ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064482 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◢ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◣ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◢ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

PMEPA1
NODAL
PITX2
LEFTY2
POU5F1
ZNF664-RFLNA
ZNF664
CCDC92
SLC7A5
PMF1-BGLAP
PMF1
FGF8
NPM3
WDR74
LEFTY1
STOX2
MMP9
CAV1
SKIL
TCF7L1
RAD51AP2
DPPA4
MTRNR2L2
MSH3
DHFR
FAM20C
AGO1
SNX18
ROR1
CD99L2
RPRM
VOPP1
NEURL1B
NPFFR2
CHD1L
PRKAB2
DST
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CLDN9
TDGF1
ETS1
GLB1L3
DIDO1
CCDC200
PRICKLE1
PLAGL1
LRAT
EPHA1
MTRNR2L8
TEAD4
SHISA5
SLC46A1
MDN1
NTM
UNC45B
FAM178B
EPN1
WNT3
NBPF1
CER1
CHD2
FBXO40
MAST4
PIP4P2
RNF141
STMN1
RAB15
NDRG2
ARHGEF40
SLAMF1
TIMP4
SMIM3
MAD2L2
STK17A
GOLGA6C
USP53
L1TD1
CYB561
NAV2
CFAP410
ANO1
KCNN2
GOLGA6A
ITGB1
ZNF148
HES1
NUF2
USPL1
HMGB1
CALD1
PBLD
HNRNPH3
KSR1
POLR3G
MBLAC2
MTRNR2L1
GOLGA6B
BCKDHB
CTSC
ARID2
WT1
RARB
LYNX1-SLURP2
LYNX1
MTF2
ZSWIM4
HOXB13
MUC3A
KAT6A
LRRC37A3
KRAS
MRI1
LINGO1
LHX1
TBX22
GOLGA6D
HEY2
SALL2
MOB4
DCAF10
FRA10AC1
SEC22B
TCEAL8
JMJD1C
ASIC2
AVPR1B
PCBP1
DCLK1
CD101
SYPL1
NOTCH2
NFE2L3
PPA2
FOXN3
SRSF2
MFSD11
MAX
BAMBI
PLPP2
RAPH1
SLC6A15
PDPN
NOCT
EOMES
AKIRIN1
NFAT5
MNAT1
FGF2
CCNL1
NIPBL
CBWD5
SUPT6H
SDF2
EFEMP1
BCL11A
NTRK2
DNAJC10
RNF43
PPM1H
FAM120B
DLL1
CPNE8
FGF1
FGF19
WASHC4
CEP83
VPS13B
MSMO1
BUD13
LHPP
LRRC57
HAUS2
TEX46
KDM1A
LRP12
NEDD4L
KDM5B
GLRA3
KMT2E
DAB1
WFDC8
FEM1C
ZNF518A
DPPA5
PIK3R3
NES
TNPO1
ARIH1
POU2F3
ZNF286A
HSP90AB1
CORO2B
COPS8
TMEM106B
SET
TSPAN5
DUSP6
MARCHF7
NDUFC2-KCTD14
NDUFC2
MLLT11
CDC42SE1
CNOT3
NEUROG3
TPCN1
CCN2
RTN4
PPARGC1A
ID2
G3BP1
LYPLAL1
MMADHC
STRA6
CTNNB1
MTX2
USP37
CNOT9
MICU2
PDE1B
H4C12
DCP1A
WDFY1
SMAP1
PDE4DIP
PLEKHA5
SNRPN
HEXB
ZCCHC3
SHISA8
LIMS1
XPO5
POLH
ALDH7A1
ATP23
SCOC
BCAT1
DNAJC9
ANKRD46
RWDD1
LARP4
FAM186A
MRPL39
PTCH1
SLC1A1
NT5DC3
PICK1
KANSL3
FER1L5
VRK2
GMCL1
MRM3
GLOD4
SEPHS1
PCNA
PHF23
DVL2
RANBP3
FAM83F
RIMBP2
C1orf74
CCDC88A
IFNAR1
ZFHX3
TPM1
SPOP
ARAP3
IGSF8
CFAP161
C3orf52
FFAR4
MBNL3
LRRTM3
DNAJC25-GNG10
DNAJC25
NCOA5
METAP1
OPA1
SPRED1
WDR41
JADE1
SH3RF2
GOT2
GCNT2
ID1
NRL
PCK2
SMC5
ANO10
ABHD5
LRCH3
LRRC59
SKA3
MRPL57
FAM227B
DTWD1
HES5
PANK4
ACCS
NFIA
PDE1C
RRP1B
HSF2BP
TSEN2
NUP54
STX18
FRG2C
KCNT2
TULP4
SARAF
WDR48
SCN11A
TBC1D5
FCMR
MAP7
MARCHF3
WWC2
UBAP2L
C1orf43
DPYSL3
GLS
MYL12B
HTR5A
GADD45A
ASCC3
TXNL4A
DCP1B
NADSYN1
DHCR7
FRG2
ETV1
ZC3H6
NCK1
CYRIB
ADARB1
FAM149B1
ECD
DPY19L4
BLCAP
PIPOX
GDPD2
ARL5A
MRPL21
IGHMBP2
DPYSL2
SRA1
MTMR2
ABHD10
SCG3
PAH
SUPT20H
ALKBH3
STEAP1B
SNCG
MMRN2
CALM1
ZSWIM7
TTC19
SSBP2
ANKRD18B
STK26
MAD2L1
FDXACB1
C11orf1
GNL2
DR1
ARHGEF12
PGGT1B
EXOC2
SLC11A2
PMAIP1
CORO2A
PRUNE2
NFKBIZ
MAPK8
ABHD11
OCIAD2
KCNB1
MTHFD1L
TRPM3
RPL5
ITGAV
SREK1
PDE7A
RPS16
TBC1D32
FOXP1
PKDCC
LLGL2
MMAA
FOXJ3
SPRY2
APOBEC3C
APOBEC3D
MYLIP
RGS9
LRRC3
RAB23
SNRNP48
FBRS
LRRC8B
EFHD1
MARCHF6
CDC42EP3
TBRG4
TFAP2A
HECTD3
NPAT
ATM
UNC5D
NAP1L3
FAM133A
TRDMT1
TMEM14A
MRRF
BEX3
DNAJB2
SLTM
SNAPC5
FGF6
DLG2
UNC50
COA5
ETV3
CEP126
ANGPTL5
FILIP1L
HERC3
PYURF
PIGY
TRMT11
FKBP3
FANCM
SON
GART
MAML3
IL34
PARPBP
NUP37
KIAA1958
C9orf147
HMGA1
CCDC43
COL21A1
U2SURP
RMND1
ARMT1
MB21D2
RTKN2
GRID2
C5orf24
UGCG
CCDC30
ZMYND12
PPCS
STT3B
FIGN
FOXD1
GSK3B
ERBB2
PGAP3
HASPIN
LUC7L
SACM1L
OSGIN1
UNG
ALKBH2
ZNF250
ARHGEF5
HIVEP2
SMIM14
PSMG1
ZC3H15
DUS1L
AMOTL1
SDHAF3
BRIX1
BCAP29
CAPZB
RWDD3
CALM2
SDR39U1
ZFP91
LPXN
VSNL1
OSBPL1A
CIPC
LTF
ZDHHC22
EPCAM
MIXL1
SOD2
WTAP
CUL3
GTF2H2
ASRGL1
ATF3
CHD7
SRSF7
JPT1
CSRNP2
FAM53C
CDC25C
ZBTB4
SLC35G6
POLR2A
SLC9A1
TMEM107
MKNK2
POLDIP3
FSCN1
BAIAP2
C12orf65
FAM43A
NXF1
SDC4
HSPA1B
UBE2S
PFKFB3
VAMP1
PRDX1
TTI2
RNF19B
POLR3D
PITRM1
KDM4A
UNK
INTS5
VASN
FUS
TRIM25
NAGK
MICALL2
PLEC
SERPINE1
DGAT1
FBF1
PABPC1
TOB1
SOCS1
BTG1
POR
PLK2
DNAJB1
EIF4A3
AFF1
SIRT4
NCEH1
USP42
SRSF3
HNRNPH1
GADD45B
ZDHHC4
ARL15
LDHA
H3-3B
H4C14
SPTAN1
PTPN6
C12orf57
H4C11
MTHFD2
TRA2B
TFRC
SRSF6
PSAP
IER3
SDCBP
EXT1
TBC1D22A
LRCH4
FBXO24
ADCK5
SOCS3
CYCS
FLOT1
POLR2J3
PRRG2
NOSIP
RBM25
TGOLN2
ZBTB45
HNRNPAB
TTPAL
POLG
SGF29
KIF5B
NEU1
IER5
DYNLL2
BLOC1S2
DENR
SESN2
EIF4G2
PNP
NARF
IFRD1
H4C15
TUFT1
DESI2
RINT1
TAF4
UBE2D1
ORC5
C1QTNF6
H4C3
H1-6
R3HDM4
RARS1
SLC1A5
ERRFI1
RELT
H2AX
PABPC4
SKP1
SQSTM1
BSG
NANS
RPL3
GNAI2
ZC3H12A
TATDN1
NDUFB9
FDXR
HNRNPA2B1
CBX3
MED11
DDX5
CEP95
ZFAND5
ZNFX1
TAGLN2
TRIM28
SPPL2A
SLC16A3
SLC35G1
APTX
HBEGF
DNAJB4
NTMT1
DNM1L
KANSL2
MAT2A
RBM34
PHACTR4
MLXIP
SLC38A2
CITED2
P4HA1
PDLIM7
NUDCD1
PTDSS1
MTERF3
FTL
BRMS1L
MGAT1
DNAJA1
HEXIM1
ARL6IP1
TUBA1C
ZNF248
PLAG1
CHCHD7
SPRING1
RNFT2
HEATR5A
RNF14
CNNM4
ALG6
OAT
PHLDA2
KLHL12
IMPA1
UAP1
SMURF2
DRG1
ARL4D
STRAP
PPIF
RPS9
CDKN1A
TNFAIP8
BBC3
TRAF4
ZBED8
SLC3A2
NBN
TMEM199
POLDIP2
SENP5
ERCC1
METRNL
ZCWPW1
MEPCE
USP45
NET1
NDRG1
DYNC1H1
TRIB1
SIL1
FARSA
CALR
ASCC1
ANAPC16
RND1
LRPAP1
CSNK1G3
PPP1R3C
SLC30A5
RPLP0
INTS13
FGFR1OP2
STK38
TERF1
LOC100287896
LIPT2
AMACR
C2orf42
TNFRSF10D
S100A13
TUBB2A
STIP1
SPIDR
NASP
SMIM12
B2M
MRPS25
GTF2B
CSKMT
C11orf98
PPP1R12C
XKR9
LACTB2
IER5L
RHOB
PTPRA
PTPN2
SERINC5
SRP68
NRBF2
FAM133B
CEBPB
MIGA2
HIF1AN
IRF1
HLA-E
WIPI2
INTS6
PARK7
GRB2
CCS
CCDC87
PUS7
RNF135
FAM83D
OAZ1
GOLPH3
SUPT4H1
CYP20A1
RELL2
IMPDH2
EEF2
SGK1
EFR3A
ZNF143
YWHAG
TMSB10
ZFAND2A
RAB11A
CRISPLD2
GPR89B
PRMT9
MYH9
TSTD3
RNF34
RPAP2
GLMN
TECR
RPL12
LRSAM1
THBS1
CAVIN1
DGKH
DYNLL1
RMDN1
EHD1
PPFIA1
DBNL
GPR89A
SLC26A2
KDM4B
PRPF4
FAM126A
CDC26
IQCD
E4F1
RBMX
RIOX1
UGP2
SWI5
GOLGA2
PARP2
LRIG2
TBC1D31
RIPK2
AHR
NFKBIA
MED17
NCOA3
HDAC3
ZBTB37
SERTAD1
PTPN1
STAT1
BTBD10
FER
ADRB2
PPP1R15A
UBA2
FBXW11
TNFAIP2
TEKT2
ADPRS
TAF13
TMX1
SLC2A3
RBM6
TMEM79
SMG5
KISS1R
DUSP1
STX10
IER2
EEF1A1
C19orf48
FOS
RBM14-RBM4
RBM14
DENND6A
SELENOT
PIEZO1
GOSR2
BZW2
ANKMY2
RASA1
DNTTIP2
ALDOA
TUBB4B
TEP1
C15orf39
ZMAT3
YLPM1
SLC8B1
TAF12
SCFD1
ATP5F1B
TMEM151B
NFKBIE
CPEB4
RPS3
LIMA1
NUDT15
TRIP11
TM9SF3
ACER3
PSMD14
SRSF5
FLNA
RGS3
KCTD7
ACAP2
HSPA5
ICE1
CIRBP
ALAS1
MFAP3
FAM114A2
CCDC80
ADSL
GALR2
TMEM170A
ATP6V0C
THOC3
TMEM249
SLC52A2
FBXW2
FBXL6
NPM1
COTL1
SLC20A1
AFG3L2
SEPHS2
IPP
JUNB
DPY30
RPL13A
RETSAT
ELMOD3
DIMT1
NUFIP2
FAM220A
S100A1
SPECC1L
TPI1
HMBS
HMGCS1
EI24
CUL7
SAT1
VCL
MATR3
ZCCHC24
GTF2A1
SMN2
SMN1
MRGBP
EIF3A
AMOTL2
FAM234A
DELE1
TECPR2
CINP
ZNF326
CZIB
RIDA
POP1
HRH1
SLC35C2
AKAP1
CRLS1
RUNX1
CCNG1
GTF2H5
DSCC1
EIF4A2
BCAR1
NCL
DNMT1
ABTB2
RAB2A
BORCS5
TKT
GSTP1
FGFR1
PDZD8
MGRN1
HERPUD1
CLIC4
ZNF622
WDR47
C7orf26
SLFN5
ASH1L
TUBA1B
GBA
TMEM138
MSANTD2
CYB561A3
ING1
SLC16A1
KLHL7
ABTB1
TRA2A
TNIP2
HSP90AA1
CNBP
TAX1BP3
EMC6
POLR2D
PRPF39
MTRES1
KATNBL1
SAR1A
GSTK1
JUN
LZTR1
TNRC6B
ERN1
SLX1B
SLX1A
BOLA2B
BOLA2
PSMD8
SIKE1
TMBIM6
ATG16L1
SPATC1L
KPNA1
STK38L
SNF8
NSF
MCL1
EPHA2
ASPSCR1
RSAD1
ATOX1
PCTP
ARPC1A
RABIF