ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026263 | Caco-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◣ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
NPY4R
NPY4R2
ZNF76
RBBP8NL
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
CHI3L1
GPR84
C20orf204
KCNE3
NEK2
PKDCC
CYP2R1
OR10V1
HK1
CEBPG
COL23A1
ACVR1B
HES1
CTSK
SALL4
COG1
RARB
TOMM40L
APOA2
FCER1G
KRT8
TMEM262
GFOD2
CD300LF
EML1
HOXB4
HOXB3
AKAP9
WDR74
STX5
NFAT5
JOSD1
HOXA3
SLCO2B1
RGPD2
RGPD1
ZNF341
NAV2
SERINC3
PKIG
MRPL44
CYTH3
MACC1
KRTAP3-2
KRTAP3-1
DUX4
PTCD1
CPSF4
STX16
ZNF503
ALG10B
ZNRF3
TSPAN3
TPK1
CD244
CREB3L1
XPR1
AP1M1
AJUBA
USH1C
OTOG
MRPL21
IGHMBP2
AFAP1
SULT2B1
APOLD1
EPB41L1
PMEPA1
LCT
GLYATL1
ARHGEF12
STARD10
ART1
MARCHF8
BAMBI
ZNF169
ZBTB45
SLC27A5
PRR15L
CDK5RAP3
PRELID3B
SLC12A3
CA4
HEXB
GNPAT
C1orf131
MYEOV
ISX
COL4A2
COL4A1
IL9
FAM111A
LECT2
PDGFRB
CDX1
STAT3
RHEBL1
KMT2D
STAT1
ADARB1
RGS19
OPRL1
LKAAEAR1
MEP1A
ID1
HEG1
BMF
HKDC1
PHRF1
SMIM3
PTPRN2
LRP2
GRAMD1A
LRIG3
TATDN3
NSL1
C1orf100
ANKRD40CL
RDX
S100A2
MALRD1
TDRD7
ALG10
CCT5
ATPSCKMT
MMP8
PDZRN3
CAPRIN2
KDM2B
GATA6
SLC2A8
ZMIZ1
HOXC6
HOXC5
DCAF6
ATF3
CDR2
NAALAD2
TAGLN2
FKBP1A
STX18
ZBTB38
MKRN2OS
MKRN2
RFFL
ADGRG7
CASC3
SLA
MGAM
NDUFS7
WWC2
FRG2
CHST7
ETFB
RALB
NUF2
ITLN2
B3GNT6
MOB4
TSPAN32
C11orf21
SPATS2L
LDHAL6A
TNFAIP8
NCOA5
KRAS
ANO6
C2orf88
ZFP62
BMPR1B
DDX23
LGALS3
TACR2
ATXN1
H4C12
H4C11
H2BC15
H2AC15
HOXB5
MORC1
EPCAM
ADNP
ATE1
MATR3
WWC1
UBB
DPP4
H3C15
H3C14
H2AC19
H2AC18
NTF3
CDK5RAP1
OSBPL1A
H4C15
H4C14
TUT1
MTA2
PTPN6
C12orf57
BCL2L1
OR10AD1
TOP3B
LIFR
TFPT
PRPF31
INTS5
GANAB
COL5A2
DDX59
MICAL2
MAGEA11
ADAP1
SKIL
AMACR
GSTP1
WASHC2A
CTSB
EIF3D
MRPS31
KAT6A
CCDC90B
REG4
EPHB2
RNPEP
TOB1
VILL
TMEM230
PCNA
ANKRD1
MAMDC2
FGG
SPOCK2
RAB3C
BANF2
GSG1
MRPS23
SPATA2
OR9Q2
LAMB3
BCAS4
PRSS23
POLDIP3
USP54
SLC33A1
IL1R1
ALS2
HERPUD1
ANKDD1B
AP3S2
IL37
PERCC1
PRSS41
CAPN2
TACO1
USP30
S100A10
CFLAR
TULP4
SLC7A5
HSPB3
PPP1R2
QSOX1
TMC7
DRD4
NOTCH2
PLEKHG3
GSTO1
RHOH
LAPTM4B
YAP1
MTRNR2L1
GTPBP4
CALM2
TRIP4
PCLAF
ALKBH3
SLC41A3
C4BPB
ATP5F1E
NXPH2
OSGIN1
GIP
SMG7
SNTB1
UBE2V2
PHLDB2
SBK3
TXNDC2
GTPBP6
FEM1A
PRR5
TSPAN13
ADAT1
GBA
PHF12
GARS1
BTNL8
NQO2
MUC3A
ZNF226
SLC7A6
ZC3H6
VPS9D1
ENTPD4
SIX1
ALDH5A1
TBL1X
SEBOX
TYMSOS
TYMS
LAMA5
VTN
SARM1
GPBP1
NRCAM
NAGLU
GAB1
WSB2
INTS9
HMBOX1
NFE2L2
ATP8B1
HEXIM2
EAPP
MTRNR2L8
ZC3H10
RPL41
ESYT1
CLTB
EPRS1
DCP1A
KPNB1
IKZF3
PNLDC1
PHYKPL
PPP1R14A
CEBPA
REG3A
OGT
ZBTB7B
LENEP
TOB2
GTF2H2C
GTF2H2
CLDN9
CLDN6
INAVA
STK32C
LRRC27
P4HA1
LRP6
NDUFAF5
ESF1
SLC25A44
SP2
SYNRG
COL21A1
USPL1
HMGB1
INTS12
GSTCD
KANSL3
FER1L5
SLC2A9
ZNRF1
WDR59
DPY19L4
CRBN
PHIP
TTI2
NNMT
ZC3H15
PDZK1
CD160
OTUD7B
ZKSCAN2
TMPRSS4
SMIM35
BBS1
TSSC4
GTF2H2C_2
SLC4A8
GALNT6
ADPGK
FCRLA
PRRT2
MAZ
TSFM
ARHGAP45
DOCK6
SNX5
MGME1
TGFBR2
NUDC
NR0B2
BIN1
FBXL17
BTNL9
TBX4
SELENOH
ASXL1
AFG1L
H2BC14
H2AC14
UBE2Z
XPA
CLDN18
FABP7
PRSS33
TM9SF4
MARCHF7
PCID2
CUL4A
GFRAL
CLNS1A
MIA3
NDUFV1
SLC19A3
CCDC88A
ANKFN1
IRF2BP1
MCM7
AP4M1
EIF4H
RTN1
CIAO3
SP5
BANP
MPZL3
LRMDA
ELF3
LYPD6B
CCAR2
C8orf58
HNF4A
SLC20A2
SMIM19
CCNDBP1
PEX3
ADAT2
RAD51AP1
GZF1
C12orf4
PTEN
KLLN
JAML
GPATCH1
PDE6A
CKAP5
CYCS
CHMP3
GTF2IRD2
ZNF335
PLCB1
ACOX2
INTS4
SIRT1
OGA
RAB18
TMEM248
SUPT5H
RPS16
FGD3
TSN
PMS1
ORMDL1
UBR2
TMEM60
PHTF2
IST1
FAM91A1
MRPS33
BCAS1
PTPN4
CALM1
COX16
ZW10
CLDN25
KMT5B
ERMN
SCGB1A1
SELENOW
KRT18
C6orf226
BCAP29
SRSF6
TMEM229B
PLEKHH1
GTF2IRD2B
CCDC200
ABCB1
CXCL9
ART3
PLAUR
HOXB9
DUT
NFKBIZ
HOXA4
ARL14
CERK
HOXA6
HOXA5
TMEM107
HOXC4
HOXB8
HOXB7
TFAP2A
SFRP2
ABR
LRRC19
DESI2
CEACAM5
PLS1
GUCY2C
SLC30A10
FCAMR
PRLR
FHL2
C1GALT1
HOXC8
SLC6A7
ZNF91
IZUMO3
LOC102723996
ICOSLG
TRIM2
SPATA46
C1orf226
HNF4G
GINS1
ABHD12
DCAF8L1
UGT1A1
TBPL1
TATDN1
NDUFB9
LRRC69
WBP4
ELF1
PIGR
FBXO31
GPA33
RHBDD3
EWSR1
AP2S1
SPAM1
RAB6D
RNASE6
DTHD1
CABLES1
SPRED2
DEPP1
CDC14A
RGS2
SLC25A27
CYP39A1
PHLPP2
FGFBP1
TSPAN8
FLNB
KIAA2012
STIL
ARHGAP35
DENND1B
AKNAD1
ARHGAP32
RGMB
MAP3K14
PTCHD1
TTC13
LAMTOR4
PCED1B
C17orf78
AMIGO2
TMEM106C
ZNF608
RIN2
CEACAM16
RNF114
CDH17
QSER1
NOS2
THUMPD3
KIAA1217
ITPK1
SLC45A4
PITX3
GBF1
CNGA1
MYOF
CCDC7
C3orf52
GALNT5
ATP10B
PFKP
CLRN3
UGT2B10
SH3D19
GPR160
FUT4
TNFSF15
RBM47
RPUSD4
FAM118B
EPAS1
PLRG1
FGB
TGFBI
WHRN
MUC12
RAMP1
MPV17L2
IGFL4
LRRC4
ZZEF1
CYB5D2
H3C7
H2BC9
IQGAP2
VSX1
CELA3A
EIF4G3
SIPA1L2
DUS4L-BCAP29
DUS4L
COG5
GEM
SYBU
FCER1A
NSMCE1
NRARP
HEPH
ARHGAP17
CHMP5
BAG1
CASP4
WDR77
ATP5PB
ZNF3
COPS6
DUSP18
TSNAXIP1
RANBP10
SURF4
PTPRF
ABLIM1
MEIS1
TES
AFF1
SIRT4
TMCO3
SNX30
DCUN1D2
NIPAL1
HOXC10
SERPINB1
KIF16B
SLC17A4
MAVS
SLC20A1
SEMA3C
DNAJC25-GNG10
DNAJC25
DNASE1
SOAT1
ERLIN2
ROCK2
GALNT11
RBM25
GSN
ADGRE5
MYRF
CLDN12
MGAM2
CXCL5
PDE4D
ZNF563
MYO18B
RNF183
ADD3
SCT
IRF7
CDHR5
MRPS10
CHST5
SEC23A
NBPF1
USP7
IFI30
GCNT4
HESX1
APPL1
RAP1GAP2
LAMA3
TOR1B
STK11
ST6GALNAC6
ST6GALNAC4
LRRC66
GSDMB
KIF5C
CDK11A
LGALS4
HSD17B4
MCTS1
MROH7
MLEC
WASHC1
HOXC11
UGT1A6
KRTAP9-1
PAPSS1
GGH
GCG
CMPK1
NXPE2
CDX2
TM4SF4
PIK3C2A
RBCK1
IQGAP1
C3orf85
RARRES1
NWD1
MBNL2
PPARG
PLEKHM3
MIDEAS
ADGRF4
SCGB1D1
IL34
CRYBA4
ETV5
ANK3
CDK11B
KRTAP4-2
KRTAP4-1
HNMT
PGP
E4F1
TMIGD1
NAPEPLD
EPC1
TRPC3
SMAD5
JAGN1
CIDEC
ZSWIM7
TTC19
TMEM54
PAK1
SLC1A1
TXNDC8
REG1B
TMEM45B
SERPIND1
KRT39
EPS8
WFDC9
WFDC10A
ARHGEF10L
VAV3
RGS9BP
ANKRD27
LRRC18
CASP5
ATP9A
WDR36
SRPK2
SOX30
C5orf52
HSD17B12
KLHL30
CACNA1D
TPD52
NNAT
BLCAP
TMEM87B
TMEM69
GPBP1L1
MAP1LC3B
PTK2B
FCMR
CREB3L3
SRGAP2
INPP1
FAM72A
RNF186
RNF145
AKR1C3
SAR1B
IL33
FURIN
RPSAP58
LIMA1
SLC12A2
ENGASE
RGPD6
TAF12
IGSF23
TDRD1
CCDC186
FABP1
SGK3
PRSS3
HOXC9
CALML4
ATP2B4
TARDBP
PRKCZ
B3GNT5
CXCL2
SLCO4A1
PRICKLE1
RAB14
DEK
C19orf33
HACD2
BRMS1
B4GAT1
KRT19
DENND1A
ACAN
SLC25A13
RFLNA
PHF19
NPIPB5
MYC
PLAAT2
HOXA9
HOXA7
FAM72C
P2RY1
LIPH
SLC35A3
MYH4
GDA
ARHGDIB
TNFSF11
PRR5L
NR5A2
ARHGAP27
SRGAP2B
GOLIM4
FAM72D
PKP2
NPIPB4
NPIPB3
IGFN1
ANO4
RHOBTB1
LOC388282
KIFC3
SGCB
MLF1
PPP1R12A
KCNK1
FAM107B
SF3B4
RNF43
PLBD1
MTMR11
CRYM
ARHGEF18
NEU1
TMEM186
PMM2
NXPE1
PADI2
FAM131B
ARNTL
CAPN5
FAM177A1
FOXN3
PPIL3
NIF3L1
LDLRAD4
RAD54B
LRRC59
KRT20
FSBP
DHRS3
COX20
ST3GAL2
FCSK
GRAMD2B
ME3
CLIC5
SLC7A13
ZCCHC14
PLEKHG1
JMY
POLD4
PPP1R14C
TESC
CARD10
IFRD1
FAM53B
PPM1A
PIK3R1
NSFL1C
MLLT3
H3-3B
B3GALT2
SLC4A9
NT5DC4
LRRC31
WDR91
CNNM3
NOSTRIN
SYCP2
PPP1R3D
FAM217B
ZMPSTE24
SLC3A1
PRAG1
MGAT4A
MTCL1
EBLN2
STX1A
CYTIP
SFR1
SEMA6D
PDXK
MAPK10
NPIPB13
NPIPB12
PAX8
CAST
ZNF721
TCF20
PRDM4
PIGG
NGB
CPLX2
VPS13A
SLC12A7
LASP1
CLDN4
KMT2E
USP6NL
METTL15
KIF18A
TGIF1
PES1
TXNRD1
RGPD8
RGPD5
CLOCK
CELA3B
AHCYL2
SCAF11
TESK2
MMACHC
GDF15
CCDC163
GGT1
FOXB2
PCK1
MLPH
CEP126
BTNL3
ANGPTL5
AMBP
UTS2R
TEX19
RNF24
RASA1
LIMK2
TRIM15
TRIM10
TMEM141
INTS8
CCDC183
TAS2R41
IRF2BP2
IRAG1
CMTM2
CMTM1
CACNB2
ZSCAN9
HDHD3
CACHD1
ZNF248
TBC1D30
GNA14
FUT2
BMP3