ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MAMDC2
WDR74
STX5
MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
SNX16
LOC102724770
DGCR6
KIF5C
ADAMTSL1
SPATC1L
CABCOCO1
TNFRSF19
MTRNR2L8
COL23A1
SP2
FRG2C
FAP
FRG2
EMCN
NAV3
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
CLPB
MUC3A
DPH6
KATNB1
DDX23
EAPP
BOD1
SLC8A1
EVI5L
H4C12
H4C11
H2BC14
H2AC14
VPS50
HEPACAM2
UNK
H3-3B
TMEM242
DNM2
TMEM115
NPRL2
CYB561D2
H4C3
H1-6
CHMP4B
CCDC200
CDCA3
TCEA2
DDX49
COPE
NAA80
IFRD2
HYAL3
RWDD1
SP1
EHF
TBL1X
PHF12
FBXL19
H2BC4
H2AC6
THRAP3
FEM1A
POLR3F
DZANK1
MAPKAPK5
ARHGAP35
AP2S1
PHRF1
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
ARL4D
WDPCP
MDH1
TSN
ARID5B
IRF2BP2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PAFAH2
GALM
IL32
CIC
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
TSNAXIP1
RANBP10
OR4M1
ST3GAL2
PRCC
SLC25A41
KHSRP
RBBP5
PHB
YJU2
SUCLG1
RPS20
MRPL24
HDGF
BANP
NEBL
ID3
ARID2
TEPSIN
NDUFAF8
PEX14
DFFA
CCDC90B
RFX1
FAM168A
SMPD3
TSC2
NTHL1
RAG2
IFTAP
PPRC1
LRRC29
CALR3
C19orf44
NUDCD1
TOM1L2
S1PR4
NCLN
DRC3
TESK2
PAK1IP1
MMACHC
C6orf52
RAB5B
PMEL
CDK2
UBE2T
PPP1R12B
ZFYVE1
UCKL1
GSPT1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
GSDMB
OR4Q3
SPSB3
NUBP2
MRPS34
HNRNPC
EME2
LRCH4
GATB
FBXO24
INVS
ERP44
PRR5L
PES1
COMMD9
SLC25A25
NAIF1
VIPAS39
AHSA1
NDC80
METTL4
ART1
MTOR
NPIPA1
PEMT
TAF12
RPS3
ZNF17
CCDC146
PIGL
NCOR1
COX16
ING4
ZNF417
PANK4
HES5
BMF
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
H2BC15
H2AC15
MALL
SPAAR
HRCT1
PRR14
FBRS
ID1
TMEM11
PIN4
SP5
SRSF11
LRRC40
UNKL
RXFP4
PNKD
OST4
KHK
KHDC4
GPBAR1
EMILIN1
C16orf91
BMP5
AAMP
INTS1
TP53I3
SF3B6
FAM228B
ZNF608
WT1
STIP1
NUP107
BUB1B
ZNF268
OSBP
MED27
GPR137
DOK3
DDX41
GUF1
NOP16
HIGD2A
PARP16
GSK3A
ERF
RARB
GBA
ZNF547
TRAPPC2B
TARS2
TACO1
TTI2
TMEM262
INTS9
HMBOX1
TULP2
NUCB1
DYNC1I2
MTRF1
LARS1
TFPT
TBL1XR1
PRPF31
TMEM70
ELOC
ZFPL1
CNIH4
CDCA5
ZNF513
SNX17
SCAF1
RRAS
RCAN1
NOC4L
EIF2B4
DDX51
SF3A3
LY6L
RPS7
RABL2A
KIAA0895L
EXOC3L1
ELMO3
E2F4
VARS2
RANBP2
GTF2H4
ZNF211
ZNF687
SYMPK
RPL32
PNPLA6
FOXA3
CYCS
NUDT13
MRI1
C19orf53
TM4SF18
TINF2
SLC39A1
NEDD8-MDP1
NEDD8
GMPR2
CRTC2
CREB3L4
ZCCHC4
ZNF165
SNAP25
OR1F12
TSSC4
UBQLN4
RAB25
LAMTOR2
TBP
STAM
SSBP3
PSMB1
PHB2
TMTC3
CEP290
CCNL1
ZSWIM3
KBTBD6
FCF1
COX7C
AREL1
ACOT8
H3C4
TIMM21
STK25
KIF2C
H4C5
H2BC7
H2AC7
FBXO15
EMC4
ABT1
NUP205
METTL3
ATG4C
COMMD1
CCT4
TBL3
RPS2
RNF151
NOXO1
MRPL11
ZNF628
ZNF337
VMO1
PSMB6
NDUFAF5
NAT14
GLTPD2
ESF1
DMAC1
CAND1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
HMX2
BUB3
ZNF225
ZCCHC8
WDR46
SMG8
SEC11C
RGL2
PFDN6
MRPL30
MITD1
NDUFS3
KBTBD4
FAM180B
NUF2
TCERG1
RPS6KB2
RPL36
PTPRCAP
OLFML2A
NR6A1
MICOS13
HSD11B1L
NFKBIL1
MRPL53
MRPL28
MOGS
DDX39B
ATP6V1G2
ARL4C
TMEM107
TRIP10
GPR108
OAZ3
SSBP2
ZC3H12A
SHPK
NDUFB5
MRPL47
CTNS
PROSER3
LIN37
HSPB6
RHOT2
RHBDL1
TOR1AIP2
TOR1AIP1
SPHK2
SMARCAL1
SLC35E2B
RPL18
PSENEN
NFIB
MEIS1
KRT19
KRT15
IGFLR1
GTF3C3
GSTO2
FAM83E
C2orf66
ANAPC5
ZFYVE19
VWA5A
PSMD11
HEMK1
DNAJC17
C3orf18
ZNF585B
ZNF383
ZMYND10
C12orf43
BAZ2A
ATP5MG
ATP5F1B
ZSCAN22
OR4N2
HDAC9
UBAC1
RPL14
SIRT4
AK2
ZMAT2
VRK1
SUFU
HARS2
HARS1
GOSR2
ACTR1A
ZNF140
TRDMT1
TATDN3
NSL1
PPP1R12C
KRT39
CTU1
UFD1
PSMC5
FTSJ3
CDC45
PRRG2
NOSIP
WNK4
VPS25
UBR2
POLDIP3
TMEM94
STT3A
BCL2L1
THAP11
PSPN
ALKBH7
NLK
SEL1L
HMOX1
SMARCD2
CCDC174
SLX4IP
MKKS
ATP6V1G1
PTPRH
PEX3
FARSB
DBP
CA11
AHCYL2
ADAT2
SSR3
ZNF444
UFSP2
SIRT2
NFKBIB
CDK5RAP2
C4orf47
RPL37
CARD6
ZNF286A
KCTD5
MRPS7
MIF4GD
GGA3
VCPIP1
TXNDC2
PTDSS2
C8orf44-SGK3
C1orf159
ANO9
LSG1
CRADD
TIMMDC1
FAM187A
EFTUD2
CCDC103
SEC13
NMT1
DCAKD
BCL3
SUGP1
MAU2
HEXIM2
FASTKD1
TRAPPC3
TMEM60
PHTF2
MAP7D1
HEXA
G3BP1
CLN3
APOBR
CD79A
ARHGEF1
ZNF773
ZNF691
TLE3
KRT23
ZNF548
SPDYE7P
RGS14
POM121
LMAN2
AURKAIP1
CCAR2
C8orf58
SHC1
FLAD1
CKS1B
HEXB
BAHCC1
MT2A
EXD2
CD2BP2
ZNF500
ZC3H10
UBC
TSNAX
RPL41
PDE6D
EMP3
COPS7B
ZNF776
RPIA
NME1
COX7A2L
BABAM1
SMAD3
ZNF48
TBC1D10B
MYLPF
COPS7A
VEZT
FGD6
DLGAP1
SAMD1
RPL18A
MISP3
C19orf67
ZNF420
ZNF143
SART3
LMNB2
ISCU
FBXW11
SUPT7L
SLC4A1AP
TRAF7
RBM25
RAB26
KRR1
ZNF335
SNX15
WFIKKN1
METTL26
MCRIP2
SUPV3L1
ZNF226
SNX1
LTN1
CIAO2A
TXNRD1
PITX3
H4C8
GBF1
CACTIN
SLC35B1
MRPL20
CCNL2
PWWP2A
TMEM63C
EIF3F
SCRIB
NBPF15
EXOC4
RNF121
LOC100133315
DYNC2I2
TARBP1
CTDP1
ZNF688
PEX2
EXOSC6
EIF2AK3
ZNF235
TXNL4B
DHX38
SECISBP2
MRPL21
METTL25
IGHMBP2
CKS2
CCDC59
ZBTB45
SLC27A5
SCYL3
PABPN1
THYN1
ACAD8
SRD5A1
NTMT1
NSUN2
C9orf50
UTP3
RPGRIP1L
FTO
CCDC124
SULT2B1
GRAMD2B
DHX8
EXOSC5
BCKDHA
RGPD2
RGPD1
TXNDC5
MTRNR2L9
FRMPD4
TIPARP
ARHGEF9
MTRNR2L10
EMILIN2
PTPN6
PCM1
ZBTB38
ANKRD28
PDE4DIP
SLC25A20
FNDC3A
SSBP1
PPP5D1
CALM3
PLA2G4A
C5orf38
TOP2A
EPS15
IARS2
BPNT1
CCL3
SYT7
SRCIN1
RPAIN
NUP88
ZAR1
INO80C
HEATR5B
GPATCH11
CSDE1
UVRAG
USP22
HNRNPUL1
BRWD1
ANGPTL2
GLIPR1L1
CAPS2
TRAPPC9
PTEN
KLLN
PLA2G15
INTS10
MATR3
UBE2J1
GTF2I
MYOM2
PMF1-BGLAP
PMF1
ARHGAP17
TJP3
FCRL5
SIX1
PHF19
TBC1D17
PNKP
AKT1S1
ARHGEF2
RAD52
ENPP4
CLIC5
CCDC138
KLHL29
ASAH2
STAT1
TOMM40L
FBH1
DENND1B
APOA2
B4GALT3
KLF2
RMDN2
ATP2C1
KLF6
FUT10
CCDC110
RAB11B
MRPS18C
HELQ
RAP2B
TXNDC11
C1orf198
NGB
GCLC
LNPEP
MDM2
IFNGR2
ATF4
SCT
DRD4
CDHR5
ACTL6A
RUFY3
H4C4
H2BC6
GUCY2D
TRIP4
PCLAF
FAM177B
CXCR5
CCL5
CCDC39
TOM1
TMEM256
PLSCR3
NLGN2
CYTH3
MDM4
SMCO1
ZPBP2
IKZF3
NLRP3
NCOA7
MNT
AIM2
NPR1
ILF2
IL17A
RASAL2
NAT16
HCAR3
CHST12
HDAC7
ANP32C
KMT2C
GLDN
EML2
DPP9
CRYBB1
POLG
FGG
CRYAA
CRYAA2
XAB2
STXBP2
RGS8
PCP2
SKA2
PRR11
KANSL3
FER1L5
TJP1
MAPK11
COG3
NDUFS7
UBE2H
DRAP1
DAGLB
C11orf68
LOC102723996
ICOSLG
COMMD2
USP3
SUPT4H1
SH3RF2
MNX1
ZNF639
CCM2
CBWD5
TUBG1
RETREG3
MRPS23
HSD11B1
ELOVL1
CDYL
CDC20
BDH1
USP30
PSMD4
CBWD6
CBWD3
SLC2A4RG
MED23
LIME1
PAX5
WHAMM
FSD2
TRIM48
FMO4
TP63
BBX
GUCY1A1
FOXK1
FAAP24
CEP89
SERPINB5
LEFTY2
CMSS1
HOOK1
AQR
RAD51AP2
C2orf42
TPST1
RAD51AP1
C16orf72
C12orf4
WBP1L
WAPL
SELENOH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FETUB
CBWD1
INSR
AMPD3
WFIKKN2
SATB1
KDSR
CSNK1G3
CCR2
CRB1
SPTLC3
KIF16B
TIMM22
RAB40B
LRRC14B
PRPF18
TMEM109
SLC33A1
PRPF19
POLD1
NR1H2
CCDC77
STAP2
MPND
DPEP3
DPEP2
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
PIGO
MFAP3L
FAM214B
ERVMER34-1
EPYC
COPZ1
CCL3L3
CCL3L1
ZNF451
TYK2
TNK2
RBM28
ZNF609
TLR5
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
ODF3
MYCBP2
FCGR3A
EPRS1
TXK
DHX16
CLEC7A
TBX19
NPIPB5
GPR84
CHD6
PNISR
HSBP1
GORAB
DENND3
BIN2
ZSWIM1
UNC93B1
SPATA25
RPL35A
PPP6R1
IQCG
HAX1
ECT2
CTSA
CRYBA4
ALDH3B1
SLC9A1
OXCT2
MAPKAPK2
KLHL20
PLCD3
DMAP1
ARNTL
ACBD4
TDRKH
OR8D2
LTA4H
SMARCA4
IFIT1
ACTA1
MGP
TSC1
PSAP
MTFR2
GFI1B
TOMM40
MACIR
CCT8
TUT1
SCAMP4
MYNN
MTA2
F11R
EMX1
CLPTM1L
ADAT3
ACTRT3
ZNF668
ZNF646
SH3GL1
P2RY10
OCSTAMP
DAPK3
CHAF1A
RRP1
NSMCE3
JRK
FAM207A
CSTB
ARID3B
TFB2M
CYP2R1
CNST
CCDC61
LPIN1
KIF22
ITGB1BP1
CPSF3
TRIM7
RPL27A
ZBTB5
SNCA
GPR174
FAM83B
ZNF718
ZNF595