ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190223 | SK-N-SH
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◣ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

LPCAT3
RARB
MTRNR2L2
CPA4
SREBF1
DHRS3
WDR74
PDE12
ACACA
ABHD2
SCOC
KCNMA1
FAP
USP32
MTRNR2L8
PRR7
ARHGAP22
ITGBL1
SH2B1
IRF2BPL
NDUFS7
H4C4
H4C11
SH3BP4
ZGPAT
ARFRP1
CHD3
SMAD7
S100A2
H4C12
TECPR1
SMAD3
H4C8
KAT6B
LIMK1
AMOTL2
RIN1
DYNLL1
RGPD2
RGPD1
H2BC4
OTUD7B
RARG
MICALCL
KANSL3
ABCA1
MAP2K3
WDFY2
TNFRSF12A
AXL
SOCS2
KMT5A
ANXA4
AAK1
H4C3
ZC2HC1C
ACYP1
CAPN2
ACSL3
MTRNR2L9
IRF9
NPAS2
LTBP1
LY6K
ZBTB38
PDCD1LG2
MINDY2
SLC22A18
H4C2
TCTEX1D4
BTBD19
LIMA1
CEP41
H4C14
H4C15
PCOLCE
TMEM184A
FSCN1
STAT3
TSPAN4
AHNAK
MRPS31
ECH1
CCN2
SLC41A2
BDKRB1
CLCF1
FLOT1
EEF2
SSBP2
CEP70
CDKN2D
AJUBA
EIF4E
LMAN1
PRIM2
ETV4
TLE6
ITGB2
VGLL4
NFKBIA
IST1
GABARAPL1
DENND6A
SLC25A20
TAGLN2
MED9
CDCA7L
KRT80
GDPGP1
CIB1
CCDC130
CTHRC1
HBP1
APP
RNF145
IGFN1
REXO4
CASP9
MYADM
GSTA4
MICALL2
ZBTB20
SLC25A35
SPRED1
DOT1L
IL6ST
BCL2L13
ZSWIM4
BHLHE40
RBM7
C11orf71
H4C5
ARL14EPL
SKIL
EXOSC4
RBM28
GATD3B
GATD3A
ERCC1
SNX29
OGFOD2
ESRRG
FASN
TBC1D1
NEURL2
CTSA
UPP1
DONSON
H4C13
REC8
UCN2
LMNA
ARIH2
GBA
TTI2
ATP6V0E2
CSRNP1
OSMR
PRKAG2
ZBTB7C
PKD1L2
KAT6A
HRH1
PARP2
HOXC10
PPP6R1
PAMR1
NIBAN2
HPCAL1
POLR2J3
MTOR
RTN4
FGF1
NAMPT
SEPTIN9
FCRLB
TXNDC11
RBKS
BABAM2
MTRF1L
NUDT15
ATXN2
GPRC5A
WDR81
APOM
BAG6
UBE2T
RUNX1T1
TRAF3IP3
TBP
PSMB1
SMARCD2
RBBP5
GLIS2
ZYX
DENND4B
STX18
ZNF76
ALDOA
SLIRP
ALKBH1
PLEKHG4
PIKFYVE
SLC24A1
TIMM13
RRAS
CCDC174
SMIM20
AOPEP
LEKR1
PITPNC1
MSANTD3
PTPRH
HRCT1
PHF19
MXRA8
ST6GALNAC3
COTL1
WDR25
WARS1
KBTBD2
PAFAH2
KCTD11
TACO1
NR3C1
TRMT2A
RANBP1
SEMA5B
LYPD1
SLC26A11
HMGN4
SAT1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PMPCB
ATP7A
PCNA
CDS2
ADGRG1
RARA
TBL1X
MAP1B
ZNF503
MGAT5B
PROSER3
HSPB6
MAGOH
CDH18
CAST
MTF2
FRA10AC1
KDM3A
DCLRE1B
AP4B1
GSN
SRSF2
MFSD11
CCDC57
SPRED2
GPATCH8
NKIRAS1
NR1D2
HSPA8
NEBL
PPP6R3
PCTP
SPATA1
GNG5
RBM19
FSTL3
MAP3K7CL
PRDM10
GPR39
FLYWCH2
SYTL2
TMEM259
STMP1
SCARB1
DYNLT1
COLEC12
ZFAND3
SH2D7
CBX5
TMCO6
BOLA3
CBLL1
CRYGC
LIMS1
ARHGEF6
CNOT2
FLNC
LYPLA2
STING1
DZIP3
CIP2A
TBCEL-TECTA
TBCEL
CLK3
PLAT
EPM2A
SLC25A45
MCL1
ETFB
L3HYPDH
ATXN3
PNISR
CHD9
IMMT
ETS1
HYKK
PTPN12
SRCAP
LOC730183
MRPS23
ARID5B
TNFRSF9
GFER
NLRX1
GPN1
CCDC121
PEX14
ITGB1
MAST2
LSMEM1
MIEN1
ACTA2
TFPI2
OTUD5
MLYCD
NME1
IFRD1
ARNT
FOXP1
RAP2A
SMG8
FOXN2
ANKRD1
ZNF740
CSAD
PDE8A
ZNF225
CTF1
CYREN
ATP5MC2
ARAP3
TAF6L
FAAP24
CEP89
ARHGAP23
ETFA
DMAP1
USP30
SIRT4
RCAN1
MICALL1
ZCCHC3
RASGRP3
CHMP4B
RNF182
FZD1
THUMPD3
SSH1
PARL
LNPEP
TEX2
PER1
NOLC1
PCBP3
HIBADH
CCDC107
CCN5
IBTK
KRT8
NNMT
KRT18
KANK2
SPOP
MPP4
AP5S1
NUF2
NOL4L
ZNF212
GPKOW
ANKRD50
ACAA2
RBM15
CLK2
TMEM41B
PDSS2
UNK
CAPZA2
HNRNPLL
SRI
CHI3L2
BCAR1
CDK6
PHACTR4
MFSD6
RPS7
ASNSD1
ASDURF
MRM1
OLFML3
MFAP2
AGXT2
MAML3
OPA1
LRRC59
DMPK
STX16
ZNRD2
DUS1L
CCNC
METTL3
FKBP14
CFAP69
CFL2
PFKFB3
CIITA
TMEM101
SMIM12
SYNC
VIM
TTC26
EHBP1
PSORS1C1
PLEC
POLDIP3
PICALM
NCOA7
SSC5D
COX16
SPAG16
CREB5
DAB1
HUS1
OMA1
CLK1
LMO7
MRPL21
IGHMBP2
IQCE
ALKBH2
MRPS18A
AGAP3
PLK2
HMGA2
AIM2
ACOT11
WWTR1
CUL4B
MRPL44
SERPINE1
MAPKAPK3
CISH
KLLN
LOC114841035
FKBP2
DLG4
ACADVL
WASHC2A
EMP3
AKR1B1
PIK3R1
EEF1AKNMT
NOTCH2
RB1CC1
ZNF292
TAF1A
HIVEP1
CHCHD1
BSDC1
SRRM3
SCAMP4
ADAT3
SNX16
ACADM
KHK
TCF4
SERTAD2
COQ8B
KMT2D
HERC5
DCAF10
AGK
HECTD4
MCRIP1
BZW2
IFIT3
UMAD1
CDC42EP3
ATP5MC3
SPNS1
THAP9
SEC31A
SZT2
MED8
USP9X
ZNF446
LAMP1
EMC4
ANG
ZNF395
CDKN2AIPNL
KPNA7
AKAP10
TBX6
HSD17B14
FAM156B
FAM156A
DPP9
GNAI1
EMILIN1
EMP1
CASD1
RPL37
BGLAP
SLC39A3
SSBP1
TMEM41A
RNASEH1
E2F6
SH3TC2
CALD1
HDAC7
CCNL1
SYNPO
MIDEAS
DDIT3
SEMA3C
OR1F1
PSAP
NFAT5
GNAI2
C12orf73
ZNF3
PXYLP1
PRND
MTSS2
TXNIP
INO80C
ARPP19
C10orf88
TPRA1
MED23
RAD54L
KNOP1
ZKSCAN5
DYNLL2
CEND1
ECI1
ID1
FBXO46
BCAP29
LTA4H
KAZN
FRMD4A
MRPL34
TARS1
DUSP6
RAB30
S100A16
MRPL3
MAZ
ZFP36L1
RAPGEF2
CXXC5
AKAP1
OXA1L
TP53INP2
USPL1
HMGB1
RFFL
RBM45
GAL3ST1
WNT2B
ZNF282
SIVA1
ATP10D
STON1-GTF2A1L
ARHGEF17
ADAM17
CYB5R4
SACM1L
POPDC2
SUGCT
MPLKIP
ABHD14B
ABHD14A-ACY1
ABHD14A
SHF
SF3A3
SLC30A1
ATG5
RNASE4
S100A3
RTTN
RPTOR
COX8A
RGS4
WBP1L
GULP1
CREB3L2
CAMKK1
DHX8
CXCL8
CTCF
STX3
FOXD1
FN1
ALG10
COMMD4
MIGA1
TP53I3
TPT1
TLN2
ETFDH
C4orf46
ANK1
GGT7
PRMT5
SBF2
NDUFA12
TMEM209
KEAP1
TMEM51
RINT1
NUDT3
HSPA6
PSMC3IP
TEFM
SRSF9
TACC2
DDR2
GBE1
PCCA
FRG1
MFN2
U2SURP
MNAT1
ERCC6L2
COX18
CELSR3
CD63
SLC33A1
MEF2C
THAP4
ATG4B
S100A6
TCF12
IKBKG
MGP
BIN1
TRIP12
FBXO36
MAN2C1
MDC1
LRRC37A3
NDUFAB1
PEX2
SLC4A8
NHS
MRPL38
DRG1
PEF1
ILF2
MTLN
FAM3C
CUEDC1
ACTR6
OCIAD1
TSPAN10
NPLOC4
MED4
GTF2H2
GRK6
STK17A
DNAJB1
TNC
SUN1
MICAL2
UPF3A
ARHGEF12
MTERF1
SRXN1
AGFG1
VPS28
VIRMA
PRUNE1
MINDY1
NUP42
PSMA1
PRTG
REM1
INTS12
GSTCD
EXD1
CHP1
ALG10B
H4-16
KBTBD7
TGFBR2
KPNB1
CGRRF1
CFAP20DC
SCRG1
PROSER1
NHLRC3
MMP2
COL1A2
TOB2
ALOX5AP
TNS1
ZDHHC4
MTFR2
PPP6C
TRIM16L
PPP1R18
HMOX2
CCDC114
ACBD4
INTS1
C17orf75
CD8A
CBFA2T2
NSUN5
FAM228B
SF3B6
GORASP2
PRRG2
NOSIP
SCRN2
DTNB
ZSCAN25
RBPJ
STK40
HNRNPH2
GLA
EIF2S3
C20orf141
ELOVL6
WASHC2C
SH3D19
ENO1
AZIN1
SLC22A4
RNF139
CCDC71
DPYD
HIC1
RPL38
AHCY
MRPL58
MTHFD1L
PDPR
TBCCD1
DNAJB11
PLAAT3
XYLT1
MITF
RBMS1
PLEKHM3
USP3
GSE1
UTP3
ZNF609
COIL
BCL6
MBNL2
R3HDM2
USP42
RBAK-RBAKDN
RBAK
MTHFR
RAB5IF
CLCN6
AVPI1
RIOK3
CYTH1
RFESD
SHBG
SAT2
HELB
MKLN1
PTEN
COL7A1
ANTXR2
PPEF1
CELA1
OBI1
KRTAP2-3
EIF2D
BAZ1B
EXOC2
AK2
NBPF15
MAD2L1BP
PKN2
LIN54
VAMP5
ATXN1L
PIWIL2
NUP133
KDM1A
SLC1A5
WDR70
LAMB3
AP5Z1
SLX1B
SLX1A
BOLA2B
BOLA2
SAMD4B
TMEM248
BOLA2-SMG1P6
RXFP4
RHOBTB2
ACAD9
WWC2
KRR1
GPCPD1
PPIP5K2
DAW1
AP3B1
OGDH
PALLD
LAMC1
ELK4
ANKRD28
NFE2L2
KMT2C
IDH1
NOL7
BMPR1A
ZSCAN9
MRPL2
KLC4
CEP120
SOCS3
PARP4
PCID2
CUL4A
CRABP2
AGO2
ZNRF2
TRIOBP
SERPINB7
MTRNR2L10
IL4I1
POLR3E
COX7A2
CUEDC2
GUSB
TRIM6-TRIM34
TRIM6
SIPA1L1
POLR2K
SCAP
DLC1
H4C9
RRP9
PARP3
RPL22
PA2G4
CLUL1
TTC39C
IQSEC3
EDC4
RANBP2
CENPA
C18orf25
FNIP1
SPRYD7
GOLGA1
DVL2
SOX12
RPS6KA5
DGLUCY
RCBTB2
SDHD
HIF3A
CFAP46
DCP1A
TBC1D19
DGKD
METTL25
CCDC59
METTL2B
IQCN
GADD45A
CTBP2
DLAT
DCT
SPA17
SIAE
YIPF2
TIMM29
RRAGC
GMFB
GSPT1
SNRPE
BAIAP2
KIF15
KIAA1143
MRPL12
ZDHHC3
EXOSC7
SLC14A2
TIMM23B
PARG
ZC3HC1
CDC25A
CLDN2
RPS29
PHLDA3
MRPS28
C16orf95
TOP3B
SAAL1
NOCT
PLK3
CHKA
C16orf71
BMERB1
ANKS3
HNRNPUL1
SRRT
SLC35A4
APBB3
MTCH2
RPL24
CIB2
ZSCAN32
ZNF174
WDR4
NEK10
ANO6
ZER1
HES1
AFF1
NEURL4
NDUFC2-KCTD14
NDUFC2
CEP128
JUN
SPIN1
METTL9
IPPK
HEXIM2
PIGBOS1
PIGB
NREP
RB1
DSTN
BFSP1
CDK5RAP1
TK1
AFMID
MTIF2
YTHDF2
ATF6
CAV1
DNMT3A
PMS2
AIMP2
DDAH2
GATAD2A
C8orf37
YWHAZ
ECSCR
COQ5
ASB1
HEXA
MRPL16
TEN1
ACOX1
PSMD9
HPD
DKK1
POLR2M
NDUFB7
DDX41
GPBP1
SH2D5
SEC14L1
ZBTB21
DAB2
MIA3
RARS1
DEDD
ZNF674
TUBB6
TICAM1
EHD2
COL1A1
PDE4DIP
COPS7B
NPAS4