ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC6 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC6's Target genes

◣ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ HDAC6: STRING

MTRNR2L1
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
MTRNR2L8
MTRNR2L10
MTRNR2L9
EMILIN2
MAMDC2
EPN1
GTPBP6
COL23A1
MTRNR2L6
CRYAA2
CRYAA
SPAAR
CNOT3
CDH11
LGR6
DUX4
FRG2
WDR74
POLDIP3
C3
KRT36
ZNFX1
TMEM107
PMF1-BGLAP
PMF1
EEF1A1
C1orf198
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
EIF3E
FUS
B2M
HSP90AB1
MEIS1
ANGEL1
SRSF2
MFSD11
ACBD6
OPRL1
MICAL3
LKAAEAR1
GTF2B
H4C11
FIBCD1
RUNDC3B
H2BC12
H2AC12
RAD23A
TUBA1A
NUP214
SIRT4
GJD3
H4C12
RPL27
PAX4
DYSF
COL6A5
SRSF7
PRDX1
TRAF7
MRPS18B
ASXL1
H2BC11
H2AC11
RPS27
RAB13
H2BC21
H2AC21
H2AC20
NME1-NME2
NME1
JUN
DDB2
RPS29
NGB
TSPOAP1
H4C3
H1-6
PCGF2
NCOA7
BRD2
POLR3E
NAT10
RCC1
PMAIP1
HRK
CASZ1
DDX5
CALM2
ADARB1
USP53
CCDC200
PLEC
MAGOH
AMD1
TUBB4B
TMEM238
RPL28
ESYT2
SESN1
SOCS3
RANBP2
SPATC1L
ARRDC2
RPS20
TTI2
RPLP1
PHACTR2
ZC3H10
TFPT
RPL41
PRPF31
LY9
SSNA1
RPL10
ANAPC2
RALGDS
SNX5
MGME1
LETM1
GIPR
PREX1
CSRNP1
NDUFS7
MNS1
LUC7L2
FMC1-LUC7L2
FMC1
BTG1
IFRD1
CWC25
RNF149
SP2
ZBTB4
SYTL3
SLC35G6
POLR2A
MAP3K14
MFSD4B
H2AX
RASA3
HNRNPA1
CWF19L1
CBX5
FAM53C
CDC25C
THBS4
RPTOR
MTX3
H2BC5
H1-4
RPL29
H4C2
H3C2
H2AC4
ASB2
PHF19
AMZ2
MRPL44
SLC43A3
C20orf204
STX11
PSMD9
HPD
JUNB
ZBTB37
MAPKAPK5
H2BC8
H2AC8
DLG2
TAF12
SH2D2A
NTRK1
IRF9
DEF6
BCAR3
IL1R1
FOXO1
TPD52
EIF4G2
TRMT61B
HAX1
DENR
NPAS4
ITPR3
CLK1
AP3S2
ZBTB40
IRF1
BCL2A1
NUP62
IQGAP2
IL4I1
GADD45B
ATF5
SLC7A5
ASCL2
RPS6
FASLG
SSBP1
LTA
TMEM210
LRRC26
NUFIP1
NOP58
GPALPP1
NOLC1
METTL26
CD226
CAMLG
HERPUD1
VPS72
FCMR
SACM1L
POFUT1
PLAGL2
PIEZO1
MRPS23
CKS2
TRIM2
SCML1
PLAGL1
ZZEF1
SRGN
ID1
CYB5D2
UNC45B
RPL10A
ATP5MC3
IL21R
CCNL1
ARID5B
PCNA
KMT2E
TUT1
RSRP1
REV3L
RANGAP1
STOML2
RUNX1
MRFAP1
CSTF1
AURKA
APTX
TNF
RPS13
GPR84
ENO1
CDC42
ID2
TLE3
SAR1B
NKAIN1
CENPM
PTBP1
GALK2
DDX19A
COPS2
STK40
SLC3A2
RRM1
RPLP0
RPL23A
RAB7A
RAB34
NR1H3
ITGB3
ILF3
EEF2
ACP2
EGR1
WBP1
OXSM
NGLY1
MRPL24
ITGAL
INO80B
DNAJB1
DCP1A
TMEM79
STX10
SMG5
RPLP2
PIDD1
IER2
FBXW9
EIF1
CBX6
MTF2
MMACHC
HPS5
GTF2H1
CCDC163
C16orf91
RSL1D1
HNRNPH1
DNAJA3
NSA2
MBOAT4
GSDMD
GFM2
EHD4
SRSF1
RAC2
NOC4L
DNAJC16
DDX51
CASP9
ANAPC10
ABCE1
NEUROG3
METTL16
ITPR1
CCDC91
UBE2I
SDCBP2
RNF167
PFN1
YARS1
S100PBP
KCNAB2
GNG3
EIF4A1
BSCL2
ZNF79
XPC
TXNRD1
RPL9
PRMT5
MRPS14
LSM3
LIAS
IER5L
CAPN15
ZNF132
PPP4R3A
PGAM1
NAA16
MTRF1
GABPA
EHD1
ATP5PF
APOBEC3A_B
APOBEC3A
ZNF526
NABP1
FBXL22
DEDD2
BTF3
TBL1XR1
DDIT4
CXXC1
TRAF2
SFPQ
NUP54
MYL6B
MAP4K1
EIF3K
DPP9
DENND1B
DDX21
C2orf42
SRSF5
NANOS3
H4C1
H3C1
H1-1
FAM102A
HNRNPUL1
H4C4
RBM3
TRA2B
THADA
TCAF2
SPAG7
SIRT6
SH2D1A
CDV3
ANKRD24
AIM2
SLC1A5
MTHFD2
ATF3
OR2T1
ISG15
FBXO31
AGRN
TSSC4
RGL4
PIK3CD
YTHDC1
RPL38
RBM17
ONECUT3
OCIAD1
NR4A3
MORC3
NOB1
SF3A3
PAFAH2
MITD1
MAK16
LYST
SEPTIN7
RMND1
NUFIP2
FADD
ARMT1
PKNOX1
LARS2
CDK12
C8orf37
NDUFB5
MRPL47
MAP3K7CL
CHPF2
CCT8
RBMX
HNRNPA3
RPS15
MYO9B
HSP90AA1
HAUS8
SLC12A6
SF3B1
RPL15
RPL12
RGPD8
RGPD5
PURB
PPP1R15A
NUTM1
NOP10
NKIRAS1
LRSAM1
IL23R
HNRNPAB
CHD8
WDR4
TCTA
RHOA
EIF3J
BANP
TNFSF14
SLFN13
SKP1
SAMD4B
MKLN1
LSM5
CITED2
AVL9
ZNF101
WDPCP
TRMT2A
SHH
RANBP1
RAB6A
MDH1
ETFBKMT
ATP13A1
ZNF655
SCAF11
RBM18
POU2AF1
MRRF
MRPL55
LRRFIP2
KIF15
KIAA1143
HEXIM1
CPNE5
COX5B
AMY2A
SLC25A51
CLN3
B3GAT3
APOBR
ZNF106
SPRYD4
SNAP23
RPL22L1
C19orf48
RETSAT
CD209
ASXL2
TMEM101
SNX9
RNF213
NLRC5
KRR1
GPN2
CCDC107
TSPYL2
PPP1R8
MSL2
METTL3
LRRC61
LONP1
CCNT1
CATSPERD
ACTR3C
TMEM259
RHBDD1
PNP
COX8A
CNN2
SH3BGRL3
PPIL4
DNAJB4
ZNF207
ZMPSTE24
TXN2
SUPT5H
STT3A
SNRPE
SHF
RSL24D1
RPS2
RNF151
RFFL
MOK
LAX1
H1-3
GFOD1
ENOSF1
EFNA4
CCM2
ALG10B
AEN
SHISA5
RPF2
MRPL45
GTF2H3
EIF2B1
TRAFD1
TOGARAM1
SERP1
SEMA3B
RPS12
RBM25
NOP16
KSR1
KMT2D
KLHL28
HIGD2A
FURIN
EIF2A
CD69
CASP8
BTRC
ZNF764
SCAND1
LMNA
IMPDH2
IER3
HMGN4
FLOT1
DNAJB2
TBRG4
SERBP1
PRRC2C
POLA2
OSM
MBD6
FAM241A
DDIT3
CAMSAP1
AP2B1
ALG1
ZNF320
PLEKHA4
PLD6
ATP5MC2
ZNF3
VTA1
UNK
RRNAD1
NMBR
ISG20L2
H3-3B
DDI2
CRADD
CCR7
ATG5
TATDN2
SPHK2
SPG7
SLC2A11
RPL18
NCK2
ITPRIP
ITFG2
GTF2IRD1
FAM83E
VMAC
TRAF5
TMEM70
TCF7
PRPF19
NECAP1
NDUFA11
IER5
H2BC4
H2AC6
FOXD4L1
ELOC
TAP1
SPATA5L1
RPS16
RPL14
RNF224
RNF208
QTRT2
PSMB9
MRPS7
GGA3
GATM
DUS2
DDX28
CYSRT1
CIRBP
CCDC191
CCDC174
ANGPTL4
NASP
MCCC1
IARS1
HSD17B12
H3C13
H2BC18
FAM227B
DTWD1
COG3
ASB8
ADORA2A
SENP8
RPL34
PITPNM1
NRIP3
MYO9A
MAP2K7
KIF26B
BORCS5
TMF1
SLC26A2
PPME1
MORF4L1
CD55
CCAR2
C8orf58
C2CD3
ZNF688
WDR19
THOC1
MZF1
CHST11
ARF4
TUBA1C
PPM1K
NPM1
METTL1
KANSL2
IPO7
GOPC
EID2B
EEF1AKMT3
CYP27B1
C1orf53
TOMM5
TICAM2
RPS3A
RBPJ
N6AMT1
DSTYK
CLP1
CD96
TAF1D
OXCT2
GTPBP10
FBRS
C11orf54
AMN1
XRRA1
VASP
SPCS2
SMIM12
SACS
RPL13A
RPA2
NXF1
NACA
MACO1
LRP8
LBH
IL10RA
HM13
HIBADH
ABCD3
SNRPB2
SF3B5
MORN3
IFNAR2
DYNC2I1
APOBEC3B
RNF126
PRRT2
PNPLA8
PAGR1
MVP
GPR68
EMP1
DDX18
CLK4
TOMM20
NFKBIL1
FAF1
ERLIN1
DDX39B
ATP6V1G2
ZFC3H1
TOMM6
TMIGD1
THAP2
SLC30A6
SLC25A23
SEC14L1
HILPDA
CRB3
ACTR1B
PTCD2
POLG
MYO18A
MRPS27
MLH1
GPR183
EPM2AIP1
NOL7
NFU1
LSM14A
HSPA1B
CAVIN2
USPL1
SARAF
NFYC
MKRN2OS
MKRN2
LONP2
INSIG1
HMGB1
G3BP1
EIF4B
ABCC11
ZNF589
UQCRC1
SLC30A5
SLC27A5
SLC25A45
PARP2
MFSD8
MED18
MARS1
LDHA
FRMD8
FBXO4
FAM78A
ARHGAP9
ABHD18
SETDB1
PPAN-P2RY11
PPAN
NDUFB6
MIS18A
MAP1B
ELK4
CTDSPL2
ANGPTL6
TSACC
RBM7
PRDM1
P4HA1
MRPS15
MAT2A
GPR137
GOLGA5
CCT3
C11orf71
BCL9
PDCD1
PBRM1
NUP42
NME4
NAGK
KXD1
GNL3
EPC1
AP4E1
ACE
ZNF248
SLMAP
SLC25A25
PREPL
EBAG9
COMMD9
CAMKMT
WDR76
VPS35L
USP48
TOMM40
MFAP1
DUS3L
CUTC
COX15
PSMB10
NDUFAF5
GNG8
EXOSC5
ESF1
ESCO1
CTRL
CDK13
C9orf72
BCKDHA
TRAPPC4
THOC5
RPS25
MAP2K3
CSNK1A1
TAMM41
PSMD3
IL7R
HIVEP2
EVL
DPP4
TMEM51
RAB18
NIP7
MLLT6
LOC100289561
LARP1
HBS1L
GATB
EIF3D
CREM
COG8
TRMO
RRM2
PXMP4
PPP1R15B
POLR1F
NUF2
NSRP1
MIDEAS
HINT3
HDAC4
DISC1
WRAP53
VMP1
TP53
RPS8
PTRH2
GTF3C2
VCPKMT
TSN
TBC1D22A
RNF139
RCAN1
LYL1
IPO4
GUF1
CD247
ABCA5
ZNHIT1
SNX17
SAFB2
SAFB
RPL5
PLOD3
NR1H2
MACIR
ITGAV
ELF2
EIF2B4
CACYBP
UNG
SPTBN4
RIMBP3
KIFC1
FASTKD2
COMP
BLVRB
ARHGDIB
ALKBH2
SLC35A4
NUP205
COMMD1
CHFR
CCT4
APBB3
TSPAN5
TRMT112
PRDX5
MFSD14A
KIF11
COPS4
CLN5
CCDC115
ARIH2
SCAMP1
PTK6
PPP1R11
PMS2
NOL11
CEP350
AIMP2
ZCCHC7
TRMT10C
PISD
PHB2
IFT172
FAM122A
UPP1
LOC102723996
LEO1
ICOSLG
APOL2
VPS29
RAD9B
RABGGTB
RABGGTA
CYFIP2
CDKN1A
ADAP1
TMEM186
STT3B
PMM2
ZNF33A
KMT2B
SCGB1C2
PDE4A
WNT7B
STX4
KNTC1
HEMK1
FAM71D
C3orf18
TMEM248
SRSF4
RNF34
GPN3
FAM216A
UBE2L3
THRAP3
RIMBP3C
RIMBP3B
PABPC1
MRPL53
MBD1
HTR5A
CFLAR
BORCS6
TM9SF4
GRPEL1
RPS24
POLR3A
MRPS16
AARSD1
ZNHIT3
TMED5
TBX18
CCDC18
TCTE3
ERMARD
AASDH
THEM6
RBSN
TCTEX1D2
DCLRE1B
AP4B1
UTP23
ATAD2B
PPP2R3B
NFATC2
CNKSR3
SRRM1
ARL6IP1
ALX4
CLUAP1
C16orf90
LHX2