ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111321 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◢ SRX111320: BE(2)-C

◣ SRX111321: BE(2)-C

◢ HOXC9: STRING

NRL
DCAF11
DEPP1
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
ING3
ZSCAN31
KIAA0319
SEMA5B
PRR13
HOXC4
TOMM40L
SLC25A25
KATNB1
PIH1D1
SLC17A8
DIABLO
RIMBP2
PPP5C
ZNF654
CGGBP1
C1orf185
GFRA3
WDR74
MTRNR2L2
DRGX
CENPF
GABRA1
SRGAP2C
SRGAP2B
GRWD1
TIAM2
RAPGEF2
ABCA12
LENG9
KCNAB2
PHF14
ELAVL4
CHD1
ZBTB45
HOXC6
MTRNR2L8
ABCB8
CHCHD3
TNFRSF19
COX16
TAS2R20
KHDC4
EVI5L
STON2
ZNF488
EEF1AKNMT
TFPT
PRPF31
SYNE3
ABAT
VPS52
RPS18
CDCA3
PWWP2A
H2AC19
H2AC18
DLX6
TIMM44
RAB11B
RGS4
AOPEP
MPP4
MFSD8
ABHD18
ZNF350
MFSD12
SIRT4
ZNF510
USP40
RIC8B
PRKAG2
RAB39A
KHSRP
CCNG1
PAFAH1B2
ZNF555
ACVR1
TOM1
GOLGB1
CHD9
PMVK
RMDN2
SH2D3C
MRPS14
ABT1
ASNSD1
ASDURF
RNF4
EFCAB6
ITSN1
CRYZL1
HEXIM2
CAPN10
ILF2
SLC17A2
ZNF608
NEMP1
ANKHD1-EIF4EBP3
ANKHD1
EIF3D
EPRS1
GSN
LSMEM1
XAB2
PSMC1
VEPH1
FDPS
TMEM126B
DLG2
LIN37
TCERG1
PRRC2B
TBRG4
TMEM60
PHTF2
SUGP2
ARMC6
MRPL28
RHBDD1
MRPL27
EME1
HOXA3
ZNF132
PDCD1
TPGS1
FLYWCH2
NOMO1
DBH
TBX2
DPH2
MC4R
SLC18A1
TCP1
MRPL18
ASF1B
AP1M1
SPSB3
NUBP2
ARHGEF3
AKAP11
EHD4
MDM4
STAMBP
GBA
RPS7
VSTM5
MN1
SNX6
C3orf38
ZSWIM4
ZNHIT3
CAND1
CCDC33
BAX
ZNF566
SDR39U1
ADGRE5
CREBL2
FCF1
AREL1
ZNF749
PTBP1
GPRC5A
WRN
ESRRB
ZNF417
INTS4
NGDN
RIMS2
RUFY3
NFYC
ANO6
RABGAP1L
DDX41
NDUFB5
MRPL47
RPS26
ULBP3
TCF4
METTL25
CCDC59
TNRC18
CCDC38
RP1L1
UHMK1
TXNRD1
LRRTM3
CCDC130
POLR1H
RBM25
HES1
PABPN1
PDE4D
CCDC89
SKA2
PRR11
ZBTB40
FOXN3
GRAMD1B
ZNF430
SRPK2
ALG10
UBA5
YLPM1
MFSD6
SEL1L
TDRKH
ZSCAN32
ZNF174
FAM214A
LRGUK
LPAR5
BBX
CFAP69
USF1
C12orf73
PALB2
DCTN5
CEP41
CNPY2
CNIH4
FBXO34
CNOT3
UBE2J1
MAIP1
TRAF7
LGALS8
ZFYVE26
HNMT
GPR108
COX7C
DMAC1
FOCAD
ID4
CALM2
E4F1
RPL27
MYT1
DDA1
UBE2S
CFAP20
PTPRE
SPATC1L
TOMM40
CYTH1
CEP85L
ALG10B
HAND2
ZNF331
DHX8
CHAC1
POLR3E
MRPL11
SLC8A1
JPT2
GLDN
WDR46
PFDN6
COX20
GTSE1
ERCC6L2
ICE1
TUFM
SH2B1
LARS1
C15orf62
METTL7A
ZNF25
RBM12
CPNE1
MTA3
SERP1
EIF2A
ZNF226
COG7
RHOB
BCAS3
ASB8
KCNT2
C12orf43
SF3B6
FAM228B
MLC1
WWOX
MIA3
KCNH2
BAZ2A
UTP25
SLC25A16
SHC4
ANKRD40
ZC3H11A
TXNL4B
SURF6
SEPHS2
HOMEZ
ETFBKMT
EHMT2
DHX38
DCAF15
C2
ABHD16A
ZNF586
COG3
ZFAND6
CENPA
KCNMB2
CDK12
ZNF682
LONP1
CATSPERD
RFT1
INTS5
TRIM24
PXMP4
CDC25C
DAB2IP
LOC100289561
ELMO1
PRMT5
PARP1
CDKAL1
SUPT7L
SLC4A1AP
SARS1
CARD8
BDNF
TMEM231
ZNF30
OTUB2
FOXP1
TRMT61B
VPS45
AUH
MXI1
BTN3A1
COPS7A
TAF1A
DUT
ZNF317
SLC39A9
ERH
ZNF234
THOC5
SLIRP
ALKBH1
NOMO3
SLX4IP
PHB2
RBP5
CLSTN3
ARHGAP24
TUBG1
RETREG3
VLDLR
ARL17B
ARL17A
ZNF227
RAB30
KNL1
ZNF503
ADAMTSL2
MGAT4C
STRA6
TRIOBP
SP2
SHD
SELENOW
TP53BP1
YIPF4
RBL2
H3C13
HP1BP3
CDIPT
ZSWIM3
ACOT8
SEC14L1
PHF12
PIGM
MAP2K4
TARS2
CNOT1
TTC31
CCDC142
POLR2J3
ZNF773
ZBTB3
TMEM41B
FAAP24
EML2
CEP89
CCDC86
SUGT1
ZFHX4
JMJD1C
RTRAF
SMG5
ZNF548
GSK3A
MVB12A
ZNHIT1
UBP1
PLOD3
H2BC6
STK11IP
MBNL1
RBMS2
WDR89
HAGH
FAHD1
TNRC6B
MAST4
SMIM30
DESI2
BLOC1S6
VIPAS39
AHSA1
DPP9
MYH15
HIBADH
RPRD2
OSBPL9
PPIL1
USP54
TYK2
MIOS
MAP2
HNRNPUL1
PRCC
PIK3CA
RAB11A
ZNF738
POP5
C5orf63
BCAS2
MATR3
SNX17
EIF2B4
ERGIC2
RAB5B
ZNF687
SIKE1
COQ7
CSDE1
RAD52
MYL6
FUZ
TAMALIN
MPV17L2
PSMD8
TMBIM6
EYS
ATP2B4
GLIPR1L1
SYMPK
DUSP6
CLDN15
SEMA3C
LNP1
PEX12
LCN6
RASA3
MMACHC
DPYSL2
ZKSCAN4
SLC25A44
NSUN3
FAM72B
DHFR2
TSPAN8
RBM28
ZNF225
MRPS23
ZNF264
FAM222B
EIF1AD
CDK17
BANF1
TRUB2
COQ4
KRT13
TM9SF4
MSTN
TAF5
WBP1L
NDUFB3
FNDC3A
FAM126B
BMF
COL5A2
ZCCHC8
ATP5MC2
VPS29
RAD9B
LETM2
RBM48
PEX1
USE1
YARS2
GALNT14
THADA
RPL23
RBM19
P2RY6
H4C3
FAM98B
YJU2
MARS1
ARHGAP9
SUFU
ACTR1A
TMEM160
ZNF627
KLHL25
ETV5
PCDH15
TCTN3
ASPM
ZMAT2
STT3A
ATF6
SPAG9
ZNF785
TAFA2
NUP58
ARL15
HNRNPA1
CBX5
BANP
CEP128
UTP11
SDHD
BTN3A3
NUF2
TNNT2
DDX49
COPE
TSNAXIP1
RANBP10
MRPL3
RNF150
BAIAP2
PRKAB2
CHD1L
FAM243B
FAM243A
SREK1IP1
CWC27
PNKD
AAMP
CCDC90B
ZNF789
ERCC2
STUM
CCDC146
TMEM259
GTF2H4
TRMT12
SLC41A3
BUB1B-PAK6
YIPF2
TUBB4B
TIMM29
MED30
HTR1A
ETNK1
NIP7
COG8
SIX4
CSRP1
ZNF92
TPD52L2
TMEM69
GPBP1L1
NFATC4
ZNF668
ZNF646
NUTM2E
ZNF267
SIX3
SALL4
CD63
GNRH1
SF3B5
ZNF419
UBQLN4
LAMTOR2
GTPBP3
FCHO1
DIS3L2
TSC1
PLXNB2
GFI1B
ZNF484
PHB
RABEPK
ZNF688
WDR70
UBXN2A
SETD1B
MRRF
LEO1
DUS3L
ATR
ATP7B
ALG11
LITAF
ENDOG
LETMD1
PDCD7
GRPEL1
FFAR3
CHD6
SNX16
FRA10AC1
ATP5MF-PTCD1
ATP5MF
SULT1C4
ZNF229
PES1
MRPL24
FANCM
CBFA2T2
CCNT1
TOB2
SLC30A10
SAPCD2
HOXB8
GARS1
ACTB
ABLIM1
ARNT
GRAMD4
PPIL3
NIF3L1
TIMMDC1
NHLRC4
N4BP2L2
FOS
JARID2
ANGEL2
MED16
MVK
RPS27
ZNF43
PLEKHA6
OXCT1
OIP5
NUSAP1
KCTD5
TDP1
SMDT1
SLC33A1
LARP4
EFCAB2
EFCAB11
ADPGK
ADD3
RPS11
SIRT2
NFKBIB
PPP1R3D
FAM217B
PSMD1
MCCC2
TBL1X
DPP6
EIF3F
STC1
LRIG2
ZNF384
TOM1L2
TMX2
RBP3
P4HB
NSF
MTERF4
MIEF2
MED19
FZD2
ERV3-1-ZNF117
ERV3-1
DRC3
ATF7IP2
ZIK1
NFATC2IP
SSBP1
ZNF304
ZNF805
ZNF473
VRK3
ZNF776
LINS1
ASB7
YAF2
ZNF324B
PRUNE2
METTL3
CELF3
MYT1L
RAB3C
TTR
SYNJ2BP-COX16
SYNJ2BP
B4GAT1
DDC
OS9
TAPBPL
TFB2M
CNST
NBPF15
ZNF175
TATDN3
PCNX4
NSL1
ICAM2
H4C12
APH1A
PAXBP1
WDR36
SPRY4
GPR85
SOX4
GGTA1
PHF5A
ACO2
SMIM18
GAN
CMC2
TMEM245
LUM
SRFBP1
SLX1B
SLX1A
RPN2
PIK3R2
OGA
MEIS2
MAP3K3
MALSU1
FAM227B
DTWD1
BOLA2-SMG1P6
BOLA2B
BOLA2
PPP6R1
MRPL44
NDUFAF5
ESF1
SSUH2
ANAPC15
HAO1
NPY2R
BRMS1L
SLC35E2B
MIS18BP1
INO80D
COMMD4
APOLD1
CEP120
DNM2
USP30
METTL17
H3-3B
GPR1
FAM126A
DLC1
ANKRD54
PSMD3
ACTR6
PAF1
MED29
STK36
SOS2
RNF25
PSMB7
MTRNR2L5
LMNTD1
KIFBP
H2BC12
H2AC12
DLGAP5
CFAP251
CD2BP2
LUC7L2
FMC1-LUC7L2
FMC1
HNRNPL
PPP1R12C
PEF1
TUT1
TEDC1
PAFAH2
NBR1
LDHA
LAMTOR1
CTU1
TOX4
RAB2B
SEMA6D
SNRPE
TPP2
LTA4H
LIMCH1
GRN
EPDR1
HDAC9
SYBU
PNISR
SP1
CAPS2
NDUFA5
KCNK2
FAM185A
NOMO2
HS3ST5
ZNF74
RAD51AP1
C12orf4
ZNF12
NREP
HEXIM1
H2BC4
H2AC6
GCDH
FAM72D
FAM72C
CLEC16A
CEP78
BUB1B
ANP32E
SEMA3A
OTUD6B
IFIT2
FAM122A
ELOVL6
CCNB1IP1
DHX16
RTN4IP1
QRSL1
SHPRH
ZNF433
P2RX6
GPATCH1
FBXO9
DDX23
CEP20
RBM8A
SH3PXD2A
RSPH4A
NUMA1
LRTOMT
BRD2
ATP5F1B
MRTFB
PIP4P1
ZNF443
TTC5
TOM1L1
MCF2L
LCMT1
C22orf39
RBBP5
KLHDC9
RAG2
PRH1-TAS2R14
PRH1
MCM3
CIC
IPO4
KLHL20
KRR1
TP53TG3F
TP53TG3B
LOC102723655
CCT5
C16orf91
ATPSCKMT
MBIP
CEP126
COX6A1
MORC3
FREM1
ARMH3
FDXR
NCAM1
ZNF155
ZNF780B
SLC25A45
RSRC1
NBEAL1
H2BC15
H2AC15
CABLES1
ARID4A
FEM1A
NABP1
ZNF736
IVD
ZSCAN9
PGBD4
EMC7
ZNF500
PRRC2A
MYCN
ERCC5
CACYBP
AP2S1
SLC26A7
RGS12
NDUFS1
EEF1B2
TOMM7
SAMD8
POLQ
FKBP14
ATP2C1
RABL3
GTF2E1
GPR146
CFDP1
ADARB1
ZNF565
ZNF146
RPS5
RAI14
QDPR
SLC30A5
RC3H2
SNRNP70
PHKG2
IL19
C8orf37
RAB3GAP2
QPRT
NOL6
DCAF1
SHF
RNF40
NUP107
CEBPZ
CCDC189
OGFOD1
NUDT21
NRBF2
GLRX
SPRING1
RNFT2
TOGARAM1
RFX1
KLHL28
POLG
ZNF790
KNTC1
IFT140
GON4L
CRAMP1
CATSPERG
WASHC3
MRPL54
APBA3
SF1
ZNF493
SNRPB
RPL23A
PRDM10
CLVS1
KDM4D
CWC15
DDX46
TBCCD1
SARS2
MRPS12
DNAJB11
TSEN34
MBOAT7
GOT1
LGALS3BP
DDTL
DDT
MTRNR2L9
ATP5MC3
PDCL
CWF19L2
SMARCD2
AP3M2
THUMPD1
RPL6
SFR1
SLC4A2
CDK5