ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3450327 | JMSU1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◣ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

LPCAT3
TNPO3
TAGLN2
COTL1
SREBF1
CRY1
PDE12
MTRNR2L2
DHRS3
RXRA
S100A2
WDR74
LY6K
VGLL4
SLC25A20
SIRT5
DLG4
ACADVL
RRN3
CDK11B
CDK11A
MTRNR2L8
GCN1
ETFDH
C4orf46
FASN
NDUFS7
SULT1C2
UPF2
TFAP2A
MMP19
UROS
BCCIP
AKR1C2
SYDE2
ANAPC15
ACSL3
AXL
NOL7
GBA
COQ5
ROCK2
NR2C2
SDCBP2
HSDL2
CLCF1
PLEC
ACACA
RNF207
ACAA2
KMT2A
CAT
SH3BP4
BRF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TBP
PSMB1
KRT8
ATXN2
ABHD6
ECH1
USP49
SPRED2
STT3B
PDCD1LG2
KCNMA1
MYL12B
SCARB1
RGPD2
RGPD1
NFKBIA
TRAPPC3
NEURL2
CTSA
ESRRA
AURKAIP1
C16orf95
GPR39
E2F3
AJUBA
OTUD7B
LMNA
GRHL3
MTRNR2L9
MAP3K7CL
SRCAP
LOC730183
PTX3
MLYCD
NKIRAS1
HIVEP1
ACADS
FLOT1
SMG5
SLC50A1
KRT80
TMEM53
ARMH1
GPRC5A
PPP1R12B
PTPN4
ADAMTS12
H3C15
H3C14
RARB
PLEKHG4
HSD17B4
ITGB2
SCOC
SLC45A4
PLD1
PPP1R15B
ZNF746
ETFA
REXO4
CCNL1
TCTEX1D4
BTBD19
HERC5
MMD
AK3
GFI1B
TSC1
AMOTL2
DBI
C2orf76
PCCA
RGPD8
RGPD5
GABPB2
WDFY2
GMPPA
RNFT1
ENO3
CARHSP1
STK11
PHYH
PSAP
GSDMD
TSPAN4
PDE4DIP
TBL1XR1
S100A3
SLC25A1
SMAD3
SKIV2L
NELFE
LAMP1
AKIRIN1
ZBTB37
TMEM230
CENPH
CFLAR
ERCC1
MAIP1
FAM98B
EIF4E
STK17B
PPP1CC
MICOS10-NBL1
MICOS10
OSMR
OARD1
NFYA
BRCA1
PEX19
TINAGL1
ASXL1
TCF3
RIPK1
NUDT4B
NUDT4
SYNPO
ZADH2
ISCA1
GPR137
GABPA
ATP5PF
PRELID3A
SCAF1
TRIP12
FBXO36
MAD1L1
DENND4B
IBTK
MDM2
UPRT
ABCB7
IFRD1
SLC9A8
CPA4
NUP153
IGFN1
BMS1
WDR7
EIF2AK1
LIMA1
TMEM139
NEBL
TNFAIP8
SF3A3
ABHD15
TP53I13
ETFB
ARL14EPL
ZBTB20
PARP4
VIM
ROBO4
RRAS
BRWD1
DDHD2
FAM207A
AHNAK
TARS2
EIF5A2
TMEM101
KANSL3
ELOVL6
ANK1
HSPE1-MOB4
HSPE1
HSPD1
TAF9
RAD17
AK6
MAP1LC3C
MTMR2
PLIN4
SPEF2
SLC39A3
SLC25A4
PRR7
NKAP
AP1M1
GTF3C3
RIN1
ATP5MC2
FRA10AC1
SIAH1
USP32
MAP2K3
MICALL1
MAP10
COMMD2
STK10
PISD
KEAP1
SUPT5H
CAPN2
PUS10
PEX13
SPIN1
C1RL
MRPL4
KLLN
STRA6
CTF1
SCAMP3
NME1
IL4I1
KIRREL1
SLC25A46
RAC3
KRT18
MAPRE1
PIM1
PRELID3B
SRD5A3
FAAP24
CEP89
TPRA1
RNF168
UPF3A
ZNF846
FXN
RPL34
RBBP5
LYPD1
ABCA1
ENO1
DTNB
YEATS4
C3orf62
NBR1
HERC1
NMNAT1
LZIC
RETSAT
ELMOD3
TRMT2A
RANBP1
RPS19
PARL
STPG1
NIPAL3
NXPH2
DST
CARS1
SH2B1
STX16
CDK5RAP1
FZD5
NR2C1
SMAD7
DONSON
MRPL34
SLC20A1
SLC35G2
ZHX3
WWTR1
DPY19L4
CTNNA1
TBC1D7-LOC100130357
TBC1D7
DENND3
CASP7
POLRMT
MFAP3L
TXNDC11
USP30
RCAN1
WWC2
SMARCD2
NIBAN2
AGK
TBC1D9
FAM227B
DTWD1
H4C14
TNFRSF12A
CPT2
PGM1
SIK3
H4C15
AGXT2
SLC39A7
RXRB
SDC3
DAGLB
RARS2
ORC3
ADPRHL1
IST1
RBMS1
FOXJ3
TOMM70
LNP1
ZNF335
PAK4
MTF2
ZC3H6
CDK18
NQO2
RCOR3
SCNM1
LYSMD1
TPX2
KLHDC9
S1PR1
S100A16
DZIP3
CIP2A
NANP
RPL27
AZIN1
TMEM186
PMM2
LONRF3
KIAA0232
POLDIP3
EMC4
CCDC174
ALG10
PROSER3
HSPB6
NT5DC3
TANK
OBI1
SPRED1
HIC2
PEX14
TMEM259
PHF19
FLNC
H4C12
WASHC2C
UQCRH
LRRC41
ABL2
MACROH2A1
DHX35
RAB11FIP5
RNF220
CCDC186
SP1
KAT6A
SELENOI
ADGRF3
PIKFYVE
CD63
SUCLG2
TBC1D1
MAF1
CCNI
TADA3
ARPC4-TTLL3
ARPC4
C1orf174
LEKR1
TTI2
IRF2BPL
PITPNM1
NEXN
RNF145
ANKRD40
MEF2C
TAF6L
DNPEP
ZNF76
ACTR3
PKD2L2
ITPK1
DEK
INF2
NOTCH2
LGALS1
FBXO11
SLC39A1
CREB3L4
DNAJC11
CSRNP1
KMT2D
PFDN2
NIT1
TMEM182
UBC
KLF7
ZNF395
EIF1AD
BANF1
MC1R
COMTD1
ADD3
APLN
TATDN3
NSL1
OXSR1
TMEM242
MTIF2
ACSF3
FGF1
POC1B-GALNT4
POC1B
RCN1
ZGPAT
ARFRP1
KATNBL1
SEC24C
TEN1
ACOX1
NUF2
NUTM2E
TPMT
KDM1B
SAMD1
ZC2HC1C
ACYP1
ZBTB38
KDM3A
ROM1
EML3
PAK1
ETFRF1
CFAP94
SCD
EPHA5
COQ8B
LRP6
RREB1
OXA1L
SERTAD2
NDRG2
PRKAG2
ARHGEF40
SORBS3
CBR4
SKIL
SSBP1
WDR81
PLS1
MSL2
PRMT9
MOB3A
IZUMO4
PKD1L2
CDC14B
SBF2
DOT1L
AIFM2
EIF4A2
SSRP1
BICD1
SAP25
NQO1
GBE1
ASB1
ALKBH3
TMEM184A
JRK
PLPBP
SEH1L
KMT5B
UBR5
CHD8
YIF1B
BAHD1
ECI1
TTI1
RPRD1B
RBM34
PHACTR1
ARIH2
GRK6
PDE4C
CLASP1
C16orf72
ISY1-RAB43
ISY1
ME3
WDR25
WARS1
VEZF1
NUDT5
CDC123
PHIP
DSTYK
MAN2C1
ZNF276
VPS9D1
GTF3C5
HMCES
HELZ
KAT6B
RBM15
SEC23A
U2SURP
LOC100996750
KRTAP4-7
ROPN1
KRTAP2-3
PTPRS
HMGN2
ARID1A
AADAT
ABHD2
RNF115
POLR3C
MFSD12
ITGBL1
RRP9
PARP3
CFAP20
ZNF326
SIRT4
SUN2
ARHGEF11
ZBTB40
PTEN
B4GALT3
TMEM37
CDKAL1
PSMG2
CEP76
TIMMDC1
MTHFR
CLCN6
PAN2
CCDC106
UBE2I
ROPN1B
CENPM
SERPINB6
TARS1
ATXN7
THEM4
EXOSC4
MBNL1
RPL32
GJC1
PANK2
SZT2
MED8
KLHL36
SLC25A35
NUDT15
SOCS2
H4C11
H4C3
STX18
MRPS31
H2BC4
H4C8
SNX16
H4C2
H4C4
TECPR1
MTRNR2L10
DYNLL1
PCNA
TMCO6
PAFAH2
RBKS
BABAM2
POLR2J3
LAPTM5
CDS2
C2orf42
ACBD4
RHBDD1
GPATCH8
SCML1
ARSB
NRL
DCAF11
PPP2R1A
AKAP1
HNRNPUL1
PNISR
NADK
HINT2
TACO1
MED23
IRF9
RPS7
LBX2
DUS1L
MINDY2
FASTKD1
DMAP1
H4C5
KLF11
IRS1
TMEM256
KLF6
ETV4
RBM28
IPO4
SCAP
FABP1
ARHGAP22
ZNF740
CSAD
PPP5D1
CDKN2D
CALM3
STAT3
WASHC2A
PCK1
POR
MRPL44
AGT
ADAM17
EPM2A
C3
BOLA3
CLTC
KDM1A
TMBIM6
SLC24A1
COQ10A
SPATA1
PPCDC
CEP70
BHLHE40
HPCAL1
MTRNR2L6
MYADM
FLYWCH2
CFB
DICER1
ARNT
RB1CC1
APOA2
MTRF1L
MRPL3
CHD9
OGFOD2
ICAM1
ZCCHC4
DCLRE1B
AP4B1
DCAF10
EEF2
SS18
ANKRD28
SLC25A47
CCDC88A
FUT5
CCN2
NR1D1
TLE6
INTS12
GSTCD
CYB5R4
KMT5A
RARG
COPS7B
TYK2
MTOR
NEDD9
TIGD2
PPP6R3
ZBTB45
PCID2
CUL4A
SLC51B
CYBA
ATP1B1
RNF111
TOB2
RPL38
FGA
CTNNB1
GATD3B
GATD3A
PPP6R1
DUSP9
UAP1
C3orf86
ABCC6
TMEM41B
PLEKHM3
PLCB2
NAT8
F2
MAPKAPK3
CISH
USP42
ZNF341
CCDC77
PSMD6
SERPINE1
C16orf54
CYP4V2
PMPCB
ALKBH7
GSN
CCL15
LIN54
CEP41
TCIRG1
ENOSF1
DAB1
EXD1
CHP1
CHD3
SLC33A1
ACSM2A
APOB
PEX3
ADAT2
RPL37
RBAK-RBAKDN
RBAK
APOA5
PRKAB2
CHD1L
SLC9A1
UBE2R2
SH3D19
DCP1A
INO80C
B4GALT7
AHCY
TP53INP2
HUS1
DENND6A
CX3CL1
ACSM2B
NFE2L2
TEX14
RAD51C
SOD2
ARHGAP4
NRSN2
RPL29
DCK
A1BG
ALDOA
TK1
AFMID
MRPS23
ADGRG3
C4BPB
C2orf49
FAP
MRPL39
EEF1A1
HBP1
DLC1
USPL1
HMGB1
SLC25A45
RARA
IL6ST
TBC1D19
GFER
ATR
IMMT
OPA1
FSCN1
RPS3A
OMA1
PRDM10
PSMF1
CBS
ATP5MC3
ARHGEF12
STAT5B
SSBP2
MBD6
HRH1
SLC23A2
RAD54L2
PLIN2
RAP1GAP2
NOLC1
TRIB1
H4C9
TIMM13
RBM7
C11orf71
NPAS4
LCK
RPS6KA1
DDX5
CEP95
ARHGAP45
THUMPD3
AMBP
CHCHD1
TOR1AIP1
CNOT2
ZNF44
TBCEL-TECTA
TBCEL
NDUFS3
KBTBD4
BNIP1
PSMC3IP
POLD3
MRPL30
MITD1
CDKN2AIPNL
FAM228B
TMEM41A
MGST2
ANKS4B
BDH1
FRG1
IL7R
ERLIN2
SMG6
BCL9L
PLOD2
NFAT5
LNPEP
C6orf89
RBP4
MCL1
NCBP3
CCNC
XKR7
PLTP
ERRFI1
TEFM
PLXNB2
UGT2B10
HAAO
CLIC1
ZNF292
KDM3B
MARCHF8
GNAI2
CDCA7L
ARL8B
SEC14L4
INTS1
NR1D2
RABGGTA
C11orf91
MRPS15
TXNIP
TRAPPC12
RFFL
UPP1
SCAND1
SH3BGRL2
USP3
BHLHA15
MFN2
TBX6
COMMD1
MED9
LMAN1
CAPS2
HEXA
MAMSTR
AARS2
ALOX5AP
DHX8
ARHGEF1
GLTPD2
ZBTB7C
TOP3B
HINT3
RNASEH1
APOM
SLC22A18
PDSS2
STING1
CYP1A1
CREB3L3
MXRA8
ARSG
SGK2
SNX17
HSPA8
EIF2B4
SLC25A51
SF3B6
SERPINA6
UNK
GDPGP1
DEAF1
CIB1
VOPP1
TAP2
CCDC57
EIF1B
PTP4A1
RBSN
FDXACB1
C11orf1
SLC35B1
PRSS27
UBFD1
EARS2
SEPTIN9
RTTN
LRRFIP2
YTHDF2
SERPINC1
PDE8A
GALK2
COPS2
CRABP2
DDX1
HNMT
GORASP2
FBXO31
CABLES2
IL27
VAMP5
GFM1
SLC19A3
TSPAN10
NPLOC4
TNS1
PKP4
NR0B2
HRCT1
ITIH3
RBM45
RBM17
ESRRG
PARP2
FOXP1
LDLR
YARS1
WTAP
S100PBP
MDC1
CCL20
ZNF225
RPL22
ID1
PICALM
SIRT6
KAZALD1
ANKRD24
EIF2D
ACOX2
ATXN3
TF
PCTP
ZER1