ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130090 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◣ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◢ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◢ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

WDR74
RAD51AP2
POU5F1
CD99L2
ROR1
TARBP2
MAP3K12
TNC
TCF7L1
CDH11
CLDN9
PRICKLE1
CALM2
H4C12
SHISA5
FBXW11
ZNF532
NXF1
GOLGA6B
POLDIP3
KIAA0930
DPYSL2
MAD2L2
ABHD11
IGSF8
H4C11
IFIT3
NAV2
TDGF1
ZNF664-RFLNA
ZNF664
CCDC92
MTF2
ANO1
SET
GOLGA6D
MAMDC2
H4C14
H4C15
AKIRIN1
SLC7A5
PMEPA1
RPH3A
FUS
IGFBP3
GOLGA6A
ZC3H10
RPL41
NES
ADARB1
TRA2B
ID1
ZSWIM7
TTC19
H4C3
H1-6
ZNFX1
PHF23
DVL2
GADD45B
PF4
PPBP
DLG2
MTA3
GLB1L3
DNMBP
LARP1
SYPL1
MYL6B
PNP
FOXD1
CALM1
RAB15
TMEM132B
HEY2
DDIT4
FBXO40
INTS6
GPR89B
H3C15
H3C14
H2AC19
H2AC18
RPS8
H2BC4
H2AC6
LRIG1
DCLK1
EIF4G2
ALDOC
H4C9
SKA3
MRPL57
GOLGA6C
UNC5D
H1-2
MAP2K7
U2SURP
TGIF1
TM9SF4
H3-3B
H2BC5
H1-4
AMOTL2
RAB43
TFPI
RPLP1
LYNX1-SLURP2
LYNX1
SNCG
MMRN2
NCOR2
SRSF7
STK17A
TNPO3
VAMP1
FAM20C
WDR75
TSEN2
LZTS1
H2BC12
H2AC12
UBB
SRCIN1
PLAG1
CHCHD7
TMSB4X
FAM120B
LINGO1
DLL1
PYGM
STX10
IER2
TBL1X
SEMA6A
CCDC138
SEPHS1
KLHDC7A
SRSF3
PLAGL1
STOX2
NANOG
MUC1
WFDC1
PRDX1
POLR3G
MBLAC2
RPS13
YTHDC1
EPHA7
LRRC3
KRBA2
TMEM107
PDPN
COX18
ESPNL
CBWD5
CBWD3
CBWD6
SPRR2F
POLR3D
CDH10
MTRNR2L8
ZFHX3
EPHB1
TUBD1
RPS6KB1
PIPOX
OR5AR1
H1-7
HSPA1B
ZCCHC9
MTHFD1
CTSF
OPCML
PMPCA
ENTR1
H3C10
TUBGCP5
H2BC13
H2AC13
KMT2D
NBPF1
AGO1
H2BC11
H2AC11
LTA4H
FGF1
TSPAN5
TMEM242
PLEKHB2
RPL37
FRAT2
MAZ
MRPL53
KANSL2
CBWD1
JADE1
HSPB1
PAPLN
TUFT1
FAM126A
TMEM30A
GAS6
FGFR2
TOB2
RAF1
PRRG2
NOSIP
SLC3A2
NKIRAS1
RPL15
HM13
AHDC1
STAT3
PPP1R37
TIMM13
LTBR
SEC22B
ZNF419
SCNN1A
CDH9
MTCL1
H3C6
RND1
PBLD
HNRNPH3
LAMP5
MUSK
EFHC1
ERLIN2
RBMX
NEK1
SAP18
COPS4
TMEM39A
VPS29
RAD9B
FOXP1
H4C5
GDPD2
STRAP
ALDOA
RPL37A
KDM6B
NAE1
KIFBP
NEUROG3
EEF1A1
GBA
GCNT2
HEXIM1
GINS4
C8orf58
SNX8
GPN2
ATP5MC2
B3GALT5
IGF2BP3
STRA6
SLC25A3
RTL8C
H4-16
H2AJ
KIF27
KRTAP4-12
SPATC1L
WDR4
SH3D21
DCUN1D5
CCAR2
MSH2
PPIH
ABI1
SEC22C
SFR1
KBTBD3
AASDHPPT
NKTR
VIRMA
ZNF286A
TFAP2A
LDLR
ADAR
PNRC1
ZNHIT3
PTPN6
C12orf57
TPCN1
HMGCS1
PLEKHG3
CMKLR1
NAGK
FAM228B
SF3B6
DNAJC9
EEF1AKMT1
GADD45G
SLC5A5
MRGBP
TFF3
TMBIM6
NSRP1
DPY30
H2BC8
H2AC8
CCN2
VCPIP1
C8orf44-SGK3
POLG2
FOXO3B
NUFIP2
RRN3
NOLC1
RPS7
SLC2A11
ACER2
ZNF775
TPM1
SPRY4
HIP1
HMGCR
FGF19
NOP58
RPL10A
MED11
EOLA2
TIMMDC1
HASPIN
RAB5IF
DR1
JPT1
CSRNP2
FAM53C
CDC25C
DNAJC25-GNG10
DNAJC25
ZBTB4
SLC35G6
POLR2A
SLC9A1
MYLIP
MKNK2
FSCN1
BAIAP2
C12orf65
FAM43A
SDC4
UBE2S
PFKFB3
NOTCH2NLC
TTI2
RNF19B
PITRM1
KDM4A
UNK
INTS5
VASN
TRIM25
MICALL2
PLEC
SERPINE1
DGAT1
FBF1
PABPC1
TOB1
NOTCH2NLB
NOTCH2NLA
SOCS1
BTG1
POR
PLK2
DNAJB1
EIF4A3
AFF1
SIRT4
NCEH1
USP42
NFKBIZ
ANO10
HNRNPH1
ZDHHC4
MTRNR2L2
MSH3
DHFR
ARL15
LDHA
ABHD5
SPTAN1
MTHFD2
TFRC
SRSF6
PSAP
NOTCH2
IER3
C5orf24
SDCBP
EXT1
TBC1D22A
LRCH4
FBXO24
HEXB
ADCK5
SOCS3
CYCS
FLOT1
POLR2J3
RBM25
TGOLN2
MARCHF6
LUC7L
ZBTB45
HNRNPAB
TTPAL
POLG
SGF29
KIF5B
NEU1
PIK3R3
IER5
DYNLL2
BLOC1S2
DENR
SESN2
NARF
IFRD1
DESI2
RINT1
TAF4
UBE2D1
ORC5
C1QTNF6
R3HDM4
RARS1
SLC1A5
ERRFI1
RELT
H2AX
PABPC4
SKP1
SQSTM1
BSG
NANS
RPL3
ATF3
GNAI2
ZC3H12A
TATDN1
NDUFB9
FDXR
HNRNPA2B1
CBX3
DDX5
CEP95
ZFAND5
TAGLN2
TRIM28
SPPL2A
SLC16A3
SLC35G1
APTX
HBEGF
DNAJB4
NTMT1
DNM1L
MAT2A
RBM34
PHACTR4
MLXIP
SLC38A2
CITED2
P4HA1
HSP90AB1
PDLIM7
NUDCD1
PTDSS1
MTERF3
FTL
BRMS1L
MGAT1
DNAJA1
ARL6IP1
TUBA1C
ZNF248
SPRING1
RNFT2
HEATR5A
RNF14
CNNM4
ALG6
OAT
PHLDA2
KLHL12
IMPA1
UAP1
SMURF2
DRG1
ARL4D
NRL
PPIF
SRSF2
MFSD11
RPS9
CDKN1A
TNFAIP8
BBC3
TRAF4
ZBED8
RPL5
NBN
TMEM199
POLDIP2
SENP5
ERCC1
METRNL
ZCWPW1
MEPCE
USP45
NET1
NDRG1
DYNC1H1
TRIB1
TNPO1
SIL1
FARSA
CALR
ASCC1
ANAPC16
PCK2
LRPAP1
ID2
CSNK1G3
PPP1R3C
SLC30A5
RPLP0
INTS13
FGFR1OP2
BAMBI
STK38
TERF1
LOC100287896
LIPT2
AMACR
C2orf42
TNFRSF10D
S100A13
TUBB2A
STIP1
SPIDR
NASP
SMIM12
B2M
MRPS25
GTF2B
CSKMT
C11orf98
PPP1R12C
XKR9
LACTB2
IER5L
RHOB
PTPRA
PTPN2
SERINC5
SRP68
NRBF2
FAM133B
CEBPB
MIGA2
HIF1AN
IRF1
HLA-E
WIPI2
PARK7
GRB2
CCS
CCDC87
SRA1
PUS7
RNF135
FAM83D
OAZ1
GOLPH3
SUPT4H1
FAM149B1
ECD
CYP20A1
RELL2
IMPDH2
XPO5
POLH
DNAJB2
NCOA5
EEF2
SGK1
EFR3A
ZNF143
YWHAG
TMSB10
ZFAND2A
RAB11A
CRISPLD2
PRMT9
MYH9
TSTD3
RNF34
RPAP2
GLMN
TECR
RPL12
LRSAM1
THBS1
CAVIN1
KAT6A
DGKH
DYNLL1
RMDN1
EHD1
PPFIA1
DBNL
GPR89A
SLC26A2
KDM4B
PRPF4
CDC26
IQCD
E4F1
RIOX1
UGP2
SWI5
GOLGA2
PARP2
LRIG2
TBC1D31
RIPK2
AHR
NFKBIA
MED17
NCOA3
CTNNB1
HDAC3
ZBTB37
SERTAD1
PTPN1
WASHC4
STAT1
BTBD10
FER
ADRB2
PPP1R15A
UBA2
TNFAIP2
TEKT2
ADPRS
TAF13
TMX1
SLC2A3
RBM6
TMEM79
SMG5
KISS1R
GLS
DUSP1
ZNF148
C19orf48
FOS
RBM14-RBM4
RBM14
DENND6A
DPY19L4
SELENOT
PIEZO1
GOSR2
BZW2
ANKMY2
RASA1
DNTTIP2
MAPK8
TUBB4B
TEP1
C15orf39
ZMAT3
YLPM1
SLC8B1
TAF12
SCFD1
ATP5F1B
TMEM151B
NFKBIE
CPEB4
RPS3
LIMA1
NUDT15
TRIP11
TM9SF3
ACER3
PSMD14
SRSF5
FLNA
RGS3
KCTD7
ACAP2
HSPA5
ICE1
CIRBP
ALAS1
MFAP3
FAM114A2
CCDC80
ADSL
PMAIP1
GALR2
TMEM170A
ATP6V0C
THOC3
TMEM249
SLC52A2
FBXW2
FBXL6
NPM1
COTL1
SLC20A1
AFG3L2
SEPHS2
IPP
JUNB
CCNL1
RPL13A
RETSAT
ELMOD3
DIMT1
FAM220A
S100A1
SPECC1L
TPI1
HMBS
EI24
CUL7
SAT1
VCL
MATR3
ZCCHC24
GTF2A1
SMN2
SMN1
EIF3A
GTF2H2
FAM234A
NIPBL
DELE1
MTRNR2L1
TECPR2
CINP
ZNF326
CZIB
RIDA
POP1
HRH1
SLC35C2
AKAP1
CRLS1
RUNX1
MTMR2
CCNG1
GTF2H5
DSCC1
EIF4A2
BCAR1
NCL
DNMT1
ABTB2
RAB2A
BORCS5
TKT
GSTP1
FGFR1
PDZD8
MGRN1
HERPUD1
CLIC4
ZNF622
WDR47
C7orf26
SLFN5
ASH1L
TUBA1B
TMEM138
MSANTD2
CYB561A3
ING1
SLC16A1
KLHL7
ABTB1
TRA2A
TNIP2
HSP90AA1
LRRC37A3
CNBP
RNF141
SLTM
TAX1BP3
EMC6
POLR2D
PRPF39
MTRES1
KATNBL1
SAR1A
GSTK1
JUN
LZTR1
TNRC6B
ERN1
SLX1B
SLX1A
BOLA2B
BOLA2
PSMD8
SIKE1
ATG16L1
KPNA1
STK38L
SNF8
NSF
MCL1
EPHA2
ASPSCR1
RSAD1
ATOX1
PCTP
ARPC1A
RABIF
C6orf89
BICD2
PGAP2
MKRN2OS
XRN2
MT1X
MAEA
C6orf62
RBM12
CPNE1
SART3
ISCU
SSNA1
ANAPC2
NOL11
MAP3K3
KCNG1
RAB6A
ZNF800
LRCH3
MAPK1IP1L
SDHAF3
PLK3
GLUL
ENTPD5
BBOF1
PRKRA
PJVK
LIN7C
DCXR
DENND10
LATS1
RND3
GNAI3
APPBP2
TMED9
FAM13B
ACSL3
TSPAN10
KIF18B
TFAM
ZDHHC16
EXOSC1
EPHX1
RPL6
KLHL21
ATP6V1B2
TAF15
AARS2
KCTD13
PA2G4
BCAP29
CSRNP1
HES6
COPG1
ATP5F1E
DDX3X
MACROH2A1
WDR11
MRPL35
IMMT
THADA
MKRN2
CCDC61
ODC1
RFESD
DPH5
ZFAND1
SMOX
AHCYL1
SAV1
RBBP5
TSPAN17
OTULIN
EIF2AK1
HERC3
ZKSCAN2
CEP85
GFUS
PDIA3
FEM1C
ZNF546
NPLOC4
RGS2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
OGDH
C16orf72
TACC1
RAB22A
ZNF468
ZNF33B
SNAI1
POMZP3
SMAD7
RUFY1
TMEM71
PHF20L1
POLE4
ZSWIM1
PTMA
PRR13
MOCS2
C2orf69
TK1
AFMID
BOLA2-SMG1P6
ANXA2
BTBD1
C12orf29
SETD9
RSPH3
EFNB2
YKT6
OPN3
CHML
TBCCD1
DNAJB11
MAP2K2
DDIT3
MBD6
GK5
ASCC2
HARS2
HARS1
RPL22L1
GOLGB1
LRRC46
NUP133
RPS20
MIB2
CYTH2
GATD1
C1orf74
POLR2C
WDR70
NEK4
CBFA2T2
SLC38A10
PTPN11
RPS6KA4
SMARCB1
AMZ2
DNAL1
NOP56
BNIP3
GNL2
PYROXD2
SFT2D3
NFE2L1
EIF5
STXBP3
SCRIB
YAE1
RDH11
VEGFA
NABP1
GNAS
UBC
RPS27
RAB13
PNPLA2
CCZ1B
HNRNPLL
STK11IP
NLRX1
MTFMT
SMIM4