ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
MSH3
DHFR
MAMDC2
DUX4
ARID3B
HEXA
EN2
MTRNR2L8
PNMT
FRG2C
ARL4D
MYLK2
NOTCH2NLC
NOTCH2
PURB
LAMP1
WASHC2A
ZNF285
ENTPD4
TGFB2
WASHC2C
MTRNR2L1
PDGFB
AP5Z1
CCDC200
IFIT1
TMCC3
MEOX1
BRF1
HEYL
BTBD6
ERCC1
TRIL
DERL3
SPATA25
NEURL2
CTSA
ZSWIM1
PDE4DIP
TNC
ZHX2
FRG2
MUC3A
ADAMTS14
CORO7-PAM16
CORO7
TNNC2
SNX21
VASH2
DOCK10
MSS51
CLCN7
ANGPTL4
ARID5B
CELA3B
WBP1L
NOTCH2NLB
NOTCH2NLA
ZNF668
ZNF646
MACC1
PIPOX
BHLHE40
C1QTNF1
COL23A1
RGMB
KLHL41
AFAP1
OR4D6
CRIP2
HMGCS2
XRN1
CSNK2A3
GPSM1
KCNMA1
THEMIS2
LOC102724770
DGCR6
SUMF1
TMEM91
B9D2
ZAR1L
BRCA2
STRA6
BMERB1
BCAR3
RNASEH2C
KAT5
RBFOX2
PPCDC
ARHGAP25
TRMO
TMEM239
C20orf141
RINL
IGLL5
SYNPO
RIPOR2
LCA5
FADD
SLC1A7
STBD1
ZNF229
PTCH1
B3GLCT
DENND2B
AKIP1
ITM2C
PVALEF
AATK
GADD45A
ADGRF1
OR51T1
TLCD4
PRR5L
COMMD9
CLN3
APOBR
TGIF1
SLC35A5
ATG3
ATP6V0D1
AGRP
FHL1
GFRA1
RBPJ
ABCC10
LTBP1
SULF1
CLDN5
PYCR1
MYADML2
FCRLA
NAV2
FRG2B
IFNLR1
RHEBL1
NFIB
BCAT1
SEC22B
SSU72
STUM
SLC27A1
TRIOBP
SLC8A3
CD82
PTPRD
PRL
FREM1
NTRK1
INSRR
SNX16
FOXB2
PALM2AKAP2
GBA
GET4
CDRT4
COL1A1
SPG21
MYPN
EPHA2
ARHGAP28
MYEOV
TNNT1
TNNI3
CYB5R1
ADIPOR1
PROM1
IQSEC1
SMYD1
WDR74
STX5
CLIP1
UXS1
ATRN
FRMPD1
MFSD2A
SACS
SLC19A3
ECT2L
MTUS2
TMEM120B
GPR61
DOK7
FHL2
MYOG
TNNI1
MUSTN1
ITIH4
NAV1
TP53AIP1
EPB41L3
PCBP4
GPR62
FSCN2
HDAC9
NNAT
BLCAP
EXOC7
TBL1X
RMI1
HNRNPK
HAGH
FAHD1
FLCN
B3GALT5
UPP1
ADAM12
PEDS1-UBE2V1
PEDS1
CMTM2
ACSS1
PALLD
LMCD1
ZNF92
ARL14EP
ARHGEF2
SYT8
RHOQ
ATP6V1E2
HMOX1
SCHIP1
ZNF507
TCAF2
TMCC2
ITSN2
PLAGL1
TES
ARHGAP31
PRRC2B
HERPUD2
MYBPC2
WSB2
SLC12A3
E2F2
DHRS3
KRT86
VGLL4
SPAAR
HRCT1
DTNA
TMEM205
RAB3D
CCDC159
LGI2
ATP6V0C
AMDHD2
PROX1
SH2D7
JUP
PDZRN3
PAFAH2
MTRNR2L9
UNKL
NAGPA
ASF1B
TCF4
RDH5
ITGA7
BLOC1S1
SELENOW
HPCAL1
MFSD1
DPYD
CDH7
RRAGC
SBK3
SBK2
RNF150
ARID3A
CHMP1B
BCL3
ASB2
MAP3K7CL
RIOK2
HHIPL2
DAB2IP
C20orf204
TSPAN12
VPS33A
MYOD1
TBC1D2
LIMK1
CELA2A
RFTN1
HNRNPLL
RBM20
KDSR
TBC1D9
SLN
TMEM242
WRNIP1
MYLK4
RPL24
ANKRD1
SMARCD2
RIPOR3
SYN2
SPNS1
CPA5
LAT
SEMA5B
RPS7
P2RY1
TCF7L2
SPON2
NDUFA4
KSR1
PTGIS
CCIN
PRUNE2
HNRNPH2
GLA
BMP7
OR6M1
AKAP11
LRIG1
ITGB3BP
EFCAB7
LURAP1L
RASGRP3
PHRF1
MYCN
BAX
LRRC47
CREB5
MYO18A
TNRC6B
IL32
RYR1
RASGRP4
NUTM2F
NES
C1QTNF2
GIT2
ANKRD13A
TNFSF15
GGA2
AGTR2
ID3
PHC2
UBE2Q1
CHRNB2
TMEM259
CNN2
NEK6
TMEM40
MLH3
SKP2
LMBRD2
PCIF1
ABLIM1
SYNPO2L
MYOZ1
CYP27C1
ENGASE
TBC1D5
SOBP
CELA3A
ACTC1
SHB
APOE
APOC1
RMND1
ARMT1
TMEM167B
KRTAP2-4
HIF3A
CCN2
FAM200B
ALK
HES1
PHLDB2
KANK2
CELA2B
UCHL5
RO60
SVIL
CEP41
SPINT2
EZR
IGDCC4
AMPD3
TP53INP2
INTS10
KLF3
CELF2
SSBP1
KDM3A
FGF16
SLC38A8
FLRT3
ATF3
TRIM16L
FGF6
LBH
STX11
FAM193B
OR14K1
OR14A2
GNAI1
DDX60L
BAIAP2
USP2
MYL5
ATP5ME
DAPK1
TSPAN31
MARCHF9
CDK4
DMD
EYA1
PPP6R1
SLC22A4
SLC44A1
NNMT
OPRD1
RERE
ACOT9
TMEM82
SLC25A34
NUP50
MYL12A
KANSL3
FER1L5
S100A2
DAG1
UBL7
BAHCC1
HRH1
SORCS1
SRP9
MXRA7
WBP2
SH3PXD2A
CRACR2A
IFNAR1
SPATC1L
PTK6
SRP68
SLAMF1
TNNT2
NUTM2G
NAPA
ARMCX5-GPRASP2
ARMCX5
CRYGN
ZBTB18
RAPGEF1
MYCL
SREBF1
VTA1
NMBR
NPEPL1
MCU
CNN3
MAST4
RXRG
ZNFX1
VSTM2L
CRYAA
CRYAA2
ANKK1
MINDY2
NAA38
CHD3
CADM2
MYH7
SPATS2L
CR1L
OCLN
CKMT1B
NTSR1
WNT1
MSGN1
G2E3
SEMA3D
SYNJ2
MAPK10
PKMYT1
PLXNB2
YARS1
S100PBP
PLEC
ACVR1
PRKAG3
LRFN4
INTS12
GSTCD
MYBPHL
ZNF358
MCOLN1
SERINC2
BMP5
CPD
UBE2V1
RGS12
TP53BP1
PRIMPOL
CNBD2
CASP3
LNX1
SYTL2
KCTD14
NPAS4
LRRC17
GSN
JPH2
USPL1
HMGB1
SYNE3
GDNF
CHN1
ZCCHC24
IRF2BPL
SPRY1
SLC38A10
SSUH2
CPA1
STYXL2
GPA33
ASB4
CHST12
SSTR5
ATOH8
CDH13
ZNF335
PUSL1
ACAP3
PLPPR1
TP53I3
SF3B6
FAM228B
LAMB1
RALGDS
TEX46
KDM1A
ARID5A
HS1BP3
NUDCD3
PAG1
COL16A1
IZUMO2
ADCY7
CCNG2
CGGBP1
C3orf38
LSM12
G6PC3
TLN2
SOX8
SPRED2
LMF1
PPP1R3A
RCN1
CNTN6
CARD16
BTG2
TBX2
SLC1A5
PAQR8
NFKBIZ
AMOTL1
AADACL4
SYTL3
MCIDAS
CCNO
SPATA13
EXOC2
MGP
NFIC
FOXN3
FSCN1
ABHD2
NOL4L
KLHL12
CDYL
LIN7C
COG2
SYCP2
FAM217B
IFNAR2
PPP1R3D
SNRPB2
IFT52
PLAU
SLC7A5
TRIP4
PCLAF
TLR9
CARD10
ATP6V1C1
TYMS
PBK
DICER1
MED18
SERP1
EIF2A
DCBLD2
C1QTNF7
ANXA6
BMF
IYD
C1orf226
MLLT6
SOAT2
IGFBP6
ENTPD2
ZNF555
GXYLT2
MAMSTR
UTP3
ERI1
TMEM131
SUPT7L
SLC4A1AP
CBWD5
CBWD3
ODF2L
SEM1
RPA3
RBM43
EAPP
INKA2
HOXC13
CHD2
TDRP
WSCD1
TACR3
LPCAT1
GCK
SLC25A26
TNPO3
CASD1
ZBTB21
EFNA5
ST7
KANSL1
RNF183
MTHFD2L
CT55
ADGRF3
GNA12
IER5
CEP162
EHD1
WRN
PURG
MDM2
RAD9A
PPP1CA
SPRY4
COL4A2-AS2
FAM184B
STK24
MRPL23
MTBP
MRPL13
F7
AMZ1
RPS15A
ARL6IP1
AVEN
TBC1D19
COMMD4
NCAM1
HAAO
RASL11B
CLMN
MAB21L3
VAMP8
VAMP5
FBXW4
TRIM62
LYSMD2
AEBP2
TMOD2
CCNI
ST3GAL5
LTBP2
OBSL1
VWA3B
ASB18
CA11
FLNC
BCAM
COX7A2
ZNF622
PROSER1
NHLRC3
ARHGEF10L
BGN
DZIP3
CIP2A
PEX19
SIX1
NBL1
MOCS3
DPM1
RAP1B
ZNF512
JDP2
C2orf16
C1orf198
RGS19
OPRL1
LKAAEAR1
CAND1
ANKRD12
C10orf67
SSBP2
TMBIM4
SCAF1
RRAS
SYNGR3
NOXO1
GFER
THAP1
RPUSD4
FAM118B
CDC42EP3
VPS11
PTP4A1
TUFT1
ERCC2
SLC4A2
CDK5
PIP4P1
OSGEP
APEX1
ASIC3
PNP
MARCHF8
PSEN2
NFATC2
TANK
SLF2
IGSF10
RRP15
PPIP5K2
TM4SF4
RARA
KLHL30
CDH11
CHMP2B
RBM48
PEX1
ARFGAP1
MAD2L2
DRAXIN
ARID1A
FAM151B
TNNI2
TPP1
TAF10
IFFO1
FRY
PCNX1
HSPB2
EHD2
CRYAB
C11orf52
MB
MIDEAS
KREMEN1
E2F6
MAP1LC3C
PHF23
GABARAP
DVL2
FIP1L1
POLR2E
GPX4
ZNF280A
ZADH2
TSHZ1
ZNF205
ITPK1
UVRAG
ZNF385A
TEX36
PSME1
FITM1
CCDC174
PCBP2
SH3BP4
KIF17
RRN3
PLEKHS1
MATN1
SMAD3
RGS20
ATP6V1H
MNAT1
SPATA9
RHOBTB3
ARID2
CDK5RAP2
MTF2
AZIN1
TBC1D13
NLRP6
MAP3K7
AGAP2
MUSK
WNT10A
NR2E3
GRN
UQCRHL
UBB
NUP42
DARS1
CEP68
GAS1
PSMA5
STAT1
STARD3NL
PIH1D2
NKAPD1
TRMT10B
BIN1
PPP3CA
SH2B1
THAP10
LRRC49
CCDC9B
ERFE
LRRC58
WBP11
MME
C12orf60
SEPTIN9
ABCC3
ZNF32
AFF1
LIX1L
SF3A3
CASQ2
CTR9
TRMT5
SLC38A6
FANCC
RPL22L1
ZNF593
MRAP
FAM110D
C1orf232
SPTAN1
RAPGEF4
GTF2B
NFIA
EGFR
SIRT2
NFKBIB
WDR11
CACYBP
THUMPD3
SIGLEC11
GPR146
LFNG
VAMP2
PER1
PEX3
ADAT2
NAGLU
DENND2A
INPP4B
RGS3
POLR2M
SH2D3C
SLC12A7
CDK9
NBPF26
NBPF19
NBPF14
DNASE1
MAP2K3
TUBA1B
RTKN
C22orf31
ATP6V1G1
N4BP2L2
PALD1
GPR153
GGTA1
LOXL1
MSL2
RRAD
CIAO2B
CES2
CDH16
CCDC146
TTC30A
PPP4R3B
SETD5
TMEM61
DAPK3
EXOSC8
ALG5
SLC2A10
CD44
KCNF1
INMT
PSAP
MTMR9
PLAAT5
MBNL2
DNTTIP2
LOC100421372
HSPA14
DBF4B
CDNF
LOC388282
FLYWCH2
WASHC5
NSMCE2
KRTAP5-3
KRTAP5-2
ANXA2
NPPC
TUBG1
RETREG3
CHRNG
AP5S1
RBMS3
PNPT1
ABCA4
MEF2D
EVPL
HNRNPD
LOC112694756
ALDOA
IL26
PLEKHD1
PGF
ARMC8
RIMS4
EFHC1
MPRIP
CCDC15
MPP7
TBC1D30
GNS
JMJD1C
MRPL44
ESPNL
VGLL3
EPS8
TSR3
GNPTG
MYOF
CEP55
PPM1D
ZNF143
SLC22A8
FAM120B
DLL1
POMZP3
ST3GAL4
NUP205
RBBP5
ZNF519
SLC35E2A
ICA1L
PPL
VPS50
HEPACAM2
ANKRD40
PFDN4
COX16
GBX2
NKAP
SELENOT
KIF16B
THADA
LSMEM1
PRDM12
SPACA6
SGIP1
STK36
RNF25
CEP63
ANAPC13
STXBP5
DCLRE1B
AP4B1
MRPS18A
HUNK
MTMR14
TPM2
MYL12B
HOXA4
HOXA3
HOXA5
TMEM39B
DAAM1
TGFBRAP1
C2orf49
TBC1D2B