ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026263 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◣ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

SNX12
KMT2A
ZFP64
ZNF76
RBBP8NL
HSPE1-MOB4
HSPE1
HSPD1
CHI3L1
ZNF143
CYP2R1
NEK2
COL23A1
HK1
KCNE3
CTSK
C20orf204
MUC3A
KRT8
RARB
TOMM40L
APOA2
HES1
NFAT5
SALL4
TRIM48
HOXB4
HOXB3
WDR74
ZNF341
PMF1-BGLAP
PMF1
RGPD2
ZNF503
CD244
CD300LF
GFOD2
AKAP9
SLCO2B1
CYTH3
STX16
OPRL1
LKAAEAR1
CREB3L1
MRPL21
IGHMBP2
HOXA3
MARCHF8
ZNRF3
KRTAP3-1
SERINC3
AJUBA
TSPAN3
CDK5RAP3
SLC12A3
AP1M1
USH1C
RBM39
RGPD1
KMT2D
MACC1
SULT2B1
MRPL44
ARHGEF12
PMEPA1
ALG10B
ABHD11
CA4
C1orf100
ALG10
STAT3
STAT1
ETFB
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HOXC5
LECT2
MAMDC2
ISX
UNC45B
TFPT
PRPF31
ATF3
MTRNR2L1
LRIG3
NCOA5
MOB4
STX18
OSGIN1
B3GNT6
PDZRN3
ID1
GSTP1
ADARB1
KDM2B
SKIL
WWC2
FRG2C
ANKRD40CL
ZBTB45
MRPS23
LDHAL6A
RAB3C
MKRN2OS
MKRN2
HKDC1
TATDN3
NSL1
CALM2
CDK5RAP1
MEP1A
BCAS4
DUX4
NAALAD2
MRPS31
LRP2
CAPN2
GSTO1
TSPAN32
C11orf21
BCL2L1
HOXB5
CCDC90B
SPATS2L
ZFP62
NUF2
CASC3
CFLAR
ENTPD4
MALRD1
PRSS41
SLC33A1
DDX59
LIFR
TOB1
TMEM230
TOP3B
ADAP1
OSBPL1A
PRSS23
CDR2
FRG2
TACO1
COL5A2
H4C14
CDX1
C2orf88
DDX23
LAMB3
GSG1
NDUFS7
TMC7
PTPN6
C12orf57
HSPB3
TARS2
GSDMB
CTSB
GBA
IKZF3
SMG7
LRRC59
UBB
USP30
TRIP4
EPCAM
ANKRD1
WWC1
RNPEP
SNX5
MGME1
LGALS3
TUT1
TMEM141
S100A2
WASHC2A
PHLDB2
INTS5
MICAL2
NFE2L2
LRP6
H4C12
CPEB4
NTF3
EIF3D
KAT6A
QSOX1
RHNO1
FOXM1
EPRS1
ADNP
ZNF770
NDUFAF5
ESF1
ADAT1
VILL
SNTB1
LAPTM4B
SLC12A2
TYMSOS
TYMS
DPP4
NAGLU
GIP
EPN1
ZNF226
GTF2H2
COA1
TBL1X
MTRNR2L8
NXPH2
OR9Q2
ZC3H6
PHIP
GPBP1
CLTB
TMPRSS4
OR10AD1
C4BPB
LIPK
TSFM
CRBN
SLC7A5
YAP1
SLC7A6
SPOP
OGT
CLDN9
MAIP1
SIX1
H4C15
SBK3
GARS1
RAD51AP1
C12orf4
NOTCH2
POLDIP3
SELENOH
VTN
SARM1
SPATA2
VIL1
TTI2
TOB2
ATP5F1E
LOC102723996
ICOSLG
TBX4
NNMT
PERCC1
KANSL3
FER1L5
SP5
INTS9
HMBOX1
ZNF510
USPL1
HMGB1
FCRLA
FEM1A
BTNL8
ASXL1
MEIS1
CIAO3
HOXC6
HOXC4
ZC3H10
RPL41
SP2
PHF12
UBE2Z
ZNF276
VPS9D1
ADPGK
SYNRG
DOCK6
MCM7
AP4M1
XPA
RHOH
AMACR
BANP
DYNLT3
NDUFV1
CLNS1A
RBM47
GTF2H2C
GTF2H2C_2
EIF4H
MAZ
OTUD7B
FBXL17
INAVA
TMEM126B
DLG2
GPATCH1
ANAPC5
PDE6A
SLC46A1
UBR2
TSN
CXCL9
ART3
DUT
HOXA5
CERK
TMEM107
TFAP2A
HOXB8
LRRC19
DESI2
FCAMR
NFKBIZ
SLC30A10
GUCY2C
FHL2
SLC6A7
TRIM2
HNF4G
SPATA46
C1orf226
TBPL1
UGT1A1
WBP4
ELF1
FBXO31
PIGR
AP2S1
RAB6D
SPAM1
HOXA4
RNASE6
RGS2
CDC14A
SPRED2
DEPP1
FLNB
FGFBP1
KIAA2012
SLC25A27
CYP39A1
RGMB
MAP3K14
CEACAM16
NOS2
CDH17
ZNF608
WASHC1
KIAA1217
RNF114
QSER1
GBF1
TSPAN8
RPUSD4
FAM118B
UGT2B10
FGB
C3orf52
SH3D19
CLRN3
RAMP1
IQGAP2
VSX1
ZZEF1
CYB5D2
ARHGAP17
ZNF3
CELA3A
RIN2
EIF4G3
DUS4L-BCAP29
DUS4L
COG5
CASP4
HEPH
WDR77
ATP5PB
DUSP18
SIRT4
GEM
KIF16B
PTPRF
SYBU
ABLIM1
DCUN1D2
SLC17A4
SEMA3C
MAVS
ADGRE5
DNAJC25-GNG10
DNAJC25
SCT
CDHR5
TES
GSN
ROCK2
SLC20A1
PDE4D
ACOX2
SEC23A
ADD3
ERLIN2
USP7
ST6GALNAC4
RBM25
DCP1A
LAMA3
MYO18B
MYRF
NXPE2
LRRC66
TM4SF4
HESX1
APPL1
GGH
ZNF563
PIK3C2A
MATR3
ARHGAP45
GCNT4
HNMT
MCTS1
CASP5
MBNL2
PRR15L
ADGRF4
KRTAP4-2
KRTAP4-1
ANKRD27
C3orf85
TMEM54
SOX30
REG1B
C5orf52
NAPEPLD
CIDEC
NWD1
ABR
TMEM45B
RNF145
REG4
MIDEAS
E4F1
SERPIND1
PPARG
MAP1LC3B
KLHL30
LIMA1
TMEM87B
PAK1
AKR1C3
TMEM69
NNAT
IL33
GPBP1L1
BLCAP
RGPD6
ENGASE
PRSS3
IGFL4
TNFSF15
RNF186
CXCL2
TPD52
MGAM2
PRKCZ
SGK3
ACAN
PLAAT2
HACD2
FABP1
TDRD1
CCDC186
TARDBP
ATP2B4
MIA3
ACVR1B
IGSF23
C19orf33
RAB14
ARHGAP27
RFLNA
PRICKLE1
ANO4
COX16
CALML4
NPIPB4
ARHGDIB
GOLIM4
NXPE1
HNF4A
FAM107B
PHF19
RNF43
PKP2
CRYM
LOC388282
SF3B4
MTMR11
TNFSF11
KRT20
KIFC3
CDK11B
CDK11A
MLF1
ZCCHC14
IFRD1
ARHGEF18
HOXA9
HOXA7
ME3
JMY
INTS4
FOXN3
CLIC5
SGCB
PLEKHG1
H3C15
H3C14
H2AC19
H2AC18
GRAMD2B
COX20
RAD54B
FSBP
KRT19
FAM53B
SLC45A4
LRRC31
SLC4A9
PPIL3
NIF3L1
NT5DC4
REG3A
LDLRAD4
NOSTRIN
MGAT4A
PPP1R3D
FAM217B
NGB
IL34
NR0B2
SFR1
SLC3A1
PRAG1
NSFL1C
CNNM3
PES1
ZNF721
PIGG
TCF20
STX1A
SCAF11
PRDM4
MTCL1
ZMPSTE24
PI3
CPLX2
BCAS1
CLDN4
SLC12A7
METTL15
KIF18A
CYTIP
CLOCK
TXNRD1
RGPD8
RGPD5
UTS2R
MLPH
TRIM15
TRIM10
ZNF248
LASP1
NPIPB13
NPIPB12
PCK1
GNA14
NPIPB3
CEP126
ANGPTL5
SRI
POLR2J3
IRF2BP2
SORL1
ZNF91
RNF24
CELA3B
BTNL3
MMACHC
METTL25
CCDC59
GGT1
CRLF3
OIP5
NUSAP1
MINDY3
FUT2
CMTM1
UTP3
AMOTL2
PPP1R3A
TBC1D30
TAPT1
NEBL
LMO7
CDC14B
FURIN
ZNF552
RTN4
TGIF1
TCN2
HPGD
LENG9
FBN2
YWHAZ
NSRP1
SERP2
FARSB
TMEM60
PHTF2
HSP90B1
CCNJL
MS4A18
B4GALT6
DNMBP
MED13
CLGN
CACHD1
ANXA11
JMJD1C
SPINK1
EPHX2
PRPF19
GALNT1
FOXJ3
SMCHD1
RABEPK
FNBP4
GALK1
CRYBG1
NR6A1
UCK1
PRKAB2
ZHX3
UEVLD
PTPRB
MADD
SLC22A2
ZKSCAN1
ZSWIM5
USP6NL
LRRC4
TOE1
TCF12
MUTYH
FGF1
ETFBKMT
ZNF501
ZCCHC8
CAMK2G
NRAS
CDCA8
C1orf109
BCL10
GPR171
PLA2G6
NAA60
KNL1
KLF5
YAE1
TAOK3
SMTN
TUBG2
PRDX6
LGALS4
CTTNBP2NL
BCL9
RIC8B
PTPRR
PIK3AP1
LUC7L3
CHKA
ADGRG1
GSDMA
BAHCC1
LNX1
EBAG9
CDX2
BARX2
HHLA2
HMOX1
GTPBP4
NPIPB5
KIF26B
SRP9
CACNB2
TPCN1
TSHZ1
SHH
THAP1
OGFOD2
NHSL1
RDH11
TRIB1
SMC2
MARK2
ACCS
STARD3
PPP1R1B
NDE1
MARF1
DEPDC7
CGGBP1
C3orf38
NUAK2
PRR5L
MYH4
MBTPS2
GOLPH3
ELAPOR2
EIF3F
BRCA1
GLRA2
TUBAL3
CFAP69
BCAP29
PPFIBP2
KLC1
IFIT1B
NPAS4
LRATD1
SLC11A2
WWC3
TMEM205
RAB3D
FGG
CCDC159
UGT1A8
FOXP1
TPX2
DSC2
RP1L1
RASSF10
ARHGEF38
STYXL2
RNF31
PSME2
GPA33
EMC9
BATF
FNIP2
FAM135A
PSMD3
TDGF1
CEP120
RHOBTB2
MAPRE3
OR9Q1
ADGB
WASHC3
TAPBPL
C1QTNF1
VOPP1
DNPEP
CALB1
SYNE3
SLC14A2
PDCD6IP
NOS1AP
NFIX
KCTD5
UBXN1
FRA10AC1
TJP2
PPIL1
MMP10
MBIP
MAB21L4
C6orf89
RGS8
HAND1
CBFA2T2
UGT2B17
SMIM14
LDHA
FBXO32
STK31
KAZN
TMEM114
CPS1
WEE2
DENND11
PREPL
IBTK
CAMKMT
HEXIM2
PIK3CA
PHACTR4
KHSRP
CTXN3
TINAG
TEFM
SUSD1
SH3TC2
LPIN1
ELP3
TM9SF3
TM2D2
SGO2
RAPGEFL1
MYO7B
ADAM9
ZNF282
SCNN1A
MUC20
LTBR
ARHGEF28
VIPAS39
NEURL1B
ASB2
AHSA1
TSPAN12
MELTF
ZBTB38
IQCF1
ARL14
URGCP
FAM114A1
EHF
ARID5B
SYTL2
MTUS1
VWA2
DAGLB
CFL1
SLC26A2
PIWIL1
TMEM171
NPSR1
DGKD
LRRC10B
COG3
TFDP2
PIH1D1
ECT2
CDCA7
ALDH16A1
UGT2B7
TTLL6
RAB5B
PYGB
TMEM170A
FRMD3
VANGL1
CYP3A4
XDH
TDP2
ACOT13
ZNF512B
SNX17
MRO
EIF2B4
MAP3K13
H4C11
ZNF577
MYL6B
KIAA1549L
CLCN3
RPS6KA1
ZGPAT
ARFRP1
ZNF384
CSNK1E
NR1D1
MRPS16
IGFL2
HOOK1
HEPHL1
DDX41
PHF8
SMG1
SLC25A45
SHF
FRMD8
COX19
C1orf105
OAF
ETHE1
ETFA
BCAR3
ZBTB7C
SDF4
CASD1
B3GALT6
SMIM31
DKK3
INSIG2
GJB4
SPRING1
RNFT2
PKIB
NOX1
AKTIP
STPG1
NIPAL3
S100A16
RASGRF2
EIF2AK2
DAGLA
ANTXR2
BUD13
ENKUR
SH3BP4
HSBP1L1
AMHR2
AKR1E2
ITGA2
VPS37D
KBTBD8
CORO1A
NEK3
HAL
TMEM89
EMP1
CALR3
C19orf44
NCAPD2
MRPL51
PDXDC1
HINT1
ELF3
RPL38
NCOA4
FAM193B
UBAP2L
SYMPK
RHCG
FOXA3
DLL3
C1orf43
ACSF2
HOXB9
BTBD3
TRMT1
RTTN
PLXNC1
NACC1
B3GNT3
STAT6
RUBCNL
PHKG2
CBLB
ARIH1
TFIP11
CNBP
UBE2J1
TCIM
NR5A2
KRT6B
CFAP45
ANK3
TEP1
MRPL53
ZC3H15
GTF2IRD1
SLC35B4
MINPP1
ERGIC1
PPARGC1A
DLX4
AGFG1
ZFAND6
SMUG1
TM7SF3
NEK7
YWHAB
RNF7
PKP4
CCDC148
C4orf36
SIT1
POLD4
CLSTN1
LEKR1
KCNQ1
IDH1
G3BP2
CAAP1
ZSWIM3
HOXC8
ARMH3
ACOT8
TRMT61B
PMVK
PADI3
ICA1
TFEC
GOLGB1