ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064482 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◢ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◣ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◢ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

PMEPA1
NODAL
CCDC92
WDR74
FGF8
STOX2
CAV1
LEFTY1
SKIL
RAD51AP2
MTRNR2L2
SNX18
NPFFR2
CHD1L
PRKAB2
DST
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PRICKLE1
MTRNR2L8
NBPF1
CER1
FBXO40
PIP4P2
RNF141
STMN1
NDRG2
TIMP4
STK17A
USP53
L1TD1
CYB561
CFAP410
ITGB1
ZNF148
NUF2
USPL1
HMGB1
CALD1
HNRNPH3
PBLD
BCKDHB
CTSC
ARID2
LYNX1-SLURP2
LYNX1
MTF2
ZSWIM4
KAT6A
LRRC37A3
KRAS
MRI1
TBX22
MOB4
DCAF10
FRA10AC1
TCEAL8
JMJD1C
ASIC2
AVPR1B
DCLK1
SYPL1
NOTCH2
PPA2
FOXN3
SRSF2
MFSD11
MAX
BAMBI
PLPP2
RAPH1
PDPN
NOCT
AKIRIN1
NFAT5
MNAT1
CCNL1
NIPBL
CBWD5
EFEMP1
DNAJC10
RNF43
PPM1H
FAM120B
WASHC4
CEP83
VPS13B
BUD13
MSMO1
LRRC57
HAUS2
KDM1A
LRP12
KDM5B
NEDD4L
GLRA3
DAB1
WFDC8
FEM1C
ZNF518A
PIK3R3
TNPO1
ARIH1
ZNF286A
HSP90AB1
CORO2B
COPS8
TMEM106B
SET
DUSP6
MARCHF7
NDUFC2-KCTD14
NDUFC2
CDC42SE1
MLLT11
CCN2
RTN4
G3BP1
LYPLAL1
MMADHC
STRA6
CTNNB1
MTX2
USP37
CNOT9
MICU2
H4C12
DCP1A
WDFY1
SMAP1
PDE4DIP
PLEKHA5
SNRPN
HEXB
LIMS1
XPO5
POLH
ALDH7A1
ATP23
DNAJC9
ANKRD46
RWDD1
LARP4
MRPL39
NT5DC3
KANSL3
VRK2
GMCL1
MRM3
GLOD4
PCNA
DVL2
RANBP3
RIMBP2
C1orf74
CCDC88A
IFNAR1
ZFHX3
TPM1
SPOP
IGSF8
CFAP161
C3orf52
LRRTM3
DNAJC25-GNG10
DNAJC25
NCOA5
METAP1
OPA1
SPRED1
WDR41
JADE1
SH3RF2
GOT2
ID1
PCK2
SMC5
ANO10
ABHD5
LRCH3
LRRC59
SKA3
MRPL57
FAM227B
DTWD1
ACCS
NFIA
HES5
PDE1C
RRP1B
HSF2BP
TSEN2
NUP54
STX18
KCNT2
SARAF
WDR48
SCN11A
TBC1D5
MAP7
MARCHF3
WWC2
UBAP2L
C1orf43
GLS
MYL12B
HTR5A
ASCC3
TXNL4A
GADD45A
DCP1B
DHCR7
ETV1
ZC3H6
NCK1
CYRIB
ADARB1
FAM149B1
ECD
DPY19L4
PIPOX
ARL5A
MRPL21
IGHMBP2
DPYSL2
SRA1
MTMR2
ABHD10
SCG3
PAH
SUPT20H
ALKBH3
STEAP1B
CALM1
ZSWIM7
TTC19
SSBP2
ANKRD18B
STK26
MAD2L1
FDXACB1
C11orf1
GNL2
DR1
ARHGEF12
PGGT1B
EXOC2
SLC11A2
PMAIP1
CORO2A
PRUNE2
NFKBIZ
MAPK8
OCIAD2
KCNB1
MTHFD1L
TRPM3
RPL5
ITGAV
SREK1
PDE7A
RPS16
TBC1D32
LLGL2
MMAA
FOXJ3
SPRY2
MYLIP
RGS9
LRRC3
RAB23
SNRNP48
FBRS
LRRC8B
EFHD1
MARCHF6
CDC42EP3
TBRG4
HECTD3
NPAT
ATM
NAP1L3
FAM133A
TRDMT1
TMEM14A
MRRF
BEX3
DNAJB2
SLTM
SNAPC5
UNC50
COA5
DLG2
ETV3
CEP126
FILIP1L
HERC3
PYURF
PIGY
TRMT11
FKBP3
SON
GART
MAML3
PARPBP
NUP37
KIAA1958
C9orf147
CCDC43
COL21A1
U2SURP
RMND1
ARMT1
MB21D2
RTKN2
C5orf24
UGCG
ZMYND12
PPCS
CCDC30
STT3B
FIGN
GSK3B
HASPIN
LUC7L
SACM1L
ALKBH2
ZNF250
ARHGEF5
SMIM14
PSMG1
ZC3H15
DUS1L
AMOTL1
SDHAF3
BRIX1
BCAP29
RWDD3
CALM2
SDR39U1
ZFP91
VSNL1
OSBPL1A
CIPC
ZDHHC22
EPCAM
MIXL1
SOD2
WTAP
CUL3
GTF2H2
ASRGL1
ATF3
CHD7
SRSF7
CSRNP2
FAM53C
CDC25C
ZBTB4
POLR2A
SLC9A1
JPT1
POLDIP3
SLC7A5
MKNK2
C12orf65
FSCN1
NXF1
HSPA1B
BAIAP2
UBE2S
FAM43A
VAMP1
PRDX1
TTI2
RNF19B
POLR3D
PITRM1
KDM4A
SDC4
INTS5
NAGK
MICALL2
PFKFB3
DGAT1
PABPC1
TOB1
FUS
SOCS1
BTG1
POR
PLK2
EIF4A3
NCEH1
USP42
SRSF3
PLEC
SERPINE1
ZDHHC4
HNRNPH1
ARL15
LDHA
H4C14
SIRT4
SPTAN1
C12orf57
AFF1
MTHFD2
DNAJB1
TFRC
SRSF6
TRA2B
H4C11
VASN
SDCBP
PSAP
TBC1D22A
ADCK5
CYCS
POLR2J3
PRRG2
NOSIP
RBM25
TGOLN2
SOCS3
HNRNPAB
TTPAL
POLG
TRIM25
SGF29
KIF5B
LRCH4
FBXO24
NEU1
IER5
DYNLL2
BLOC1S2
DENR
SESN2
EIF4G2
PNP
H4C15
DESI2
RINT1
H3-3B
IFRD1
UBE2D1
ORC5
H4C3
TAF4
RARS1
EXT1
ERRFI1
RELT
H2AX
PABPC4
SKP1
BSG
NANS
RPL3
TATDN1
NDUFB9
FDXR
GADD45B
HNRNPA2B1
CBX3
MED11
DDX5
CEP95
NARF
ZFAND5
ZNFX1
TAGLN2
TRIM28
SPPL2A
SLC35G1
APTX
GNAI2
KANSL2
MAT2A
RBM34
TUFT1
PHACTR4
SLC1A5
C1QTNF6
P4HA1
NUDCD1
PTDSS1
MTERF3
BRMS1L
DNAJA1
HEXIM1
ARL6IP1
ZNF248
PLAG1
CHCHD7
SPRING1
RNFT2
HEATR5A
RNF14
CNNM4
ALG6
OAT
PHLDA2
KLHL12
IMPA1
UAP1
SMURF2
SLC16A3
DRG1
STRAP
TUBA1C
PPIF
RPS9
TNFAIP8
DNAJB4
ZBED8
SLC3A2
NBN
HBEGF
TMEM199
POLDIP2
SENP5
ZCWPW1
MEPCE
USP45
NET1
NRL
DYNC1H1
TRIB1
SIL1
ASCC1
ANAPC16
LRPAP1
CSNK1G3
PPP1R3C
SLC30A5
RPLP0
INTS13
FGFR1OP2
SLC38A2
STK38
CALR
TERF1
LIPT2
TRAF4
AMACR
C2orf42
TNFRSF10D
S100A13
TUBB2A
STIP1
MGAT1
NASP
SMIM12
B2M
GTF2B
CSKMT
C11orf98
PPP1R12C
XKR9
LACTB2
FTL
RHOB
IER5L
PTPRA
PTPN2
SERINC5
NRBF2
FAM133B
MRPS25
MIGA2
HIF1AN
IRF1
HLA-E
WIPI2
INTS6
PARK7
GRB2
CCS
CCDC87
PUS7
RNF135
FAM83D
OAZ1
GOLPH3
SUPT4H1
CYP20A1
IMPDH2
CITED2
NDRG1
EEF2
SGK1
EFR3A
ZNF143
YWHAG
ID2
RAB11A
CRISPLD2
GPR89B
PRMT9
TSTD3
RNF34
RPAP2
GLMN
RPL12
LRSAM1
RMDN1
EHD1
PPFIA1
SRP68
TMSB10
GPR89A
SLC26A2
KDM4B
PRPF4
FAM126A
CDC26
TPCN1
TECR
IQCD
METRNL
E4F1
RBMX
RIOX1
UGP2
DNM1L
PARP2
ARL4D
TBC1D31
SPIDR
AHR
NFKBIA
MED17
NCOA3
RELL2
HDAC3
ZBTB37
STAT1
BTBD10
FER
ADRB2
UBA2
SQSTM1
ADPRS
TAF13
LOC100287896
TMX1
SLC2A3
RBM6
SMG5
LRIG2
TNFAIP2
NTMT1
EEF1A1
C19orf48
RIPK2
FOS
RBM14-RBM4
RBM14
DENND6A
GOSR2
BZW2
ANKMY2
RASA1
DNTTIP2
ALDOA
TUBB4B
TEP1
C15orf39
ZMAT3
YLPM1
SLC8B1
TAF12
SCFD1
ATP5F1B
R3HDM4
NFKBIE
CPEB4
RPS3
NUDT15
TRIP11
TM9SF3
PTPN1
ACER3
PSMD14
SRSF5
KCTD7
ACAP2
CEBPB
ICE1
ALAS1
MFAP3
FAM114A2
CCDC80
ADSL
TMEM170A
ATP6V0C
THOC3
THBS1
SLC52A2
FBXW2
FBXL6
NPM1
COTL1
IER3
AFG3L2
SEPHS2
IPP
DPY30
SLC20A1
RPL13A
RETSAT
ELMOD3
DIMT1
NUFIP2
FAM220A
SPECC1L
HMBS
EI24
CUL7
MATR3
GTF2A1
SMN2
SMN1
EIF3A
FAM234A
SERTAD1
DELE1
TECPR2
CINP
ZNF326
CDKN1A
TPI1
CZIB
RIDA
POP1
HRH1
AKAP1
S100A1
RUNX1
GTF2H5
DSCC1
CAVIN1
EIF4A2
NCL
DNMT1
ABTB2
SWI5
GOLGA2
RAB2A
BORCS5
FGFR1
PDZD8
MGRN1
HERPUD1
CLIC4
WDR47
AMOTL2
C7orf26
ASH1L
TUBA1B
DYNLL1
GBA
TMEM138
MSANTD2
CYB561A3
ING1
SLC16A1
KLHL7
VCL
ABTB1
DGKH
TRA2A
TNIP2
HSP90AA1
CRLS1
CNBP
TAX1BP3
EMC6
POLR2D
PRPF39
MTRES1
KATNBL1
SAR1A
TKT
LZTR1
TNRC6B
SLX1B
SLX1A
BOLA2B
BOLA2
PSMD8
PDLIM7
SIKE1
TMBIM6
CCNG1
KPNA1
STK38L
SNF8
NSF
MCL1
EPHA2
ASPSCR1
RSAD1
ATOX1
PCTP
RABIF
C6orf89
BICD2
PGAP2
XRN2
ZCCHC24
SAT1
RBM12
CPNE1
SSNA1
ANAPC2
NOL11
MAP3K3
KCNG1
RAB6A
MLXIP
ZNF800
MAPK1IP1L
HSPA5
GLUL
ENTPD5
BBOF1
TOB2
PRKRA
PJVK
LIN7C
GSTP1
PLK3
JUN
TMEM39A
DCXR
DENND10
LATS1
DBNL
SPATC1L
GNAI3
APPBP2
GSTK1
SLC35C2
TMED9
FAM13B
ACSL3
KIF18B
TFAM
ZDHHC16
EXOSC1
EPHX1
RPL6
ATP6V1B2
TAF15
AARS2
KCTD13
PA2G4
CSRNP1
HES6
ATP5F1E
DDX3X
MACROH2A1
WDR11
IMMT
MKRN2
CCDC61
RFESD
DPH5
ZFAND1
SMOX
SAV1
RBBP5
TSPAN17
JUNB
OTULIN
EIF2AK1
ZKSCAN2
CEP85
GFUS
PDIA3
ZNF546
TSPAN10
NPLOC4
ZNF622
RGS2
ABHD16A
OGDH
ERN1
C16orf72
TACC1
ZNF468
FBXW11
ZNF33B
DUSP1
POMZP3
TMEM71
PHF20L1
PTMA
PRR13
MOCS2
C2orf69
TK1
AFMID
BOLA2-SMG1P6
BTBD1
THADA
C12orf29
SETD9
ISCU
EFNB2
RND3
NEK1
YKT6
OPN3
CHML
TBCCD1
MAP2K2
MAEA
DDIT3
GK5
TMEM242
HARS2
HARS1
RPL22L1
GOLGB1
LRRC46
NUP133
RPS20
MIB2
CYTH2
GATD1
POLR2C
NEK4
CBFA2T2
SLC38A10
PTPN11
SMARCB1
RRN3
AMZ2
DNAL1
NOP56
PYROXD2
LIMA1
AHCYL1
NFE2L1
EIF5
STXBP3
SCRIB
YAE1
RDH11
VEGFA
NABP1
POLE4
CIRBP
RPS27
CCZ1B
HNRNPLL
STK11IP
MTFMT
GTF2H2C
GTF2H2C_2
SLFN5
MLF2
CYB5R4
SLC25A3
TBCE
RPS12
RPP21
WDR70
CDC37L1
RSPH3
DMWD
BRD2
GNAS
ESYT2
DDX56
KLHL21
KNTC1
TKFC
DDB1
ADSS2
ARHGAP39
TBC1D7-LOC100130357
TBC1D7
SLC15A4
APMAP
PALLD
PSMD9
HPD
COPG1
OGFRL1
TMEM68
TGS1
LMTK2
ATP5MF-PTCD1
ATP5MF