ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX768290 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◣ SRX768290: HT-29

◢ SRX359919: LoVo

◢ SRX1510444: VCaP

◢ SOX9: STRING

POR
IQCH
AAGAB
PARK7
POLG
SNAP29
PI4KA
PPIB
TAF15
SLC35E2B
CNOT6
MRPS24
AKIRIN1
ARRDC4
PFDN4
TMEM160
NOP56
DOLPP1
UBE2C
ZBTB32
RNASEH2A
PRDX2
PRR19
PAFAH1B3
PROSER3
HSPB6
PTOV1
MYO9B
HAUS8
DLST
SLC35E2A
WASL
OGA
MAGIX
PHRF1
HHIPL1
CCDC85C
UBA1
PITPNM1
CDON
GNB2
ATP6V0C
STIP1
CIC
ZNF775
RPL35
ARPC5L
ATG101
ZNF8
PRKDC
MCM4
ETV2
COX6B1
RASSF7
LMNTD2
PDXDC1
KHSRP
EED
MBLAC1
ZNF335
DBP
SELENOW
DNMT1
UCHL3
COMMD6
PRKCI
RAB4B
MIA
BZW2
ANKMY2
HNRNPL
TMEM45A
RNF13
WDR97
MAF1
RHBDD3
EWSR1
CDCA7L
PAXIP1
PRR3
GNL1
WDR74
TRAPPC6B
PNN
TANGO2
ARVCF
RMND5B
CNOT3
TEPSIN
NDUFAF8
USP15
GIT2
ANKRD13A
UIMC1
LIN54
PIK3R3
ZMYM2
CCNL2
NDST2
TBC1D17
AKT1S1
SHKBP1
TARDBP
TOP2A
KAT7
DPP9
PTP4A2
ANP32A
DNAAF3
CNOT1
ARAF
PPP5D1
CALM3
EIF3B
CENPE
ANKRD12
BRICD5
PGP
ARNTL
PPP1R13L
POLR1G
DISP3
SPATC1L
FRAT2
TTC9B
CCNP
SP2
TSKS
AP2A1
PSPN
ALKBH7
MRPS11
MRPL46
LEMD2
TIGD5
EEF1D
UROS
BCCIP
FANCI
HDAC1
UBE2A
CENPN
PTDSS1
MTERF3
NCDN
KIAA0319L
C6orf226
FUS
PPDPF
FRAT1
CDC25C
FAM53C
PRDM10
MYL12A
NUCB2
SERTAD1
HMGCS1
SYVN1
ZNF519
PRKAG2
PIP4K2B
FAM83D
FOS
TCP11L2
SKA2
PRR11
ANKRD39
ATP5PD
MYT1
RPL19
CACNB1
ATG16L2
RBM42
UFSP2
C4orf47
IQCE
RNF103-CHMP3
RMND5A
TRAF2
OSBPL2
ATP8A1
YY1AP1
DAP3
SSNA1
ANAPC2
MADD
PSIP1
SOD2
NR6A1
ISOC2
KATNB1
LUC7L2
FMC1-LUC7L2
FMC1
UFD1
CDC45
INAVA
HNRNPUL1
UQCRC2
GIPC1
CSPP1
COPS5
HDGFL2
LRCH4
FBXO24
CDK16
NLK
PCLAF
DGAT2
SLC25A42
GTF2IRD2B
GTF2IRD2
LRPPRC
STX16
PANK2
KMT5C
BCL6
EFNB2
ZMYM5
SRI
MOCS3
DPM1
PMVK
CSNK2A1
DOHH
ATP5F1B
TSPAN4
POLR2L
PDK2
FOSL1
UBE2B
CDKL3
UQCRQ
GDF9
C2orf42
CKAP5
KIF1B
MSANTD4
HOMEZ
HNRNPA1
CBX5
ALDH4A1
TMTC4
VBP1
TTBK2
RPN2
MROH8
RRBP1
TUBB4B
OPA3
MTCH1
PRCP
DDIAS
PIF1
DOT1L
HDAC2
RPL22
WDR45
RNASEK
C17orf49
AK2
WASHC5
NSMCE2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PRMT1
DIAPH1
RAB7A
RLN2
PLEKHG5
KLF6
COQ8A
TMEM218
CDK5RAP2
FAM72C
FAM72A
ATP5MC1
IFT52
FANCF
FAM72B
ZNF574
CD164
MYL12B
LIPE
PMF1-BGLAP
PMF1
HRC
RBM27
ZSWIM1
CDIPT
PTCD3
POLR1A
PRR14
USP31
FBXO5
CHCHD6
KCTD7
LSR
SELENOH
NOL8
CENPP
GNG3
GATAD2B
BSCL2
PNKP
OSBP
PKNOX1
SMC3
PRKACA
CENPA
HNRNPC
C7orf57
WDR62
THAP8
PLXNA3
LRRC61
ACTR3C
TTLL7
ZFAND3
PRRC2B
CANX
SIRT2
NFKBIB
SS18
RUVBL2
GYS1
SETD5
C6orf62
MYH14
MTMR12
ANKRD17
FLCN
TPBG
ZSWIM4
ZNF219
TMEM253
SLC46A3
FAAP24
CEP89
C21orf91
CWC25
DGCR8
SPATA17
OXR1
GPATCH2
METTL25
CCDC59
ZNF564
ANKZF1
RLN1
UQCRH
MAOA
LRRC41
NOCT
UNG
ALKBH2
ABTB2
ZNF687
CCDC102A
SIGMAR1
OGDH
NDUFB1
CPSF2
MGRN1
H2AZ2
ACTN1
FAM72D
IVD
SRPK2
RITA1
DDX54
MIA2
DCUN1D4
PXMP4
ACAP2
SPRYD3
LENG1
DRAP1
C11orf68
JPT2
PTCD2
MRPS27
MRPL21
IGHMBP2
RAVER1
SLX4IP
MKKS
RFX1
YJU2
ATG9B
ABCB8
PLAG1
CHCHD7
ZNF484
PRKCZ
YIF1A
UTP18
TMEM151A
MBTD1
CCT5
ATPSCKMT
MAP1LC3B
FBXO31
MTRNR2L2
MSH3
DHFR
TADA3
ARPC4-TTLL3
ARPC4
TBL3
SPSB3
NUBP2
MIA3
METTL3
EIF3F
PPFIA3
LIN7B
C19orf73
SUPT4H1
AFF1
MRPS31
STRIP1
TYK2
PSPH
CCT6A
MTMR14
ENPP5
SMARCAL1
PPWD1
CENPK
MPHOSPH8
FASN
ZFAND4
NFYC
FAM110A
DNM2
CEP164
TBC1D10B
MYLPF
POLR2J3
ZDHHC5
SAP30L
P4HB
SLBP
KLK6
CNPY3
ATP5IF1
SREK1IP1
CWC27
ZNF77
SASH1
TSR3
SRXN1
SPAG7
GNPTG
MZT1
BORA
ZNF92
BCL9L
TINAGL1
TDRD7
STK35
PER1
MAT2A
SIPA1L2
NECTIN3
FAM20B
ARHGAP19
TMEM94
PAIP2B
F11R
GATAD2A
PAK4
RECQL
GOLT1B
VDR
CXorf56
TOMM40
EIF4A1
ANKHD1-EIF4EBP3
ANKHD1
KCNAB2
RAB1B
CXXC1
BAZ1B
TRAPPC9
HSP90B1
FLAD1
FCHSD2
SP1
SRM
DAZAP2
LAMP1
ZSWIM3
FRMD6
ACOT8
TFPT
PRPF31
BCAS3
DYNLL1
RRM2
GOT1
KLF5
TOM1
RAB28
HNRNPAB
G3BP1
NAGPA
TPRN
TMEM203
NDOR1
RNF6
PRKCSH
CCDC151
RBBP6
RAB40C
RAB40B
TRIP4
PABPN1
PPP6R3
CDT1
ING1
MED23
HIBADH
LANCL2
MAMSTR
FBXO33
ASH1L
TCERG1
TMEM260
ZBTB3
SF3A3
KANSL1
FAM227A
CBY1
LAPTM4A
HBP1
GTF2H2C
GTF2H2C_2
MORN4
SLC25A38
ACAT2
ZNF175
RHPN1
GOLPH3L
FSIP1
KAT6B
AKT2
PACSIN2
TOM1L2
DRC3
BCL2L1
CUL2
COMMD9
ENSA
ZNF138
SMARCD2
FAM156A
PPP2R5A
PSMA7
PRR25
MTRNR2L8
MCM10
RALY
TNRC6B
GRIPAP1
USP3
UGP2
RCN2
DYRK1B
TMEM242
NARF
ZNF273
TMEM199
POLDIP2
PCYOX1L
EIF2AK3
BZW1
GTF2H2
PRR12
CDCA3
ZFAND2A
TK1
AFMID
RNF5
AGPAT1
SDF4
RBBP8NL
B3GALT6
KMT2E
IER5L
EIF2D
SPTLC2
SLC45A4
IMMP1L
ELP4
DOK4
VPS26B
PER2
NCAPD3
LSG1
ERV3-1-ZNF117
ERV3-1
MEIS1
WRAP53
TP53
RFWD3
CALU
ZFYVE21
XRCC3
MAMDC4
LOC101927572
ALKBH6
ISG20
NOC4L
MACO1
DDX51
HYAL2
SFXN5
RPL13A
LRRC56
HRAS
TTF1
CFAP77
PPM1L
TTC16
TRAPPC3
PTRH1
PTMA
MAP7D1
FRYL
H2BC12
H2AC12
TMEM183A
TRIP10
GPR108
WASF2
JUNB
IGSF9B
FBH1
CCDC61
ANKRD16
TACC1
ABHD2
ERI3
MSH2
GGCT
FARSA
CALR
NFIB
HERC2
H3C15
H3C14
H2AC19
H2AC18
CHD9
KDM4B
TPST1
PPP2R1A
CTPS1
SLC25A25
NAIF1
ATP6AP1
TIMM50
RWDD1
RUVBL1
ACTL6A
SEPTIN11
MAPKAPK5
COPS7B
PDE6D
TBCB
POLR2I
OVOL3
ATF7-NPFF
ATF7
MYEOV
SPNS1
SPATA25
NEURL2
LYRM1
DCUN1D3
CTSA
LMTK2
CCDC174
RAB11B
MAMDC2
CBX8
FAM126A
TRIB1
RGMB
TMEM256
NLGN2
RMI1
HNRNPK
PEX3
ADAT2
TSPAN31
AGAP2
C1orf174
HNRNPR
GET3
ASPM
RBM39
DNAJC30
BUD23
USPL1
HMGB1
CCNB2
TDRKH
PGC
MAPK9
MTF2
CDC42BPG
UBN1
GLYR1
LRRC45
CENPX
NPAS4
FDFT1
ATP5F1E
TM9SF4
C16orf72
STAP2
SDF2L1
MPND
H4-16
H2AJ
KPNB1
GLRX5
CYTH2
COMMD2
CHD6
SCAND1
MRPS15
RAB3A
INTS1
NOXO1
GFER
HACD2
ZNF212
AP3M2
ZNF609
LY6G6F-LY6G6D
LY6G6F
ENPP4
CLIC5
ABHD16A
SSBP1
MRM3
GLOD4
SPAG8
HINT2
SSR3
STT3A
DROSHA
C5orf22
TMEM219
PGD
NOP53
SORT1
BBX
GLO1
PGAP2
PLA2G7
PAN2
IL23A
NDUFS3
KBTBD4
TMX2
MED19
GTF2H3
EIF2B1
DIAPH3
ZNF639
MRPL34
DDA1
WASHC2C
ADPGK
ATAD3B
RAB5B
PCOTH
MIPEP
PPP6R1
PDIA6
GATA2
CRBN
CEP131
ARHGEF1
C7orf50
B4GALT7
DNAJB5
RPS20
CENPF
ZNF695
WDR70
PRRG2
NOSIP
EVI5L
TRIAP1
WASHC2A
CREBRF
ZNF830
CCT6B
ZCCHC4
ZNHIT1
PLOD3
TMEM222
HSPA5
FAM204A
RECQL4
LRRC14
CHMP3
GTF3C3
TOR1A
PLEKHM3
STX18
RBBP5
ZSCAN22
ADD1
WHAMM
PCNX3
MAP3K11
FSD2
HEXA
MTERF4
KIAA1841
SIN3A
HYOU1
CCDC77
COA1
COPZ1
STK11
SLC39A13
MVP
RPTOR
MYH10
IMP4
CCDC115
ANAPC5
AKR1E2
ZNF680
TIMM17B
PRICKLE3
PQBP1
POMZP3
MVD
RNF166
CTU2
TRAFD1
SRPK1
ZBTB46
SLC39A4
CPSF1
CREB3L2
NWD1
VPS50
POLR1B
HEPACAM2
ERCC1
C8orf33
TATDN3
NSL1
NUF2
ALG10B
INPP5B
SF3B6
FAM228B
LRRC37A3
FAF1
TPCN1
IQCD
ERCC2
COTL1
PSMD4
CDKN3
SEC13
COG2
ZNF789
E2F6
ZNF107
OPA1
SIRT4
NFATC2IP
BRWD1
WDR31
PDP2
FAM156B
CENPM
ALG10
KANSL2
ALKBH3
CEP63
ANAPC13
RFX2
PTBP1
GPATCH3
ZNF341
FYN
MACC1
TTLL11
BAG2
ABLIM1
WAPL
IDH3B
CKMT1A
NR1H3
ACP2
GPSM3
IARS1
SMC1A
RIBC1
SLC26A2
KANSL3
FER1L5
DNAJC28
ID2
FBXO38
GINS2
NLE1
RHOT2
LRRC75B
GGT1
DICER1
FAR1
CELSR3
TMEM60
PHTF2
RTF2
LINC02210-CRHR1
NADSYN1
DHCR7
COPS4
PPIP5K1
CNNM2
CLCN7
CKMT1B
TMEM39A
STK40
DNAJC11
EEF1AKNMT
OSCP1
SLMAP
PDIA4
BNIP1
NDUFC2-KCTD14
NDUFC2
ARFGAP2
PRRT1
PPT2
MAST4
HGS
ARL16
HINFP
TMED2
MORF4L2
MXD4
MED30
SRRM3
SRPRA
DDX19B
MTRR
FASTKD3
AARS1
ZNF654
RP2
KNSTRN
CGGBP1
ZNF44
PSMD11
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PELATON
RRP15
ZNF143
RAD54L
ELMO2
POLR3B
RPS6KB2
RGS13
LRRC29
FAM98C
PSMF1
PRPF40A
ARL6IP6
AGFG2
ZNF513
NUP107
PALB2
DCTN5
DPH2
ATP6V0B
ZNF296
LCN12
GGNBP2
GEMIN7