ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089499 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◣ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

HEATR6
NPAS4
MAMDC2
PSMD6
BCAS3
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
PFDN4
IQGAP3
HTR5A
TRIM37
SKA3
MRPL57
PARD6B
USP32
APPBP2
ATXN7
SLC12A9
SCRT1
PPM1D
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DYNLRB2
ARFGEF2
UNG
ALKBH2
IQSEC3
ZNF217
FANCI
NCOA3
KPNA2
DCLRE1B
AP4B1
BCAS4
FAM72C
FAM72A
BMP7
BARHL1
CPLX2
SAP30BP
RECQL5
TRIP13
BRD9
NKX1-1
C8orf33
HSDL1
DNAAF1
METTL1
EEF1AKMT3
CYP27B1
VRK1
FAM72D
RAD54B
TTLL11
MYBL2
HIPK1
SMG8
TRIM33
MCM10
C12orf66
KIF14
TSR3
GNPTG
C3orf14
SPATA25
CTSA
NEURL2
XRCC2
DHX40
POLQ
NOL8
CENPP
TRMT61A
AP3B2
MUC3A
NUDT1
MRM2
FANCD2
HSF1
BOP1
CSTF1
AURKA
XKR7
SIKE1
RNF166
CTU2
RFC3
BUB1
MTFR2
DUS2
DDX28
DZIP3
CIP2A
RRP15
PGBD5
SGO1
MOK
NAGPA
RRM2
WDR4
FAM72B
NCAPH
PHTF1
LIX1L
TROAP
RNFT1
L1CAM
KLF10
EIF3C
EIF3CL
TONSL
KPNA1
KAT2B
MOCS3
DPM1
NOTCH2
KCNH6
WASHC5
NSMCE2
FAM214A
CCNA2
CRBN
CCDC200
EXO1
SARS1
EXOC6
CDIPT
GTF2H3
EIF2B1
ZFYVE1
TBX2
MED20
BYSL
DSCC1
LOC101928764
ZHX3
TMED10
CCT2
THOC7
POLR2J3
TRPM7
FBXO5
EDC3
PDE4DIP
SKA2
PRR11
TSEN2
FANK1
ATP6V1C1
RAB22A
PPP1R16A
FOXH1
METTL2A
CHUK
VARS1
EIF2D
DNAJA3
AP4E1
ZNF517
INKA2
DDX20
TTK
TBC1D30
YPEL2
GNS
TOP1MT
TCTN1
DYNC2I1
MRPS23
CCT5
ATPSCKMT
RTKN2
SNX16
ADAT1
HSPA5
CNOT3
TMEM249
SLC52A2
FBXL6
BIRC5
NEIL3
TTF2
SUMF1
FBXO32
ATG101
CEP128
RMDN1
CPNE3
SGO2
UBE2C
SFSWAP
SQLE
USP14
AZIN1
ZSCAN2
NUDT4B
NUDT4
ZNF696
COQ2
ESPL1
EEF1E1
SRPRB
RRP12
RABL2B
IARS1
RCN2
INSM2
NDUFS3
KBTBD4
CNTRL
C5
ATAD2
GABARAPL2
U2SURP
SPAG1
WASHC2C
TCF19
CCHCR1
GABPB1
MCM7
AP4M1
RAE1
CREBRF
MYL12B
CLTC
MTMR14
ERN1
PPT1
TSFM
ARMC2
C1orf54
APH1A
STK36
RNF25
CKAP2L
OAZ3
DYRK1B
UTP23
UBE3D
DOP1A
PYCR3
NEK11
ASTE1
ACOX3
CENPN
TRMT44
NDUFAF6
CCNE2
NAA25
POLR2J
ASNS
GTF3C5
TPTE
UTP20
NBPF1
QSOX2
CYB561D1
NUB1
SNAP25
ATXN1L
VANGL1
STX16
PPP1R12B
CCNB1
WASHC2A
CDC14B
TICRR
TTC27
MAPK8IP2
RXYLT1
MRPL44
VAC14
WDR43
PRELID3B
WDR31
ZFPL1
CDCA5
TMEM262
PLK4
TRIP4
SPTLC1
STOML1
PML
PPM1E
PRKAR1A
NME1
NET1
MED13
NUF2
RTBDN
UMPS
IKBIP
APAF1
RPS19
RAD51
RABL2A
BICDL1
NAT10
MYO5C
IPO4
REXO4
ADAMTS13
ZNF79
ZNF331
PDXDC1
DHODH
PRCP
DDIAS
VPS33A
PWP2
LOC102724159
TACO1
ROPN1L
NDUFB3
FAM126B
GALK1
STMN3
RTEL1
KLHL24
WDR35
BCAS1
SLCO4A1
SPATA2
INIP
GET3
CENPBD1
RFX5
MTRNR2L2
MSH3
DHFR
BLM
NEMP1
C16orf71
ANKS3
AGFG2
DEPDC1B
TP53INP1
ATG14
SLC37A1
RSPH1
PSMB7
ATP5F1E
MXD1
PSMD12
DHX37
BRI3BP
DUX4
NUP107
FANCC
PREX1
PUS1
CDK5RAP3
BCAS2
YIPF4
ATP1A1
DECR1
KIFC1
CFDP1
INTS2
RACGAP1
AEN
TRIAP1
LTO1
CCDC77
KDM5A
CPLX1
ESCO2
CCDC25
TOP1
RECQL4
LRRC14
DDX42
CCDC47
MDM1
RINT1
ARRDC4
SLC25A24
PIGU
CEP55
TBC1D15
CHRNA5
VPS50
HEPACAM2
TRIM48
CENPH
RNF115
POLR3C
TFRC
TUFT1
ZEB1
ZDHHC17
TMEM150A
DLGAP5
LTV1
KLHDC4
NHP2
C12orf45
GPR89B
MEA1
TBK1
XPO4
JMJD1C
RRP36
RBM48
PEX1
MKI67
TMEM120B
NBPF15
CNPY3
ZNF367
CDC20
COL23A1
SLC35B1
TMOD3
GLRX5
PDPR
DDX11
AOPEP
RRP1B
HSF2BP
EIF3E
MED6
NOL6
SUPV3L1
DNAH7
POLR2J2
C20orf27
STRADA
PSMD4
ABL2
MND1
LMAN2
PKMYT1
SLC13A3
TP53RK
RNF114
LRPPRC
ABCF2-H2BE1
ABCF2
DPY30
EXOC3L1
FRAT1
POLL
DPCD
E2F4
NUP54
TCP11L1
ARHGEF5
MARCHF10
GRWD1
SMC2
SHOX2
RSRC1
ANKRD46
MXD4
CCNE1
ASL
ATR
DDX21
ZSCAN25
ZNHIT1
PLOD3
ZNF706
WWP1
RAD18
RNF40
CCDC189
TSEN54
CASKIN2
SLC25A19
DUS4L-BCAP29
DUS4L
COG5
VCPKMT
CCDC88A
KIF20A
BRD8
MFSD1
NPM1
ZGRF1
LARP7
DDX46
RPS29
TBC1D13
LRR1
RMND5B
WDR46
PFDN6
METTL6
EAF1
MDM4
FANCE
NAA35
TRIM25
CMTR1
TRAPPC10
LDLRAD3
NDUFV1
WFDC3
DNTTIP1
GFPT1
ATG7
VPS13B
ZNF622
MMP24
MAP3K20
POC5
LRRC29
DIMT1
RNASEH2A
PRDX2
INCENP
THAP5
DNAJB9
RPL6
PTPN11
MON2
NOP9
DHRS1
SUSD6
HMGB1
PCOTH
MIPEP
ECT2
PIP4P2
TEX10
PRDX6
GSTO2
SF3B3
COG4
FRG2C
TMEM199
POLDIP2
RBBP5
HEATR5A
SLC35A5
ATG3
CLPTM1L
CSRNP2
KIAA1586
BIRC6
RPL36AL
MGAT2
SHCBP1
RPP40
PMS2
AIMP2
FAM24A
PRPF18
SEL1L
DLST
CAV2
FAM171B
CCDC86
PLK1
C6orf89
TMEM39A
GPR107
URB1
PPAN-P2RY11
PPAN
ANGPTL6
CEP135
FBXW8
MRPL3
HEATR5B
GPATCH11
CENPA
PTRHD1
CENPO
ZFAND2A
NDUFAB1
PRPF19
UTP4
DERPC
CHTF8
ASCC3
THBS3
MTX1
P2RY11
BSN
RBM19
ZNF688
SMIM5
TEDC2
PDCD11
ATP5MD
NOMO2
COPS3
AJUBA
COMMD4
SPPL2A
ZHX1-C8orf76
ZHX1
NME2
NOB1
SPICE1
SLC7A6OS
PRMT7
PDCD6
IST1
GLE1
IFT88
ZC3H3
MELK
STRIP1
TBL3
SLC25A44
PLCG1
ANKRD40
KAT8
COG7
BBS5
MYBL1
WDR3
GDAP2
SLC39A4
CPSF1
TADA3
ARPC4-TTLL3
ARPC4
UBE3B
KCTD10
ZMYND8
FSD1L
WDR74
GTSE1
NGDN
NCBP2AS2
NCBP2
MLYCD
FIGNL1
PAM16
AUH
EEF2KMT
CCNG2
RUVBL1
ZNF778
GPR89A
DDX19A
NAGK
CKS2
UBE2G2
ANGEL1
PRMT6
LSM8
ZNF23
MRPL2
KLC4
BCL7B
C16orf46
KDM5B
TMEM67
ZC3H18
OTULIN
CTNNAL1
PPRC1
CCDC150
PLEKHM3
PFDN5
MYG1
CLBA1
MIGA2
STMN1
B4GALT7
DSE
PSMC6
CD2BP2
RASAL2
TSPYL4
YIF1A
TMEM151A
EIF2S1
ATP6V1D
TTLL4
CDT1
GOLIM4
KIF21A
RRP1
FAM174A
PCNX3
MAP3K11
WDR53
FBXO45
RRM2B
USP15
FBXW2
LRWD1
ALKBH4
TEFM
MRNIP
SENP5
H3-3B
AMMECR1L
NSG2
FZD6
UFD1
CDC45
DPY19L4
SAXO2
EFL1
GFOD2
NXF1
ALAD
ZNF3
SLC27A2
TATDN2
DAP
ZNF473
VRK3
COMMD2
CFAP54
FAHD2A
MESD
NDUFS6
MRPL36
TADA2B
CCDC96
ZC3HC1
TOMM22
NOMO3
LRRC47
METTL25
CCDC59
KIAA2026
PSME2
SURF2
SURF1
RNF31
RPL14
CACYBP
CDK1
NTAQ1
SH3BGR
LCA5L
MAX
CDC25B
ADPGK
MCCC1
TM2D3
PEBP1
SPC25
CENPW
EIF1AD
BANF1
MFSD5
DENND2C
TMEM167B
PI4KB
C7orf57
PCMTD1
TASOR2
TTLL5
ERG28
NOL11
TAF4B
RPSA
NOC3L
FAM117B
CALU
TCTEX1D2
NIPSNAP3A
PGD
CEP350
TUT7
SLC29A2
CPEB4
RHNO1
FOXM1
DGKZ
XPC
LSM3
RHEB
ZNF410
RBM28
NRAS
DNAJC25-GNG10
DNAJC25
RIDA
POP1
NDUFB2
TRMT5
SLC38A6
ZNF680
CYB5B
LMNA
TECPR1
ZBTB26
CDK9
STXBP3
ZNF492
MEX3A
KIF18B
FAM227B
DTWD1
FKBP3
FANCM
STYXL1
MDH2
TASP1
E2F8
WDR20
HSP90AA1
UQCRC2
BCKDHB
MIS18A
NUDT2
KIF24
PTPN1
TIGD5
EEF1D
GDAP1
CSDE1
SPATA33
ZNF383
SLC25A36
CAMSAP2
BZW1
HDAC2
DNA2
NOM1
TMEM258
FEN1
PITX3
GBF1
ELP1
ABITRAM
CDC42SE1
MLLT11
VKORC1L1
ZNF641
CDC42BPG
THOC3
LSS
ADCK1
HJURP
DERL1
TMEM183A
ETFDH
C4orf46
IQSEC1
SUCLG1
ZNF148
SLC39A9
ERH
CALB1
NTNG1
HCFC2
GLT8D2
RHEBL1
RAD51AP1
C12orf4
POLR3F
DZANK1
SYS1
CIT
DHX16
FAM161B
COQ6
PIAS3
NUP160
KMT5A
USP10
SGTB
NLN
DNAJC21
PDPK1
SLX1B
SLX1A
BOLA2B
BOLA2
SPNS1
SNRPE
RNASEH1
SRD5A1
NSUN2
PFDN2
NIT1
GPATCH1
STK3
GKAP1
DYNC1H1
KIF11
PPIL1
GPN1
CCDC121
SLC25A16
RHBDD2
CHRNB2
POGLUT1
TAF1C
ADAD2
WDR25
WARS1
CLCN7
DYNLL2
RELB
FANCG
GLRX2
ADAMTSL4
APRT
MRPL28
CDC25A
SKIV2L
NELFE
PCNA
NCKAP5L
UNKL
C14orf28
ZFAND3
PITPNC1
ITGB4
BAZ1B
USP45
PRTG
CENPE
EBAG9
SSNA1
ANAPC2
NSUN5
GAL3ST3
SF3B2
ATP5MF-PTCD1
ATP5MF
LEO1
RNF19A
ERCC3
SPATA17
GPATCH2
KLHL18
KIF9
HAGH
FAHD1
TRMT61B
HSP90AB1
FBXO33
POLG2
PDIA5
UBR5
ACBD3
UBQLN1
TENT2
RAD9A
PDSS1
SMC4
IFT80
NGRN
RCE1
SWI5
GOLGA2
SLC39A11
STIP1
RBM45
PDE11A
DLD
EHBP1
RPN2
MROH8
PIEZO1
LACC1
CCDC122
BUB1B
POLR1B
ZBTB9
NOL7
DARS2
CENPL
MTPN
LUZP6
HELZ
ZNF726
RTN4IP1
QRSL1
RWDD1
C2CD2L
USP8
DDX23
LIME1
RNF139
NDUFC2-KCTD14
NDUFC2
SLC2A4RG
FAM122A
FDX2
TMEM231
IDH3A
MCM3
RPL32
PMPCB
NUP155
C6orf136
NFATC2
LRFN4
ABCA5
MVK
EEF2K