ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
ADNP
SLC2A10
DUX4
BCL3
TRIM3
TIMM10B
MTRNR2L2
MSH3
DHFR
STARD10
PLCB4
RTBDN
MAST1
POLR3B
MTRNR2L8
ARL14EP
MYADM
BMP7
SLC23A1
PROB1
MZB1
METTL25
CCDC59
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPL44
C9orf152
FLYWCH2
PCCA
REXO4
ADAMTS13
ARHGAP40
TET3
ERGIC1
EXOC2
PSMD6
S100A16
S100A14
MOB4
TMEM87B
AFF4
KIF5C
KRT8
KRT18
WDR74
STX5
COL23A1
CUEDC1
GNPNAT1
STX16
TACO1
PSRC1
SPRYD3
NOL11
ZNF500
EAPP
PMF1-BGLAP
PMF1
PTPRN2
UCHL5
RO60
TARS2
ZNF609
MUC5B
ANKRD60
ART1
FLYWCH1
BAZ2A
TTC39A
NOTCH2
PMEPA1
SMG8
LMNB2
MAMDC2
MUC3A
IQANK1
FAM83H
PAQR4
KREMEN2
ARHGAP39
KMT2C
ZFP36
PLEKHG2
N4BP3
TOP3A
SMCR8
TNFRSF1A
FAM221A
FRG2C
SCAMP1
FASN
ZNF217
SKA2
PRR11
CYRIB
FAM20B
USPL1
HMGB1
INKA2
DDX20
SNAP29
PI4KA
MADD
REPS1
ALG8
DNAJC10
GNAQ
DYNC1LI1
REXO5
ERI2
EMB
DSTYK
EIF1AD
CST6
BANF1
LDAH
IPPK
GGPS1
ARID4B
MTRNR2L1
MED23
GRK6
EED
SCARB2
FAM47E
SEC16A
C9orf163
CEP63
ANAPC13
ZNF860
OSBPL10
FOXA1
MARCHF7
ZNF408
ARHGAP1
DPY19L4
TPD52
BCAS2
DUSP6
EDN1
HIPK1
VPS13B
FAM240C
ZG16B
SNRPB2
LEMD2
TRIM48
SNAPC1
FAM207A
SPOP
TRIM37
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
CPNE8
ZNF518A
RPS7
NDUFS3
KBTBD4
FAM180B
SMIM14
RUSC1
FLNA
EMD
ZC3HC1
WDR24
STUB1
RBBP5
PHRF1
JMJD8
USP32
PSMB7
LSG1
IER3
FLOT1
INTS12
GSTCD
ECT2
TBC1D30
ZMYND8
DCAF10
TMEM199
SEBOX
POLDIP2
FAM227B
DTWD1
SLC25A36
BCAS4
VPS37B
TOB2
CNOT3
TOR1AIP2
TOR1AIP1
NEK5
NQO1
USP38
GSE1
MLPH
WDR11
NECTIN1
ID1
ATP5MC2
CNBP
BLOC1S5
CARMIL1
AP1M1
TAFA3
PPM1J
PPM1H
PGK1
PMPCB
AP3B1
APPBP2
MAPK9
SCYL3
TFF3
RTEL1
STMN3
WDR97
MAF1
CYC1
CXXC5
RBSN
MEF2A
CA4
SP1
SPHK2
RPL18
FAM83E
TEX14
RAD51C
TMEM210
LRRC26
NOXA1
IFRD1
DEDD
TMEM262
COMMD2
CHD8
KANSL3
FER1L5
GABPB1
TRIM33
DNAJC25-GNG10
DNAJC25
SWSAP1
PRMT6
GSPT1
EPOR
FFAR2
UNK
H3-3B
CPOX
MICA
SLC39A6
ELP2
ARL8B
CCDC200
CYREN
MUC2
PHF14
PCYT1A
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SLC34A3
SCNM1
RNF224
RNF208
LYSMD1
CYSRT1
ADPRHL1
PLXNB2
UST
PLA2G15
ESRP2
SH3YL1
MRPL1
ACP1
SULF2
KMT2A
TFF1
RASEF
KRR1
MDM4
SYNGR2
MRPS33
ZBED8
DGKA
OTUD7B
TTC6
PPIP5K1
PDE8A
H2BC21
H2AC21
H2AC20
CKMT1B
DEXI
CLEC16A
TLNRD1
TSPAN13
TMEM183A
SLC33A1
NRAS
LNPEP
TOP3B
TCAF1
UTP25
USP9X
SETD9
LUC7L2
ALG10
ZNF446
ZNF324
ATAD2
PPM1D
ZFP62
GOLM1
EEF2K
TMEM251
MOAP1
PMVK
EPHB3
SNRPB
PSMA5
NBEAL2
CCDC12
CLTC
VMP1
PTRH2
LRP6
KAZALD1
LPCAT1
ARHGAP8
TSEN54
LLGL2
CASKIN2
ALG10B
IL2RA
DDX59
BRIP1
ZNF410
PPP2R5E
INTS2
ERBB3
BRINP3
EGR1
CIAO3
ZNF197
TBPL1
RPS29
RPL37
PPP3R1
PPIP5K2
MMADHC
CARD6
BCAS3
TRIP4
RHEBL1
PCLAF
KMT2D
GSK3B
FMO5
PDS5A
FRG2
GRIK3
BZW1
ZBTB7B
PLCG1
LINS1
LENEP
ASB7
NCOA3
KIF26A
HNRNPA2B1
CBX3
ADH5
SYCE1L
MON1B
HEATR6
ATR
SGPP1
LSM5
AVL9
SLC24A1
YIF1A
TMEM151A
PDE4DIP
PSMC5
FTSJ3
GNPDA2
B3GAT2
TSKU
NPM1
TPTE
TPD52L2
ABHD16B
NEDD4
ATXN2
RCAN1
RAB1B
ERCC6L2
TOMM22
CRNKL1
CFAP61
RPL12
LRSAM1
KIF22
DDX23
TANC2
ZDHHC1
TRIB3
ZNF655
FAM200A
CST3
RGS19
OPRL1
LKAAEAR1
KMT5A
CST4
TDRD10
SHE
CST2
DMTF1
SYT5
DNAAF3
FAM228A
SLC16A5
ARL4D
LOC102724770
DGCR6
PALM3
MISP3
CST1
P2RY6
GALP
RPL32
POLR3F
DZANK1
DPF1
RAPGEF6
RPS26
LAMTOR1
ANAPC15
SLC25A40
DBF4
SPTBN4
BLVRB
PPL
PHC2
SGO2
GORAB
SNX1
CIAO2A
NARF
CYBC1
NKX2-8
C6orf89
SLC1A5
TNS4
MTOR
FAM72D
FAM72C
ODC1
ETV2
COX6B1
RDH5
CD63
CCDC97
SLIT3
CALCA
ZFP37
RMND1
ARMT1
UBE2K
UNC45B
NLE1
ZMAT2
HARS2
HARS1
BCL2L13
ATP6V1E1
WDR55
DND1
NAPSA
ITGB5
CCDC102A
TEP1
CDC42EP4
ASNSD1
ASDURF
ZNF576
IRGQ
CCPG1
C15orf65
RAC3
LRRC45
DCXR
CENPX
TRIM59
ZNF106
SNAP23
SLC51B
SDHA
CCDC127
FAM72A
TPCN1
C3orf35
RPEL1
SLC10A5
IMPA1
AP2S1
PRORP
PPP2R3C
ESM1
GLYATL1
SHKBP1
RPS6KB2
PTPRCAP
MDFI
EIF4A2
ZNF335
ING4
SERPINH1
RUVBL1
SCIMP
B3GNT2
DHX8
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
TTC9B
MAPKAP1
CCNP
CLDN23
UEVLD
PSMD14
CELF2
UBAP1
SLC7A8
RABEPK
CAV3
CTDSP2
RIPOR3
TEN1
ACOX1
MPEG1
ZHX3
COMMD1
CCT4
ACTN4
KRT86
UBR7
GON7
EMSY
METTL3
UBL7
DRD4
TNNT1
TNNI3
RIN1
NME6
FUT10
ZNF546
GRPEL2
NOS1AP
TVP23B
TBATA
TSC2
NTHL1
BHLHA9
PFKP
VAMP2
RIC3
GTSE1
PARD6B
CCDC61
HNF1B
RPS16
ZNF512
C2orf16
COLEC11
EIF2S1
ATP6V1D
RARA
NUDCD3
EPB41L4B
NMT1
DCAKD
MAPK13
ETFA
SDSL
NEU2
TRIM17
TRIM11
CEACAM3
TTC14
RGPD2
RGPD1
IL12A
EFCAB2
SFTPB
EYA3
BTG2
MAFK
TRIM4
GJC3
ELL
MTRNR2L9
MTRNR2L10
ANKLE1
CFAP58
SCAND1
RB1
VPS26A
TMEM129
TACC3
SLBP
MRGBP
GATA6
SPOPL
RAPGEF3
EIF2AK1
CLDN4
TIPRL
KATNIP
GTF3C1
FAM214A
SLC25A32
DCAF13
ANTXRL
F2RL1
RPH3AL
PLAUR
FAM72B
THEM4
PTER
PDE11A
NACA2
PRKAB1
TMTC3
FNBP4
CEP290
TKFC
NFKBIZ
FUT4
DDB1
MYEOV
MRPL33
ADORA2B
TRIM35
PTK2B
RAD51AP1
CLDN2
C12orf4
PLA2R1
NPDC1
EXOSC5
ENTPD2
BCKDHA
RWDD1
MAML2
TAT
PRRC2B
KLHDC8A
SULT2B1
MVD
ZNF705E
HMG20B
PLCD1
SRP19
PGBD4
ERCC1
EMC7
UNC45A
TMEM51
SPAG9
HDDC3
DCP2
TXNDC5
ANKRD33B
SNRPA
PMP22
KCNAB3
CNTROB
C19orf54
SPEF1
MID1
DISP1
CENPB
CDC25B
UAP1L1
SAPCD2
PCM1
HES7
ALOXE3
NAV2
UBE2L3
RIMBP3C
RIMBP3B
TUBD1
TMEM87A
RPS6KB1
GANC
TMBIM4
STAM2
HLA-E
VAMP1
VAC14
C9orf64
ALDH3A1
RAD23A
FARSA
CALR
RBM19
RALGPS1
CNIH3
RABEP2
NDUFB8
HIF1AN
HDAC8
H4C8
CD19
ARG2
SECISBP2
RPS19
CKS2
BIN2
FITM2
PROS1
KPNA6
CCDC22
CACNA1F
ARL13B
ABCA3
MFSD2B
MPPE1
CLMN
ANKRD13D
FXN
ZNF366
ZNF165
OR1F12
C11orf49
NPTX1
BECN1
SOAT1
PRKAG3
ESCO1
USP43
SYT12
LAG3
SLC35B1
CLCN4
ZNF331
TRMT6
MCM8
DDA1
AATK
TJP2
PNPLA5
SMARCC2
PIGM
KLHL9
HLTF
EPB41L1
EIF4B
DGKD
COX7A2L
WRAP53
TP53
MPZL1
STK33
RIPK2
REEP3
OSBPL7
LRRC46
JMJD1C
SHISA5
MAP1LC3C
PPIL2
PCIF1
NDUFA4
ID2
CLCN5
SLC39A4
METTL18
GPAA1
GALNT10
EXOSC4
CPSF1
C1orf112
RANGAP1
FRAT1
LOC100509620
ETFBKMT
VPS11
SNED1
CTTN
SH3PXD2A
GOLGB1
TNFRSF10B
NAGPA
B4GALNT3
PIP4P2
CKMT1A
TP53INP1
TFB2M
MEIG1
DCLRE1C
CNST
NOSTRIN
DCLRE1B
CSDE1
AP4B1
GLB1L3
NEK6
SELENOV
DLL3
C3orf14
APBB1
TEFM
SDHAF3
SASS6
FNTB
DDX58
NCR3LG1
GLUD2
EDN2
DPY19L3
ZNF670
NDRG1
RNFT1
BNIP1
EEF1AKNMT
ZNF180
PROSER1
NHLRC3
ABR
SMAD3
CIC
GLRX
TBX4
CDH1
MMP9
MUC5AC
STMN1