COPS7B
PSME3
THAP7
OXNAD1
DPH3
KLHL21
RCCD1
TMEM191B
TARBP1
VTA1
NMBR
PRRT3
KAT6B
UBIAD1
ZFYVE1
CRH
IQGAP2
SETD1A
C20orf204
PNPLA6
FAM78A
PYCR3
PMF1-BGLAP
PMF1
EXOSC2
CLN6
DGCR8
OAZ3
MRPL9
PPIA
SRRD
HPS4
CNNM3
SLC38A10
PERP
XRCC2
AGBL3
ZSCAN30
TRMT2A
RANBP1
PRELID2
AIF1L
NME1-NME2
NME1
THOC3
BCAT1
HSPA1B
STOX1
ALG1
CNOT4
CDC25B
FDX2
NFE2L2
CCDC200
SFT2D3
ATP5PO
FCHO1
DUSP1
NSMAF
GRIK1
PDE1C
IMMP2L
OR2L13
OR2AJ1
LUC7L2
ZNF596
FMC1-LUC7L2
FMC1
DGCR6L
SLC39A3
PWWP2A
PCNA
CERS6
UBE2H
FNDC10
ZC3HC1
VAC14
EPS15
STX7
KDM4A
ASCL2
CCDC69
PKD2L2
OGFOD1
NUDT21
DGCR2
PPM1G
RBSN
HNRNPLL
SRSF7
ARRDC2
TRAP1
ANKRD36B
VHL
CXCL3
SPATA25
NEURL2
CTSA
MIS18A
MRPS11
MRPL46
ADARB1
DOLPP1
RECQL4
LRRC14
COTL1
FOXD4L1
CARD11
VPS33A
ZDHHC12
FBXL12
ATP6V0E2
TTC26
GRWD1
KIF2C
HDAC11
GTPBP3
ANO8
SORBS1
CYP51A1
FAH
SMIM11B
SMIM11A
ANKRD63
SKA3
MRPL57
DCLRE1B
AP4B1
LINGO1
MRPL2
KLC4
SRGAP1
TMEM70
ELOC
CDC42BPG
BOLA2
EBNA1BP2
CFAP57
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
GTF3C4
DDX31
E2F6
TMED1
NOM1
MRTO4
EMC1
OPRL1
FBXO21
LKAAEAR1
RAB33B
GSTK1
SELPLG
NR2F6
TMEM242
MTFR2
YIF1A
TMEM151A
NUDT2
KIF24
PIGBOS1
PIGB
HRK
POLR3G
MBLAC2
PHF20
MYPOP
N6AMT1
TSEN54
CASKIN2
VPS11
DNTTIP2
JMJD1C
SAR1B
PIP4P2
KLHL36
TMEM191C
SUFU
ACTR1A
TMEM204
TRUB2
COQ4
KAT2B
NAGK
TCIRG1
AGPS
MISP3
KIAA0895
BIRC5
ANLN
SYNJ1
LCN8
MYT1
H2BU1
H2AW
LRRC8B
SDF2L1
TBX1
DHDDS
MFSD1
CDK11A
NSUN5
URB1
HLTF
LZTR1
RPUSD2
CCDC32
AQP11
OAF
GLRA1
EIF3H
OIP5
NUSAP1
CNTRL
C5
ZNF75A
TIGD7
POLR1B
PHACTR2
ZYG11A
CFAP73
PRSS16
PITPNA
SWSAP1
CYB561D1
XYLB
MYCL
MYLIP
NOB1
TMEM210
LRRC26
ZNF74
OXTR
GALNT2
CPPED1
AGK
XXYLT1
TNFRSF8
CHCHD3
TNFRSF21
ATE1
AKAIN1
VSNL1
KLF1
GCDH
CCT2
CENPE
ZNRF1
OSGIN1
TENT5C
MMP24
NSFL1C
PLK1
VPS35
COX14
HACE1
NAE1
C3orf80
TRMT61A
CPNE9
MYO18A
ZNF280D
EXOSC6
PAX4
DLK2
PAXBP1
FBXO4
SARS1
RNF141
ZKSCAN4
USP48
ZNF398
TMEM184A
SPHK2
RPL18
FAM83E
HACD3
GPC6
STIL
CRELD1
RARG
SRSF10
TMEM51
RNF187
MARCHF4
UTP25
C5orf51
COMT
WASL
TXNRD2
FRMD6
FAM181B
TOP3A
SMCR8
THEM6
TTF2
ANKRD36
GALNT11
ZNF595
B3GNTL1
CFAP298-TCP10L
CFAP298
SFT2D2
CBFB
TBC1D22A
DGAT1
RNASEH2C
PTPRB
CDKAL1
TRIM67
CREB3L2
GSDMD
ZFYVE19
DNAJC17
ANXA7
CFAP299
BRAP
ACAD10
ECI2
NUDT3
SNX8
TDRKH
DHH
GAREM2
ID3
PLD1
CMPK2
HEXD
GGCT
ITPR2
CENPN
BIRC6
PLLP
SSBP1
RDH5
ITGA7
BLOC1S1
QKI
RAB39A
H1-10
ZMPSTE24
ITSN1
CRYZL1
STX11
RTTN
OXR1
SDF4
B3GALT6
POLR2J
NOL7
SPOCD1
DMTN
GPATCH1
GTF2H4
SOD2
C16orf71
ANKS3
AKAP1
MCUB
C22orf39
ACAT2
SCAF11
RBM28
METTL1
EEF1AKMT3
CYP27B1
RAD51
GAA
SAMD13
GFI1
STK40
ZBTB16
GSN
RAB14
CAMTA1
ZNF555
ZEB1
KCTD18
POLR3H
FRG2C
ZNF77
TPH2
KXD1
ASMTL
STX16
NUF2
FANCD2
ASF1A
SLC35A4
APBB3
DNAJC5
SCFD2
NEIL3
ZNF581
TIPARP
POLR2J3
VIM
ARID3B
CCDC106
LARP1
FARSA
CALR
TTLL4
TRIP4
SPOP
INTS12
GSTCD
SMG8
D2HGDH
PDE6D
FAM227B
DTWD1
EIF1AD
BANF1
AHCY
NEUROD4
COMMD2
WASHC5
NSMCE2
IPO4
TAS1R3
COMMD9
TXLNA
FBRS
TBC1D19
PGAM5
NOL8
CENPP
CCNA2
GTF3C3
NUP107
ITGB3BP
EFCAB7
HMGB1
NEK2
P4HA1
SUPT7L
SLC4A1AP
HAGH
FAHD1
PEX3
ADAT2
WDR36
HDAC2
CDK5RAP1
RBBP5
IQGAP3
WDR74
EXO1
CFAP54
ATG14
POM121
CCNG2
TMEM248
STX18
TSFM
EIF3F
KCNB1
METTL15
KIF18A
USP54
COX16
CCDC107
SF3A3
UBFD1
EARS2
MTF2
MED23
PLEKHM3
SGO1
WTAP
KIF20A
BRD8
UNG
ALKBH2
TACO1
CENPF
FXN
CDT1
RABGAP1L
NCAPH
SEC24B
CSTF1
AURKA
HIBADH
RPS7
SAP30BP
RECQL5
RRP12
KDM2A
LRRC59
MRPL44
IFT46
GOLGA7
TIMM17A
ZNF830
CCT6B
NDUFS7
MTBP
MRPL13
DDX18
BEND3
TICRR
USP2
EBAG9
ZNHIT2
TRMO
CERCAM
CKAP2L
SEC31A
USPL1
KDM5B
STAT3
TMCO3
TATDN3
NSL1
DCUN1D2
WDR11
SEC13
ANKRD31
NUP54
FANCI
RPS19
PSEN2
ATR
NDUFS3
KBTBD4
THAP9
ADAMTS17
TRIM24
VPS9D1
PBK
RTN4
LAMP1
SNX1
CIAO2A
MTDH
ZKSCAN8
RGL1
DNPEP
PRRC2B
RTEL1
YARS1
S100PBP
POLR3F
DZANK1
RAE1
TRAPPC6A
BLOC1S3
TROAP
TM7SF2
CCDC86
PSMC2
DNAJC2
SLC25A51
SLC25A40
GTF3C5
DBF4
STMN3
ARPC5
ADNP
COMMD4
NSUN4
EDC3
ZAR1L
BRCA2
RRS1
ADHFE1
ZCCHC4
GDAP1
NLE1
MTIF2
CCDC59
ANAPC5
XKR9
LACTB2
SPG21
ATP5F1E
KLHL20
FAM207A
PKDCC
NOS3
SMIM12
RAD51AP1
C12orf4
TXNDC9
EIF5B
SEPTIN9
RAD54L
VPS29
RAD9B
SRRM3
CCDC88A
SELENOH
WBP1
INO80B
ARHGDIA
SNRPB2
MARCHF8
TMEM41A
HUS1
FAM133B
RNF166
DNAJC25-GNG10
DNAJC25
TEX46
KDM1A
HES3
ZFPL1
CDCA5
DCAF10
PPM1B
CNOT3
MXI1
ARHGAP45
PUS10
PEX13
UBC
BCAS3
PIH1D2
NKAPD1
KIAA1586
ANTXR1
MRM3
GLOD4
PFDN4
TTC27
YTHDF2
NUDT15
MRPL39
KRR1
MRPS18C
KLHL32
HELQ
CDC6
SMARCD2
TRMT6