ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089506 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◣ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

MAMDC2
BCAS3
NPAS4
HEATR6
PARD6B
TUBD1
RPS6KB1
PSMD6
BRIP1
ARFGEF2
ZNF217
IQGAP3
PFDN4
METTL1
EEF1AKMT3
CYP27B1
TSR3
GNPTG
BCAS4
USP32
MOK
UNG
ALKBH2
DYNLRB2
HIPK1
SUMF1
SNX16
XKR7
TRIM37
FBXO32
APPBP2
SLC12A9
FBXO5
FAM72C
FAM72A
MCM7
AP4M1
TEX14
RAD51C
PPM1D
CCDC200
SKA3
MRPL57
NCOA3
NAGPA
SMYD5
COL23A1
C3orf14
PHTF1
FRG2C
VPS50
HEPACAM2
CSTF1
AURKA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SFSWAP
DHX40
C8orf33
C12orf66
SAP30BP
RECQL5
DUX4
SCRT1
BARHL1
EPN1
CREBRF
CCT2
CRBN
UTP20
RAD54B
NOTCH2
MUC3A
TRIM33
YPEL2
CNOT3
HSDL1
DNAAF1
WDR4
RMDN1
CPNE3
HSF1
BOP1
TCTN2
FANCI
RUVBL1
HCFC2
GLT8D2
PGBD5
ATG14
NBPF15
HTR5A
NCAPH
SPATA25
CTSA
NEURL2
IQSEC3
MCM10
SLC37A1
RSPH1
RAE1
NUP214
TROAP
SGO1
ATXN7
THOC7
CPLX2
RNF166
CTU2
CEP128
RRP15
ZNF331
CCNB1
PPM1E
RAB22A
TOMM70
LNP1
ZFYVE1
CLTC
TRMT61A
DDX42
CCDC47
TTK
FAM214A
PUF60
ZFYVE26
RAD51B
NGDN
SMG8
ATXN1L
TTF2
NCKAP5L
ATG101
DYRK1B
SLC45A3
CCNA2
BIRC5
TADA2B
CCDC96
MED20
BYSL
YIF1A
TMEM151A
POLR2J3
TRIP13
BRD9
GRWD1
CCNG2
DYNC2I1
VARS1
KLHDC4
SPPL2A
RNF40
CCDC189
INCENP
MAX
DCLRE1B
AP4B1
CYB561D1
FBXL3
XRCC2
KAT2B
INSM2
C16orf46
FAM72B
TRIM48
DDX11
SKA2
PRR11
VRK1
NUDT1
MRM2
FAM91A1
FRG2
USP10
LOC101928764
NAA25
STOML1
PML
ANGEL1
SPTLC1
TUBB3
UBE3B
KCTD10
TTLL11
GMCL1
NUP107
AEN
SART1
C16orf71
ANKS3
LRRC29
MFSD1
CENPBD1
MRPL52
NEMP1
EIF1AD
BANF1
ECT2
EBAG9
TMOD3
SLC35A1
NOL8
CENPP
L1CAM
RNFT1
SAXO2
EFL1
ZEB1
TTC27
UBE2C
TASOR2
CBLL1
NDUFAF6
CCNE2
VGF
WASHC5
NSMCE2
METTL3
GFOD2
SPAG1
PPM1B
ANKRD46
LYSMD2
TMOD2
SKIV2L
NELFE
DNAJA3
TDRKH
HMGCS1
MAPK8IP2
TACO1
CHUK
TRIM4
RABL2A
RPP40
HAUS7
SIKE1
CCDC146
RRP1
AUH
DDX49
COPE
MOCS3
DPM1
ARFGAP1
TOPBP1
TF
EDC4
PTGFRN
ACOX3
TRMT61B
ATAD2
TMEM150A
FIS1
PRKAR1A
SLC25A40
DBF4
DHX37
BRI3BP
TTLL9
NUB1
SYVN1
FANCD2
DLGAP5
RHEBL1
MKI67
INTS1
EXO1
RTBDN
NET1
TOMM22
MEA1
PSME2
TPTE
RNF31
TAF5
SF3B3
COG4
ANKRD52
SLC15A4
KIFC1
RACGAP1
POLR2J
AP4E1
PPP1R12B
CYP51A1
NKX1-1
UTP23
HAGH
FAHD1
EIF3H
ATG7
MCCC1
AMZ2
PDE4DIP
NDUFS3
KBTBD4
SUPT7L
SLC4A1AP
STX16
ASNS
C20orf27
GSKIP
ATG2B
TBC1D13
STRN3
AP4S1
DSCC1
PPP1R16A
FOXH1
ZHX3
DDX19A
TBX2
SLC35B1
OSGIN2
GUSB
KIF14
ASPM
ZFAND2A
INPP5K
PSMC1
LMAN2
VANGL1
ADAR
LCMT1
HOMEZ
EIF2D
SGO2
TWNK
MRPL43
TCP11L2
SLC25A26
ANAPC7
DUS4L-BCAP29
DUS4L
COG5
KLHL24
NOL6
ATP6V1C1
EIF3C
EIF3CL
THOC3
ZC3HC1
ALAD
SLC25A24
VIRMA
RABL2B
GTF2H3
EIF2B1
ZC3H3
SNRPC
SPG7
ATP5MPL
CDCA4
EEF1E1
BICDL1
RPGR
U2SURP
TRAPPC10
SRPK2
EFCAB6
BMP7
RFC3
TCF19
CCHCR1
MED13
NDE1
MARF1
NTNG1
TSFM
DDX21
METTL2A
PEPD
ZC3H18
PMF1-BGLAP
PMF1
DNAJC21
CSDE1
GNA13
LEKR1
IPO4
ARMC2
CKAP5
GOLGA5
GDPGP1
CIB1
C8orf76
H3-3B
PSEN1
AFTPH
EXOC3L1
ZHX1-C8orf76
ZHX1
RHBDD2
AZIN1
E2F4
NANS
ESPL1
IARS1
SSBP2
ATP5MG
RFC2
H1-10
COX19
TERF2IP
KARS1
CNIH4
MIS18A
KLF1
GCDH
TBC1D30
GNS
PDSS1
PDXDC1
URM1
ZNF529
ARPP19
MYL5
ATP5ME
FRAT2
GLRX5
TBC1D23
DZIP3
CIP2A
POLQ
KIF18B
NME1
SPC25
PRPF18
MRPL11
TIGD5
EEF1D
SLC39A4
CPSF1
METTL25
CCDC59
FBXO33
DOHH
NUDT3
KPNA2
CENPN
MDM1
RTF2
GTPBP4
C1orf54
APH1A
MXD1
GFPT1
TMEM18
HEATR5B
GPATCH11
ROPN1L
GLE1
SQLE
IDH3A
MBTPS1
CCDC15
RSL24D1
XPOT
SH3BP5
SMARCA5
DUSP11
C2orf78
B3GNT2
FAM185A
SUPT4H1
TRPM7
MFSD14B
SPATA2L
LLGL2
NDUFV1
OXNAD1
DPH3
VCPKMT
YWHAG
INTS8
DNAL1
GNPNAT1
ITGB1
COPZ1
MAD1L1
GATAD1
MTRNR2L2
MSH3
DHFR
CCDC86
AGFG2
CDK1
CCT5
ATPSCKMT
HELZ
RFWD3
PRIM2
GPSM2
COX5A
SUB1
NDUFS6
MRPL36
BFSP1
DSTN
GPATCH4
USP30
ZBTB9
KLF10
KCNH6
PCNX3
MAP3K11
PIAS3
RMC1
TRIM45
CDK9
PCLO
EDC3
MRPS23
SEL1L
PSMC2
DNAJC2
GPR146
TBK1
ATP5MF-PTCD1
ATP5MF
ZNF706
DNAAF2
UBR5
TMEM60
PHTF2
RRP12
SHCBP1
TSEN2
C6orf89
PPIL1
SPATA33
DERL1
FAAP24
CEP89
TUBA1A
ACTR3
ARHGEF5
OAZ3
NHP2
TIMELESS
AARS2
SSR3
LOC100289561
SELENOS
E2F5
RAB1A
METAP1D
SMIM5
CDC14B
ENDOV
DYNC1I2
GABARAPL2
HJURP
ARL13B
HAUS5
CNIH1
CMTM6
ZFPL1
CDCA5
RRM2
TMEM262
FAM227B
DTWD1
LRFN4
ZFAND3
PDF
MAD2L1
IPO11
DUS2
DDX28
LTO1
TEX10
DENND2C
PDAP1
BUD31
VIPAS39
AHSA1
CTDSP2
NOC4L
DDX51
PTRHD1
CENPO
BBS1
PRMT6
IFT22
NAA20
NAMPT
URB1
OS9
PTPN1
WDR77
ATP5PB
MPHOSPH6
PLEKHM1
SWI5
GOLGA2
TM9SF1
FERMT2
EIF1AX
ZSCAN2
HSPA9
ECSIT
TBC1D15
DEPDC1B
PSMB7
ZNF79
LYRM4
FARS2
IDI1
WDR37
ZNF383
TECPR1
PYCR2
ZNF281
DIP2C
MTFR2
INKA2
DDX20
RXYLT1
FANK1
HPS3
KMT5A
SETDB1
PMEL
CDK2
CORO1C
ZDHHC17
NOC2L
KLHL17
QTRT1
MND1
POLR3F
DZANK1
RNF114
VPS13B
PITX3
GBF1
RPTOR
METTL17
PSMD4
CDK5RAP2
MRPL38
TMED8
SAMD15
CAMKK2
ACYP1
STK38
TICRR
ZAR1L
BRCA2
MMS22L
SCRIB
LIN52
ALDH6A1
RPL30
RNF19A
EHBP1
GMFB
RNF44
FAM72D
PLK1
PRELID3B
OXR1
WDR35
UTP18
MBTD1
EEF2K
RFX1
MKS1
PWP2
LOC102724159
DNAJC25-GNG10
DNAJC25
NPM1
CFDP1
TADA3
ARPC4-TTLL3
ARPC4
TP53INP1
SPOP
POLR3B
ASCC3
COPS3
ZSWIM3
ACOT8
TMED10
RNF181
SNF8
ACBD3
PLCL1
RBM25
TSKS
AP2A1
NFAT5
TOGARAM1
KLHL28
SUMO3
TRIM59
RHPN1
MATN3
NEIL3
REXO4
ADAMTS13
RNMT
FAM210A
CYB561
SLC35A2
LINS1
ASB7
FAM162A
CCDC58
PREX1
RNF139
MTG1
AGK
RETREG1
NUF2
BLM
UBXN11
SH3BGR
LCA5L
TMEM249
SLC52A2
FBXL6
HSPA5
USP14
CGGBP1
SKP2
LMBRD2
COMMD1
CALCOCO2
WIPI2
ZNF654
TXLNG
COQ5
RANBP9
FBXL13
ARMC10
XPC
LSM3
NOB1
TM2D3
MDM2
STX4
UQCRC2
BDH1
NRBP1
MUC1
TRMT1
NACC1
SPNS1
GATB
NRAS
TMEM129
TACC3
ATP1A1
LRRC37A3
SLC31A1
FKBP15
SUSD6
TARS3
MAEA
UBXN7
RAD51
TRUB2
COQ4
RAB5B
FANCC
ZNF212
MRPL22
GEMIN5
USP8
S100A13
CHTOP
ZBTB11
NARF
GUK1
KAT8
SCFD2
GAR1
TMED5
CCDC18
POLR2J2
ARSG
SCRN3
CIR1
SLC16A6
TEX2
SLC30A5
KBTBD8
SMC3
ADIPOR1
YY1AP1
DAP3
ZNF888
CUL2
TRIM56
LIX1L
AP5Z1
PYCR3
CS
ZNF473
VRK3
ZNF3
DISP1
HIP1
CKAP2L
SRPRB
TMEM258
FEN1
LSM14B
CHFR
CSRNP2
ELAC2
C14orf28
DLD
EDRF1
MAP2K2
LOC102723996
ICOSLG
AURKB
FBXW8
SLC25A19
VPS11
FKBP3
FANCM
XPO5
POLH
ABCF2-H2BE1
ABCF2
STRIP1
TMEM183A
NAA35
SDE2
SEC61B
PPM1H
CALB1
CEP164
PHETA1
NEK2
KNOP1
RECQL4
LRRC14
RFC1
MTPN
LUZP6
MFSD4B
RPL32
GFUS
CNBP
IMPA1
CBLB
SNX11
SNX4
POC1B-GALNT4
POC1B
GALNT4
UPF2
GK5
DNAAF3
NEU3
PXT1
KCTD20
HELZ2
LGALSL
VAC14
PCOTH
MIPEP
NARS2
CKS2
CFAP298-TCP10L
CFAP298
UBE2V1
ANKRD28
FSD1L
TMEM250
YWHAQ
SLC27A3
UNC119B
UBE3D
DOP1A
MTMR14
EIF2S1
ATP6V1D
CNPY3
STYXL1
MDH2
CRELD1
WDR81
SSNA1
ANAPC2
THBS3
MTX1
SPTLC2
MYBBP1A
GPANK1
C7orf50
C2CD2L
SENP5
CSNK2B
CELF6
PSMD2
LY6G5B
MTCH1
JMJD1C
DPAGT1
STRN
PAWR
RAD18
TONSL
PUS1
IREB2
GSN
RMI2
RAB14
GAL3ST3
SF3B2
ARL8B
ING4
NBN
MAT2A
UBR7
GON7
PRDX6
GPATCH2L
EDEM3
HELLS
RC3H2
LDLR
KIF5A
DCTN2
SLX1B
SLX1A
BOLA2B
BOLA2
PIGU
WIPI1
LARP4
FAM186A
WDR43
COX14
LRRC47
FRAT1
GOLGA3
SLC35A5
ATG3
MAP4K1
EIF3K
MTIF2
TRAFD1
L3HYPDH
JKAMP
SRRT
PRPF38B
SETD1A
DMWD
ZNF263
TRIB1
YWHAZ
RPS6KL1
LTV1
QSOX2
POLR2K
FBXO43
COMMD4
AP3B2
PDZD11
KIF4A
UBE2G2
SPG21
ENTPD5
BBOF1
TTC13
ARV1
PMPCB
COA8
BAG5
TMEM127
CIAO1
RAB7A
TMED9
MSH6
GTSE1
C12orf45
RPIA
RTKN2
NKIRAS1
EIF3E
PIP4P2
DNAJC30
BUD23
NEK4
PHLPP2
TSPAN10
NPLOC4
FLCN
DENR