ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3075718 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◣ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

HGC6.3
CPNE7
ADCK5
BRD3OS
METTL26
WFIKKN1
MVD
MAMDC2
IFITM10
SSBP2
UNKL
PYDC1
VCX
PFKP
SLC25A41
KHSRP
MUC17
SLC19A1
ZHX3
GLIPR1L2
ZBTB37
LRTM1
OSGIN1
BAIAP2L1
GFI1B
HEXIM1
CRHR2
BTBD2
CCDC57
ANO7
RAD23B
GCNT3
ELSPBP1
BSPH1
PHACTR3
YJEFN3
CILP2
CXXC5
TP73
PBX2
GPSM3
TTC16
PTRH1
SBNO1
STXBP1
MAFK
RGS9
HDDC2
FBRS
CUL3
PBX1
SPI1
C11orf95
ULK1
TMEM86B
SP4
TRAPPC9
FST
PRR29
COLEC10
ETS2
ABR
PXDN
CNOT3
CAPN12
IFI27L2
IQUB
C4orf19
VGLL4
USF3
CIB3
VCX2
USP22
SPRING1
RNFT2
NAPRT
MROH6
UBE2L5
PRELP
ZCWPW1
MEPCE
SPATC1L
CMKLR1
KASH5
CACNG4
ESRP1
SPOP
GOLPH3
SCYL3
KCTD9
CDCA2
COTL1
JRK
FZD8
MRPL58
SETDB1
CLDN34
AHRR
SMARCD3
CALY
H3-3B
CDK18
FIBCD1
TOR4A
SLC29A4
LARP1
LPCAT4
CACNG6
LY6E
TRIB1
KLK4
SYNGAP1
MRC2
CUTA
THSD4
LOC101928841
CORO2A
MAP1B
OR10H1
CLN3
APOBR
NPRL3
EFNA2
ATXN7
KDELR1
GRIN2D
ZNF512B
MYADML2
KLK14
AK1
VCX3B
RAB6A
IL17RE
ARF3
MTRF1
SMG7
VLDLR
SIGIRR
MSRB2
C10orf67
SUZ12
SPIRE2
PHLDB3
TNNI3
INTS1
C1QTNF12
C17orf58
DSTN
BFSP1
SPEF1
CENPB
CDC25B
PI16
P2RX1
PRR12
EYS
TTYH3
PELI3
USP34
MFNG
TLCD1
NEK8
SLC8A2
PHF21A
AGXT
FGF12
MTRNR2L8
BIRC7
MTMR4
LRRN3
ADAP1
TMEM65
VCX3A
PRTG
BDKRB1
ARFGEF2
MZF1
MINAR1
KNDC1
CATSPERG
RASSF2
LCN12
FRMD6
ZNF524
FIZ1
SLURP2
OTOF
SP3
SNAPC4
CBLC
USP38
BCAS3
DNAJB8
JPH4
CMBL
RASA4B
INTS9
HMBOX1
TUBA1C
C17orf64
SLC43A2
APOH
NOS3
TLK1
SLC6A18
SP1
RNF43
DRC7
TSC2
NTHL1
USP32
HECW2
UPF2
KCTD13
POLK
CERT1
SPACA6
MSI2
ARL6IP4
MEAK7
FOXJ2
CABP2
MLXIPL
LARGE1
APPBP2
ACTR3
CLTC
ALKAL2
TFEB
MECOM
PCNX1
DACT3
RASA4
NAV1
CADM4
LRRC6
CAP2
ECH1
FEM1A
CCDC8
CACNA1S
ASCL5
RSF1
AAMDC
FOXA2
C16orf72
ITPR1
MYADM
MAML3
RECQL4
NIM1K
MFSD3
LRRC14
BCAM
URGCP-MRPS24
URGCP
NAP1L5
RPH3A
FAM240C
EFCAB2
CDC42EP5
CTCFL
PALLD
CST3
KCNQ2
SIPA1L2
ZNF148
TMEM18
LCN6
AMMECR1
HS3ST2
ZFP41
GOLGA6L10
PITPNM3
SNX16
PUDP
AP1S3
GPR78
OCLN
FBXL19
TMEM40
RAMP3
MMP15
LHFPL2
KCNC3
IGLON5
GREB1
DDI2
SLC7A2
MED6
SATB2
NPEPPS
PHF23
GABARAP
DVL2
CA4
RCAN3
FOXK1
ESRRG
SLC13A3
TMEM63C
PCBP2
CDH22
ITIH5
CCDC200
ADNP
KLHL23
RASSF5
ACTRT2
NKX2-1
HTR1F
DYNC2I1
CREM
MFRP
C1QTNF5
DYNLL2
OR10H5
POU2F1
RRM1
SRSF9
DYNLL1
EOLA1
LRGUK
MYL12B
IL26
PRDM11
TXNIP
LMTK3
ABI1
NIBAN2
MDM4
ZNF205
CNPY1
ARID2
KLK7
KCNK15
GTF2H4
CANT1
FAM71E2
TAF6L
FBXO11
DPH1
ATP1A3
SERPINA3
PI4KB
MTRNR2L2
MSH3
DHFR
PAK1
LHX6
VNN2
PDXK
BRD2
PPM1D
DHX34
BBX
NR5A2
ATXN1
CREBRF
KRT8
SIGLEC15
CMIP
OSR2
ZFR
AHCYL2
SKA2
PRR11
HSD17B14
PLXDC2
LMNB1
PTPRH
BCAT2
LRRN2
ADAMTS9
PDE4DIP
VILL
PLCB1
MTRNR2L4
NPR1
LAMC1
TMEM170A
PRSS27
HERC4
EDN1
GNAS
CA11
BRIP1
BARHL1
AMZ2
SMG1
PABPC1
GAB2
MAP2K2
HMGB4
HDHD3
CYP24A1
RALY
PPP1R3E
BCL2L2-PABPN1
BCL2L2
CCDC112
KCNN4
HMGN1
KMT2E
NPAS3
LRATD2
CCDC149
CROCC
STX16
WDR26
TMEM187
HCFC1
MEF2C
TSC22D1
AAAS
ARC
GNG8
WBP1L
STAT6
LMBRD1
ERICH6
ORAI2
GTF2IRD1
DCUN1D2
SBK2
COMMD3-BMI1
COMMD3
BMI1
LHX9
PPP1R21
GRHL3
CPVL
CHN2
PPP2R5C
MRGPRE
CPLX2
RUNX1T1
BCAP31
ABCD1
PRPF40B
ORC4
MBD5
UBE2B
CDKL3
KLK6
SLC25A19
NCOA3
CCK
HOXC11
GZMM
ZNF131
GRP
APCDD1
SEC13
ERF
BCL11B
NTNG1
SOCS2
KLHL26
PHF2
INSM1
ATP4A
TMEM190
IL11
MSRB3
MRPL38
LDB2
CGN
S100A16
MADD
PTGIS
PRKCZ
DDX59
SCYL2
DEPDC4
PRAC2
PRAC1
DOK5
COL6A1
RIPOR3
N4BP3
RNF19A
RARG
IL17D
TRA2A
KLHDC10
ATXN7L1
ZEB1
SHOX2
RSRC1
TSHZ2
KIF6
FGD3
ADAMTSL4
TMC4
TSPAN32
ROCK2
C11orf21
TMEM126A
CRY1
LSP1
KRT23
GATAD2B
FOXQ1
ZNF574
TMEM271
SLC6A1
GRIK5
NFAM1
KCNIP2
BTBD18
TAF7L
PPP1R16A
FOXH1
COL20A1
PHF7
BAP1
PRRC2B
ID2
FAM104A
PPP1R13L
POLR1G
ZNF605
RIMS2
EDN3
SCAF1
RRAS
NPC2
MIR1-1HG
ISCA2
SP2
CAMK2D
RNASEH2C
IRX6
TM4SF1
TMEM30A
RBM27
CXADR
GDF6
ARRDC4
BRPF1
CAPN1
GABBR1
FAM163A
E2F3
ATF7-NPFF
ATF7
SEZ6L2
ASPHD1
UNC80
EFS
TLCD3B
LIN7A
UBTD2
LTBP4
SERPINI1
PDCD10
HRAS
RNF139
KSR2
CDKN3
TFAP2A
KRT82
GPIHBP1
CHD9
RNASE4
ANG
TNKS1BP1
TRAPPC2L
MAGED4B
MAGED4
KCNB1
GALNS
DNAJC27
MTOR
DPEP1
TCL1B
FKBP5
ARMC12
SDC2
LHX4
CYP3A5
TTLL10
TASP1
GJA1
ZNF709
TBX4
PRPF40A
KLF10
ARL6IP6
TRH
KCNH3
GSC
AGR3
FOXN3
ANP32B
KRT80
CIART
AJM1
PTK6
NPIPB15
TNPO3
CFAP410
WNK1
SIPA1L1
IREB2
SQSTM1
MGAT4B
LENG9
OR2AT4
LRRC8E
PPP1R15B
PERM1
HAS1
UNC93A
COLEC11
C1orf21
AURKC
TMEM26
NUDT16L1
GPR45
DUSP4
ZNF384
HSPA1L
HSPA1A
TMEM229A
CPNE6
ADGRF5
FADS2
FADS1
CXXC4
MARCHF6
SBK3
PDE1B
PRAME
PAN3
DICER1
ADRM1
TAS2R16
RNF41
NABP2
CTDSP1
TRIM8
PRSS22
MYOZ3
KRT35
SULF2
CYTH1
RGS13
NUCKS1
GABPB2
EIF4B
BCL2L11
RAP2C
HIF1A
RORC
RIN2
LRRC4B
DCAF5
ZNF462
STMN3
RTEL1
PRSS8
PPP2R2C
DGKH
ALMS1
RPA2
IER5L
BPTF
FIGNL2
FAM214A
DRAP1
C11orf68
ZNF768
TECPR1
JDP2
INPP5F
SSH1
PPFIBP1
NYAP1
SOX4
SH3KBP1
C14orf132
SGCA
RSPH6A
PTGIR
IKZF2
CTBP2
PODNL1
DCAF15
TCFL5
KCNK3
TRIM56
POLR2H
CLCN2
SV2C
MAD1L1
TTC6
FOXA1
WDR74
TRNP1
GRK6
ACAP2
MMP19
JARID2
SKAP2
PCF11
BACE2
SCN1A
KYNU
AFM
TRPV6
CACNB4
S100A10
RC3H2
EBNA1BP2
CFAP57
TMEM119
NRL
DCAF11
TNS1
FAM117A
COL5A1
SHISA7
NRCAM
UBR3
TMEM88B
SEMA3F
METTL5
CSNK1D
BCAS1
ATXN7L3
ARNTL2
TPTE
STRN3
AP4S1
ADGRG1
SLC39A7
RXRB
HSD17B8
HES1
AMHR2
FRG2C
SCLY
UBE2Z
IQCE
RHOC
ZMYM2
ZBTB20
NKX3-1
CGNL1
TRIM41
MLLT10
SPACA4
SKIL
PRAMEF8
PRAMEF7
CDV3
KLHL22
CMPK1
ZFP36
PLEKHG2
PGAM1
POFUT2
PDXDC1
RHOD
GOLGB1
CLEC3A
BCL9
MUC1
FAM168A
DUSP16
ADCY1
SCRT1
TMEM94
SNRNP200
ALPK1
TEDC1
CRIP1
UPK3BL1
MED25
UCKL1
TM4SF19
PRL
CPLX1
BNIPL
HES3
SELENBP1
TMEM245
GJA5
SMURF1
B3GNT6
XG
UBR5
RAPGEF4
PTPRCAP
FABP6
TRIM9
RAP1A
PLBD2
BICRA
AADACL4
RAB11FIP2
ZFHX3
TSPEAR
SH2D3C
PFKM
SYNCRIP
USP35
TOP3A
SOCS5
SMCR8
KCTD21
ELF2
DCDC2C
UBE2D3
SIX4
PPP1R9B
CD5
BASP1
ASPHD2
ZNF71
KLHL36
CD63
NEDD4
LGI4
FXYD1
SCAF8
FRG2
FOS
TSC1
SYTL2
ADGRG3
ZBTB9
YWHAB
SH3PXD2B
CXorf65
ITGB2
PHF1
NOVA1
TRMT1
SPOPL
NACC1
FEZF1
DQX1
ASTN1
ACOXL
UBE2R2
FBLIM1
RABGAP1L
PNPLA7
MRPL41
ARHGEF5
RCVRN
RAB5B
MIDEAS
AMPH
KCNJ15
ZSWIM6
TRIM46
SEPTIN2
NUP155
MAPRE3
KRTCAP2
HDLBP
TNNT1
TC2N
PGR
RPS19
FUT7
FOXR1
B3GALT4
MPG
KLF4
DNAH2
SH2D4B
RASGRF1
POLR3GL
LIX1L
GOLGA6L3
DLX1
ANKRD34A
TMEM256
PRR5L
PLCXD1
NLGN2
GAB1
CBX8
MFN1
HSD3B7
LYPD4
DMRTC2
LYPD5
ARHGEF35
AMOTL2
BIN3
AP1S2
FAM163B
JPT1
FOSL2
NGB
EYA4
ZDHHC17
MAPK11
ALAS1
IQSEC3
VIPR2
STAU2
EFR3A
CST4
WDR18
RNASE6
BACE1
RIF1
HNRNPF
GALP
GABPB1
CCNI2
APOC2
PFDN4
TSEN34
PRTN3
MBOAT7
IER5
DBN1
XIAP
TRPM2
PTCH1
B3GALNT2
SAA1
LRCH4
ILF3
FBXO24
CRHR1
MAPK3
TPK1
MAP3K7CL
CLDN12
SSTR5
CLEC4O
CKB
GET4
SIX3
PLPP2
PIK3C2B
DTX1
C11orf86
ST7
PRDM12
TEX9
RFX7
USP25
PNMA8B
NDRG2
DPH3P1
ARHGEF40
PARD6B
MCTP1
CLIP3
CD164
FKBP1A
SLC22A23
C2CD4D
HOXA4
OR1F1
NR6A1
NUMB
CREBZF
PROZ
PCK2
RICTOR
UTP18
MBTD1
LRP6
CEP170B
MARCHF10
LOC102723623
KCNV1
GOLGA6L22
GOLGA6L1
SRRM5
RUFY4
KAT6B
PAFAH1B1
FNDC11
FAM72D
FAM72C
ACER3
PHF19
KAZALD1
HDGF
CSNK1G1
ART4
COBL
NYNRIN
ZFHX2
THTPA
NEGR1
MGAT1
IRF2BPL