ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1916933 | Epidermal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◣ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

MTRNR2L2
MSH3
DHFR
FOXJ3
MTRNR2L8
POLR3E
BRAF
NCOA7
H4C8
UBE3C
ATXN2L
ZNF839
SACM1L
PSMA3
TIA1
MVK
PGK1
SLC35E2A
PMF1-BGLAP
PMF1
SHF
PPP6R3
PRMT5
METTL26
MCRIP2
EEF1A1
PDE4A
BCAR3
NPAS4
BRMS1
B4GAT1
MTRNR2L9
SLC35E2B
LTA4H
HSPA6
POLG
PSMB3
PCGF2
TRIM7
FRG2C
APOA1
GSTA4
KNL1
VPS37B
GH1
MTRNR2L1
LUC7L2
FMC1-LUC7L2
FMC1
HES7
ALOXE3
CREBBP
FAM71E1
EMC10
COL23A1
GBA
MUC3A
HECA
RBM23
ING3
RGPD2
RGPD1
PLXDC1
NDUFS7
ILF2
C8orf37
RABEP1
RNASE4
ANG
FRG2
WDR74
RFX1
TXNL4A
LRRC6
BORCS6
SS18
RANBP2
DPP9
LOC105378979
CCDC107
PAK1
RNASEH2A
PRDX2
TRIM41
RAB11A
HOMER1
FAM187A
EFTUD2
CCDC103
ATP1B3
UGT1A3
ZBTB21
HES4
DCT
CCDC115
HMGN4
DYNC1LI2
NOCT
JOSD2
ASPDH
EIF4A3
JARID2
GNB1
HSPE1-MOB4
HSPE1
HSPD1
DPH6
YTHDC1
TMEM259
CNN2
UNC45B
ANKLE2
RPS29
SMURF1
CDC42
CCDC200
UBB
DLG2
PAXBP1
RALGAPA1
ELL2
HINT3
RPL9
LIAS
AP2A2
USP36
LYNX1-SLURP2
LYNX1
POLR3F
DZANK1
SMARCC2
ARIH1
GOSR2
IPO13
TAOK3
FAM234B
SUDS3
PPIL4
ZNF547
TRAPPC2B
WDR45B
TNFRSF6B
FBXO31
BCL6
SSU72
CLCN3
CD164
DUX4
CENPE
CDH11
RTF2
COMTD1
PPP1R21
RRNAD1
ISG20L2
MRFAP1
COX19
CDC14B
SNX16
CWC25
ATP9B
TPBG
JOSD1
GTPBP1
SMC2
ADARB1
LOXL3
DOK1
HADHB
HADHA
DOT1L
WBP4
ELF1
MAPKAPK5
BZW2
ANKMY2
UFSP2
C4orf47
ILRUN
GARS1
AGAP2
RBKS
BABAM2
TSPAN31
LOC101928764
SYPL1
UBE2B
CDKL3
GUF1
ZNF891
ZNF10
ORC5
OXSR1
TRIM33
TLE1
TRAF4
ZNF219
TMEM253
IQCH
AAGAB
PRMT9
THRAP3
COQ7
EIF4ENIF1
INSM2
TRIM48
DLST
PDXDC1
STAM2
ATP8A1
ACTR10
CTDP1
RHBDD3
EWSR1
TEAD1
EPHB2
UROS
BCCIP
SRI
ZNF576
IRGQ
PSIP1
OR1F1
ZNF300
MLLT10
NDC80
METTL4
TPT1
FLNA
STK19
DXO
EMD
RPL21
NOP56
H3C8
H2BC10
PSMD1
CHD2
SLC7A2
APTX
COMMD1
CCT4
TLE3
LYRM4
FARS2
CACTIN
DCTN1
MTRNR2L10
OPA3
PRKCI
POLR2M
CAPRIN1
DENR
RHBDD1
PAXIP1
FIGNL1
HROB
GIT2
ANKRD13A
IQSEC3
C21orf91
OR6B2
NDUFA10
USP15
VPS37A
CNOT7
RPL14
KISS1R
ARID3A
SETD5
AHCYL1
VARS1
PRDM10
PKNOX1
ESYT2
IQCE
RPUSD1
CHTF18
STK35
SELENOW
LIMA1
FRAT2
GALR1
REXO1
PARK7
KDM3B
NGB
NUP205
LASP1
MYO9B
HAUS8
MBD3
TRAPPC3
MAP7D1
TMEM250
DGAT2
NDST2
ZNF593
C1orf232
STK17A
FBXO34
POR
FKBP3
FANCM
PSMG2
CEP76
FAM168B
PPP1R13L
POLR1G
CCDC138
ICE1
TIGD5
EEF1D
UBE2H
PAK1IP1
MIS18BP1
FDXACB1
C6orf52
C11orf1
FKBP1A
TCP11L2
YTHDC2
C9orf72
SPOP
UPF2
POLR1H
ZNF571
ZNF540
IMPDH2
NSUN4
PHRF1
OGDH
RS1
PPEF1
HNRNPU
PDAP1
BUD31
RTKN2
NUDT18
METTL25
CCDC59
PPP5D1
CALM3
MAP2
RAB6A
NUDT15
MIA2
NOL8
CENPP
PPP3R1
CDON
ASAH1
KANSL1
PTDSS1
MTERF3
FLCN
CENPN
TIMM22
KCNAB2
CCNL1
ALDH4A1
NUP58
ATG16L1
STX6
ARID1B
GOLM2
PEF1
CEP78
BRPF1
NUP85
CSNK1G2
ZFAND2B
TMEM242
HGC6.3
EOLA1
BCAS2
EOLA2
SLC35B1
C5orf15
SPATC1L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IBA57
ATG16L2
NDUFB1
CPSF2
PFDN4
FRAT1
HSP90AA1
UBE2I
TMEM260
RTRAF
NUF2
COX18
UBE4A
CCDC71L
ARHGAP22
XPNPEP3
ST13
LSR
MED23
SIK1B
SIK1
ATP5MC2
EIF1
B4GALT7
VDAC2
RAPGEF1
NOTUM
MOB4
C15orf48
STK38L
KPTN
ING4
ALKBH3
OXR1
R3HDM2
INHBC
COPS7B
DHX15
STAM
RAB11B
RAD51AP2
PACRGL
CRH
KRT6B
U2AF1L5
U2AF1
FAM53C
CDC25C
USP1
FEM1A
LEKR1
RBM17
OPRL1
LKAAEAR1
KMT2A
PPIB
SNX12
PSMA7
TEX9
RFX7
CNOT6
GNB2
C19orf48
MUC1
USP37
CNOT9
ENOSF1
CPLX2
MAP1LC3A
KCNMA1
PIK3R3
DOHH
HDAC2
ENTPD2
NPDC1
C12orf66
CDC73
SMIM8
POT1
GPAM
DHX36
ALG10B
SYNCRIP
UNK
HSD3B7
TRIM39-RPP21
TRIM39
TSN
URB2
TAF5L
UCHL3
HYAL2
COMMD6
SH3GL1
CHAF1A
SPAST
ANKEF1
ELOVL5
RAB10
FAM227A
CBY1
IFT52
TRIP4
TMA7
SPTY2D1
CCDC51
ARL8B
ABHD6
RAB37
FOSB
TST
SKP1
MPST
CCDC83
GGNBP2
PNO1
MIA3
TADA3
ARPC4-TTLL3
ARPC4
AARSD1
USPL1
HMGB1
RABL2A
MTF2
IDH3B
NRBF2
NVL
CBWD5
CBWD3
GMPPB
AMIGO3
ZNF628
VTI1B
ERCC1
FUS
UBE2Q1
ZSWIM7
TTC19
DUT
SETD1A
NUDT4B
NUDT4
VIM
CBWD6
TAF9
SUPT7L
SLC4A1AP
RAD17
ARAF
AK6
MNAT1
TMED1
MRPS24
FAM160A2
CNGA4
CREB1
XRCC6
DESI1
TBCK
AIMP1
NBEAL1
ST7L
MRPS5
CAPZA1
RNF139
PROSER1
NHLRC3
NEMF
RNF126
RNF166
CTU2
CYCS
C8orf33
LYSMD3
SLC25A26
TES
KRTAP9-2
C10orf95
TMEM222
SUSD6
CCDC88A
OGA
ZBTB2
ZC3H11A
ZBED6
WASF1
CDC40
KRT6C
CD24
UIMC1
MED4
LPAR6
EIF3F
HPS5
GTF2H1
FGGY
BRD4
RPN2
OAZ3
MROH8
PNPLA8
TSFM
RTTN
NDUFC2-KCTD14
NDUFC2
EED
PRMT1
LRIG2
MAML2
LRP2BP
ANKRD37
RNF215
MAPRE1
KIAA1586
MYL12B
FOS
OMA1
DAB1
FAM200A
TTC30B
PEX3
MTREX
DHX29
ADAT2
RAD23A
RPL22L1
ARHGEF7
ASH1L
FOXC2
RNASEK
C17orf49
TMEM161B
TRIP10
PLEKHM3
GPR108
FAM24A
CDCA7L
RBM42
TTLL7
CREM
MKRN2OS
MKRN2
ITPRIP
EIF2D
HAP1
TNFAIP3
RUVBL1
RBM48
PEX1
EEFSEC
CCDC6
YY1AP1
DAP3
GALNT10
CCDC90B
BCAP29
ZNF76
SFSWAP
SCRT1
LYRM1
DCUN1D3
H2BC11
H2AC11
CTCF
AIG1
PIP4K2B
ATG101
MET
ERMARD
COMMD9
PIGF
CRIPT
RPP14
LRPPRC
LMAN1
HTD2
MRPS28
MAP3K2
LANCL2
AFF1
BTBD9
DDX5
CEP95
TLE4
MTFP1
VEZF1
PUM2
PHTF1
MYBPC3
ZFAND5
PERP
RICTOR
CD55
TEX14
PPM1L
RAD51C
ZFAND3
UNC79
BTBD7
FBRS
STX16
NOTCH2
VTA1
NMBR
LRIF1
BZW1
RAN
ICE2
RNF19A
ZNF335
TMEM41A
C1D
ZNF35
C1QTNF12
CBR4
USP2
KRT6A
ARRDC3
PLK2
ARID2
ZFAT
MAMDC2
CPNE7
ADCK5
BRD3OS
WFIKKN1
MVD
IFITM10
SSBP2
UNKL
PYDC1
VCX
PFKP
SLC25A41
KHSRP
MUC17
CNOT3
SLC19A1
ZHX3
GLIPR1L2
ZBTB37
LRTM1
OSGIN1
BAIAP2L1
SPAAR
GFI1B
HEXIM1
CRHR2
BTBD2
CCDC57
ANO7
RAD23B
GCNT3
ELSPBP1
BSPH1
PHACTR3
YJEFN3
CILP2
CXXC5
TP73
PBX2
GPSM3
TTC16
PTRH1
SBNO1
STXBP1
MAFK
RGS9
HDDC2
CUL3
PBX1
SPI1
C11orf95
ULK1
TMEM86B
SP4
TRAPPC9
FST
PRR29
COLEC10
ETS2
ABR
PXDN
CAPN12
IFI27L2
IQUB
C4orf19
VGLL4
USF3
CIB3
VCX2
USP22
SPRING1
RNFT2
NAPRT
MROH6
UBE2L5
PRELP
ZCWPW1
MEPCE
CMKLR1
KASH5
CACNG4
ESRP1
GOLPH3
SCYL3
KCTD9
CDCA2
COTL1
JRK
FZD8
MRPL58
SETDB1
CLDN34
AHRR
SMARCD3
CALY
H3-3B
CDK18
FIBCD1
TOR4A
SLC29A4
LARP1
LPCAT4
CACNG6
LY6E
TRIB1
KLK4
SYNGAP1
MRC2
CUTA
THSD4
LOC101928841
CORO2A
MAP1B
OR10H1
CLN3
APOBR
NPRL3
EFNA2
ATXN7
KDELR1
GRIN2D
ZNF512B
MYADML2
KLK14
AK1
VCX3B
IL17RE
ARF3
MTRF1
FAM240C
SMG7
VLDLR
SIGIRR
MSRB2
C10orf67
SUZ12
SPIRE2
PHLDB3
TNNI3
INTS1
C17orf58
DSTN
BFSP1
SPEF1
CENPB
CDC25B
PI16
P2RX1
PRR12
EYS
TTYH3
PELI3
USP34
MFNG
TLCD1
NEK8
SLC8A2
PHF21A
AGXT
FGF12
BIRC7
MTMR4
LRRN3
ADAP1
TMEM65
VCX3A
PRTG
BDKRB1
ARFGEF2
MZF1
MINAR1
UCKL1
KNDC1
CATSPERG
RASSF2
LCN12
FRMD6
ZNF524
FIZ1
SLURP2
OTOF
SP3
SNAPC4
CBLC
USP38
BCAS3
DNAJB8
JPH4
CMBL
RASA4B
INTS9
HMBOX1
TUBA1C
C17orf64
SLC43A2
APOH
NOS3
TLK1
SLC6A18
SP1
RNF43
DRC7
TSC2
NTHL1
USP32
HECW2
KCTD13
POLK
CERT1
SPACA6
MSI2
ARL6IP4
MEAK7
FOXJ2
CABP2
MLXIPL
LARGE1
APPBP2
ACTR3
CLTC
ALKAL2
TFEB
MECOM
PCNX1
DACT3
SP2
RASA4
NAV1
CADM4
CAP2
ECH1
CCDC8
CACNA1S
ASCL5
RSF1
AAMDC
FOXA2
C16orf72
ITPR1
MYADM
MAML3
RECQL4
NIM1K
MFSD3
LRRC14
BCAM
URGCP-MRPS24
URGCP
NAP1L5
RPH3A
EFCAB2
CDC42EP5
CTCFL
PALLD
CST3
KCNQ2
SIPA1L2
ZNF148
TMEM18
LCN6
AMMECR1
HS3ST2
ZFP41
GOLGA6L10
PITPNM3
PUDP
AP1S3
GPR78
OCLN
FBXL19
TMEM40
RAMP3
MMP15
LHFPL2
KCNC3
IGLON5
GREB1
DDI2
MED6
SATB2
NPEPPS
PHF23
GABARAP
DVL2
CA4
RCAN3
FOXK1
ESRRG
SLC13A3
TMEM63C
PCBP2
CDH22
ITIH5
ADNP