ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1916933 | Epidermal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◣ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

MTRNR2L2
MSH3
DHFR
FOXJ3
MTRNR2L8
POLR3E
BRAF
NCOA7
KIF5C
H4C8
DUX4
UBE3C
ATXN2L
ZNF839
SACM1L
PSMA3
TIA1
PCYOX1
MVK
MPZL1
PGK1
SLC35E2A
OR2B2
H2BC17
H2AC17
PMF1-BGLAP
PMF1
SHF
PPP6R3
PRMT5
WFIKKN1
METTL26
MCRIP2
EEF1A1
PDE4A
BCAR3
NPAS4
BRMS1
B4GAT1
HSPA6
SNAPC1
MTRNR2L9
SLC35E2B
LTA4H
POLG
PSMB3
PCGF2
TRIM7
FRG2C
APOC3
APOA1
GSTA4
KNL1
VPS37B
GH1
CSHL1
MTRNR2L1
LUC7L2
FMC1-LUC7L2
FMC1
HES7
ALOXE3
CREBBP
FAM71E1
EMC10
COL23A1
GBA
MUC3A
HECA
RBM23
ING3
RGPD2
RGPD1
FAM236B
FAM236A
PLXDC1
NDUFS7
NPR1
ILF2
OR1F1
C8orf37
RABEP1
RNASE4
ANG
FRG2
MAMDC2
LOC102724770
DGCR6
APOC1
WDR74
STX5
RFX1
ZBED9
TXNL4A
LRRC6
BORCS6
SS18
RANBP2
DPP9
LOC105378979
NEMF
SIT1
CCDC107
ARHGEF39
PAK1
RNASEH2A
PRDX2
TRIM41
RAB11A
HOMER1
FAM187A
EFTUD2
CCDC103
PHRF1
ATP1B3
HMGN4
FCGR3A
UGT1A4
UGT1A3
ZBTB21
HES4
DCT
IMP4
CCDC115
DYNC1LI2
NOCT
JOSD2
ASPDH
EIF4A3
JARID2
GNB1
EAPP
HSPE1-MOB4
HSPE1
HSPD1
DPH6
YTHDC1
ARL4D
TMEM259
CNN2
UNC45B
NLE1
ANKLE2
RPS29
DRD4
SMURF1
CDC42
CCDC200
UBB
DLG2
PAXBP1
RALGAPA1
ELL2
HINT3
RPL9
LIAS
AP2A2
USP36
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
PTPRN2
POLR3F
DZANK1
SMARCC2
ARIH1
IPO13
GOSR2
TAOK3
FAM234B
SUDS3
PPIL4
ZNF547
TRAPPC2B
WDR45B
TNFRSF6B
MAP1LC3B
FBXO31
BCL6
SSU72
NEK1
CLCN3
CD164
ZNF184
CENPE
CDH11
RTF2
COMTD1
PPP1R21
RRNAD1
ISG20L2
CYP2W1
MRFAP1
COX19
CDC14B
SNX16
CWC25
ATP9B
TPBG
JOSD1
GTPBP1
SMC2
ADARB1
LOXL3
DOK1
HADHB
HADHA
DOT1L
NOC4L
DDX51
WBP4
ELF1
FCGR3B
MAPKAPK5
UBC
BZW2
ANKMY2
UFSP2
C4orf47
ILRUN
TSPAN31
CDK4
GARS1
AGAP2
RBKS
BABAM2
LOC101928764
SYPL1
UBE2B
CDKL3
GUF1
ZNF891
ZNF10
ORC5
OXSR1
TRIM33
TLE1
TRAF4
ZNF219
TMEM253
IQCH
AAGAB
PRMT9
THRAP3
COQ7
SFI1
EIF4ENIF1
GTF3C5
INSM2
TRIM48
ZNF229
DLST
PDXDC1
ACTR10
STAM2
ATP8A1
CTDP1
ZNF285
RHBDD3
EWSR1
TEAD1
EPHB2
UROS
BCCIP
SRI
ZNF576
IRGQ
PSIP1
ZNF300
SKIDA1
MLLT10
NDC80
METTL4
TPT1
STK19
DXO
TMEM242
LOC110384692
C4B
C4B_2
C4A
EMD
FLNA
RPL21
NOP56
PLA2G4E
H3C8
H2BC10
MDM4
PSMD1
CHD2
SLC7A2
APTX
COMMD1
CCT4
TLE3
LYRM4
FARS2
CACTIN
CFAP45
DCTN1
MTRNR2L10
OPA3
PRKCI
POLR2M
CAPRIN1
DENR
RHBDD1
PAXIP1
FIGNL1
HROB
GIT2
ANKRD13A
BTNL9
IQSEC3
C21orf91
OR6B2
NDUFA10
USP15
VPS37A
CNOT7
RPL14
R3HDM4
KISS1R
ARID3A
SETD5
AHCYL1
VARS1
PRDM10
DYNC2I1
PKNOX1
ESYT2
IQCE
KIFC2
CYHR1
RPUSD1
CHTF18
STK35
SELENOW
LIMA1
FRAT2
GALR1
REXO1
PARK7
KDM3B
NGB
NUP205
ART1
LASP1
MYO9B
HAUS8
MBD3
TRAPPC3
MAP7D1
POM121L2
TMEM250
DGAT2
NDST2
ZNF593
CNKSR1
C1orf232
NOTCH2NLC
NOTCH2
STK17A
POR
FKBP3
FANCM
FBXO34
PSMG2
CEP76
FAM168B
PPP1R13L
POLR1G
CCDC138
ICE1
TIGD5
EEF1D
UBE2H
PAK1IP1
MIS18BP1
FDXACB1
C6orf52
C11orf1
ALG9
FKBP1A
TCP11L2
YTHDC2
C9orf72
SPOP
UPF2
PPP1R11
POLR1H
ZNF571
ZNF540
NDUFAF3
IMPDH2
DALRD3
OGDH
NSUN4
RS1
PPEF1
HNRNPU
PDAP1
BUD31
RTKN2
NUDT18
METTL25
CCDC59
PPP5D1
CALM3
MAP2
RAB6A
NUDT15
MIA2
NOTCH2NLB
NOTCH2NLA
NOL8
CENPP
PPP3R1
CDON
PGP
BRICD5
CASKIN1
ASAH1
TIMM22
KANSL1
PTDSS1
MTERF3
FLCN
CMC2
CENPN
KCNAB2
CCNL1
ALDH4A1
NUP58
ATG16L1
STX6
ARID1B
GOLM2
PEF1
CEP78
BRPF1
NUP85
CSNK1G2
ZFAND2B
HGC6.3
EOLA2
EOLA1
BCAS2
HSFX4
SLC35B1
C5orf15
SPATC1L
IBA57
MAPK11
ATG16L2
NDUFB1
CPSF2
PFDN4
FRAT1
HSP90AA1
UBE2I
TMEM260
RTRAF
NUF2
COX18
UBE4A
CCDC71L
ARHGAP22
XPNPEP3
ST13
DNAJB7
LSR
MED23
SIK1B
SIK1
EIF1
ATP5MC2
TMED9
B4GALT7
MYO1G
VDAC2
NOTUM
RAPGEF1
MOB4
C15orf48
STK38L
PURA
KPTN
ZNF23
ING4
ALKBH3
OXR1
R3HDM2
INHBC
SMTN
PDE6D
COPS7B
DHX15
STAM
RAB11B
RAD51AP2
PACRGL
CRH
KRT6B
U2AF1L5
U2AF1
FAM53C
CDC25C
USP1
FEM1A
LEKR1
RBM17
RGS19
OPRL1
LKAAEAR1
KMT2A
PPIB
PSMA7
SNX12
TEX9
RFX7
GNB2
C19orf48
CNOT6
MUC1
USP37
CNOT9
ENOSF1
CPLX2
MRPL23
MAP1LC3A
KCNMA1
PIK3R3
DOHH
FZR1
HDAC2
RPEL1
NPDC1
ENTPD2
C12orf66
CDC73
SMIM8
POT1
GPAM
GJB7
DHX36
ALG10B
UNK
H3-3B
SYNCRIP
HSD3B7
TRIM39-RPP21
TRIM39
TSN
URB2
TAF5L
HYAL1
UCHL3
TUSC2
HYAL2
COMMD6
JAG2
SH3GL1
CHAF1A
SPAST
ANKEF1
ELOVL5
RAB10
FAM227A
CBY1
IFT52
ARL8B
PLXNB1
SPTY2D1
TRIP4
TMA7
PCLAF
CCDC51
ABHD6
RAB37
FOSB
TST
SKP1
MPST
CCDC83
MYO19
GGNBP2
AARSD1
PNO1
MIA3
TADA3
ARPC4-TTLL3
ARPC4
USPL1
HMGB1
RABL2A
MTF2
IDH3B
NRBF2
NVL
CBWD5
CBWD3
GMPPB
AMIGO3
ZNF628
NAT14
VTI1B
ERCC1
CHRNB2
MMP8
FUS
UBE2Q1
ZSWIM7
TTC19
DUT
SETD1A
ORAI3
NUDT4B
NUDT4
VIM
SUPT7L
SLC4A1AP
CBWD6
TAF9
RAD17
ARAF
AK6
MNAT1
TMED1
MRPS24
FAM160A2
CNGA4
CREB1
ATF3
XRCC6
DESI1
ANKRD63
MRPS5
TBCK
AIMP1
NBEAL1
ST7L
CAPZA1
RNF139
PROSER1
NHLRC3
RNF166
CTU2
RNF126
CYCS
C8orf33
SCNN1D
LYSMD3
SLC25A26
TES
KRTAP9-9
KRTAP9-3
KRTAP9-2
GYS2
C10orf95
SUSD6
TMEM222
CCDC88A
OGA
ZBTB2
ZC3H11A
ZBED6
WASF1
CDC40
KRT6C
SART1
CD24
UIMC1
MED4
LPAR6
EIF3F
HPS5
GTF2H1
FGGY
BRD4
RPN2
OAZ3
MROH8
TSFM
PNPLA8
RTTN
NDUFC2-KCTD14
NDUFC2
CFAP100
EED
PRMT1
LRIG2
MAML2
LRP2BP
ANKRD37
B4GALNT3
SEC14L2
RNF215
MAPRE1
KIAA1586
MYL12B
MYL12A
FOS
OMA1
DAB1
ZNF655
FAM200A
TTC30B
PEX3
MTREX
DHX29
ADAT2
RAD23A
CALR
RPL22L1
ARHGEF7
ADGRA1
MTHFSD
FOXC2
ASH1L
RNASEK
C17orf49
TMEM161B
TRIP10
PLEKHM3
GPR108
FAM24A
CDCA7L
DBN1
PRR7
RBM42
TTLL7
CREM
MKRN2OS
MKRN2
EIF2D
ITPRIP
IL1A
HAP1
TNFAIP3
RUVBL1
RBM48
PEX1
EEFSEC
CCDC6
YY1AP1
DAP3
GALNT10
CCDC90B
BCAP29
ZNF76
SFSWAP
SCRT1
DGAT1
LYRM1
DCUN1D3
H2BC11
H2AC11
CTCF
H4C9
AIG1
PIP4K2B
SMIM41
ATG101
PRR5L
MET
STAT1
ERMARD
COMMD9
PIGF
CRIPT
RPP14
LRPPRC
LMAN1
HTD2
MRPS28
MAP3K2
LANCL2
AFF1
BTBD9
POLG2
DDX5
CEP95
MTFP1
TLE4
VEZF1
PUM2
KRT74
PHTF1
MYBPC3
ZFAND5
PERP
RICTOR
CD55
TEX14
RAD51C
PPM1L
ZFAND3
UNC79
BTBD7
PRR14
FBRS
STX16
VTA1
NMBR
LRIF1
BZW1
RAN
ICE2
RNF19A
ZNF335
TMEM41A
C1D
KIF12
ZNF35
C1QTNF12
CBR4
USP2
KRT6A
ARRDC3
PLK2
ARID2
ZFAT
TNFSF13B
GET4
RPL13
CPNE7
CHD8
ADCK5
RNF223
BRD3OS
TSEN34
TMC4
MBOAT7
OLFM1
MVD
PAM16
PDX1
IFITM10
CTSD
SSBP2
UNKL
NELFB
TRIM72
PYDC1
RAB11FIP3
VCX
LAT2
PTGES2
PFKP
SLC25A41
KHSRP
PLA2G6
MUC17
WBP1L
B3GNTL1
CNOT3
SLC19A1
TEPSIN
NDUFAF8
ZHX3
GLIPR1L2
ZBTB37
LRTM1
ZNF541
DEGS2
OSGIN1
BAIAP2L1
PTP4A3
SPAAR
HRCT1
FER
SBNO2
TOLLIP
RER1
MORN1
GRTP1
GFI1B
BCL2L10
DENND1B
NCALD
HEXIM1
CRHR2
BTBD2
CCDC57
ANO7
RAD23B
GCNT3
OR4K14
MAS1
ELSPBP1
BSPH1
PHACTR3
KLHDC10
YJEFN3
CILP2
CXXC5
MKNK2
TP73
PBX2
GPSM3
AGER
TTC16
PTRH1
SBNO1
STXBP1
LITAF
MAFK
KRBA1
RGS9
HDDC2
CREB3L3
CEBPB
CUL3
PBX1
SPI1
ZBTB32
C11orf95
OR10R2
OR10K1
MBL2
RPL35A
IQCG
KANK1
ULK1
TMEM86B
SP4
TRAPPC9
FST
HRH3
PRR29
COLEC10
C1QTNF7
ETS2
ABR
PXDN
TECR
SSH1
DNAJB1
CAPN12
IFI27L2
DICER1
DEFB129
IQUB
C4orf19
ZFPM1
VGLL4
USF3
SLC36A2
CIB3
VCX2
USP22
SPRING1
RNFT2
NAPRT
MROH6
UBE2L5
PRELP
WEE2
ZCWPW1
PPP1R35
MEPCE
CMKLR1
MB
LOC102723971
KASH5
CACNG4
ESRP1
LRRC15
FAM89A
B4GALNT4
GOLPH3
SMARCD2
SCYL3
KCTD9
CDCA2
RFC5
COTL1
JRK
FZD8
MRPL58
SETDB1
PTPN9
TMEM220
CLDN34
KRTAP5-6
FAAH
SHISA9
AHRR
TIMM44
SMARCD3
CALY
TTYH1
CDK18
ACSF3
HELZ2
FNDC11
SECTM1