ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RUNX3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◣ RUNX3: Average

◢ SRX190349: GM12878

◢ RUNX3: STRING

TM4SF4
GLDN
IFNA21
SPATA4
TEX12
IL18
BCO2
EFHB
MGP
SLC4A4
EXD2
DAZL
UTRN
STS
S100A10
EGFLAM
TMEM212
KLRG1
ZNF541
TESC
PKP2
UBE2E1
ABHD12B
WDR24
STUB1
JMJD8
TMEM232
MRPS14
ANK2
POLR3B
NCOA1
CD28
VTI1B
ITK
FAM71B
TAS2R50
TTC5
TBX19
BTRC
LAMC1
NPIPB11
DCP1B
CLNS1A
CPEB3
PCMT1
USPL1
MYOM3
HMGB1
SMARCAL1
FAM177B
USP48
CRTAM
IL1RL1
CCDC124
HPSE2
CD1A
METTL25
CCDC59
PLK1
NUF2
CDKAL1
PIP4K2C
RAD52
TSHR
ACTA1
FAM160A1
RNF138
BMP5
ZNF175
DUSP6
GNG7
EIF1B
FCHSD1
PARP15
USP30
SLC37A3
SH3RF2
ZBTB20
RSPO4
LRRC31
CCDC138
STAP1
VTA1
NMBR
ZNF80
DAG1
SBF2
ADM
FAM8A1
CLUAP1
LEFTY1
CCDC130
GTF2A2
PIGK
TMEM115
NPRL2
CYB561D2
TBL1X
SHISA4
TM9SF1
IPO4
SNX9
MED23
LAMC2
STBD1
PLCB1
MED7
PLAT
MRPL16
RNF144A
PIP4K2A
TNK2
CCDC9
MORC3
KIF13A
DYNC1I2
MRPS23
CAST
UCP3
YTHDC2
ITM2B
CLECL1
PCDH1
NUP133
NPIPB8
SUGCT
RORA
MPLKIP
NUFIP1
GPALPP1
APBB1
DZIP3
CIP2A
DSG3
CHCHD3
CLDN12
SIGLEC5
THUMPD3
ARHGEF12
TARS3
SYNE1
EPHB4
COMMD1
PPFIBP2
KRR1
HMCES
EVI5
PLCXD2
ADAP1
FRMPD4
CD36
CRK
ABCD3
CUEDC1
SNAP29
PI4KA
SAV1
OST4
KHK
EMILIN1
TADA1
RNF135
PLEKHA1
FCGBP
ZNF529
RTL3
COA6
C4BPB
NCBP3
COPS4
EPYC
LIPH
ALOX5AP
TMEM92
HYLS1
ASIP
PLSCR2
DLG1
C3orf86
ZSCAN31
ZKSCAN3
SYCP2L
RGS1
GCM2
SLC2A8
CTSS
MFF
THAP10
LRRC49
HEXB
RILPL1
SYCP3
GPR141
SORBS1
LRRC29
CHUK
NPAS4
MMS22L
ANKS6
AMPD3
NDUFB8
HIF1AN
SIRT4
WDCP
KCNJ15
FKBP1B
APP
PROSER3
LIN37
HSPB6
CCDC110
ATP1A1
MNX1
TP63
WWTR1
MAP3K13
CLEC7A
SPTLC3
PIK3CG
BTN3A3
TRIM40
NRAP
SLC1A6
JMY
CAMK1
RSPH9
MAD2L1BP
GTPBP2
GSPT1
LRRC47
ZBED9
GCNT1
CATSPER2
SAP18
PPP1R12A
NCKAP1
ACVR2A
ZDHHC18
RSPH6A
GNPDA1
MCTP1
COMMD3-BMI1
COMMD3
ZMYM4
DCDC2
GPN1
CCDC121
WBP2
FBXO7
TMPPE
GLB1
AGK
VPS41
SERPINE3
EMB
RGL4
LIPM
NPIPB5
NPIPB6
NOL4L
ACSL6
TEX9
ATP23
DSTYK
CHSY1
OXR1
ZNF831
LGALS8
ITGAX
RNF149
KLRD1
NPIPB9
MYO1F
GHRL
PSMC2
DNAJC2
CRLS1
CSTF2T
ATP1A4
TMBIM4
SC5D
MCTP2
MB
SNAPC3
DHX8
USP22
SLC12A4
MMP9
DPEP3
LYPD5
KCNN4
PIP5KL1
DPM2
PLEKHG1
FILIP1L
CXCL8
ZNF436
SLFN12L
NSUN6
ARL5B
COX16
C7orf33
EXPH5
AIPL1
CD55
SPINK1
DEF6
TASL
NLK
KIAA0895L
EXOC3L1
ELMO3
E2F4
PRKCI
LRRTM3
HOPX
SNX12
HELZ2
OLIG1
UBC
SPATA12
SNTB2
PLBD1
ARHGEF3
TTC28
TASOR
LMO7
ARHGAP15
PLVAP
GTF2B
CCR1
NPIPB12
SUN1
SIM1
CMTM6
CCDC113
ZNF705E
DEFB108B
ATP6AP2
SLC24A1
C2orf83
SPTAN1
CFAP54
VSIG4
RANBP6
KIAA2026
ZNF500
BRPF3
AFF3
PAFAH2
DNAH10
BID
TMEM267
PCOLCE
NID1
MOSPD3
GPR18
GABRQ
PDSS2
GLDC
RIN1
NPIPB4
HNRNPA1L2
GRAP2
ENTHD1
BRMS1
NOS1AP
ZNF230
UTP3
WWOX
C12orf42
UBASH3A
TMPRSS3
PCOTH
MIPEP
FUCA1
C1QTNF9B
ZCCHC14
PSTPIP1
ACTR6
ZNF784
TCF4
FGL2
TACSTD2
STARD4
NR3C1
MLX
HSD17B1
COASY
CLDN11
TRIP11
IL17RA
GFOD2
CREB5
H4C4
H3C4
H2BC6
DMXL1
ZNF770
GMEB2
CA13
ZNF518A
TJP1
RCAN1
PNPLA5
EPHB2
SEMA4B
IFNA5
TSGA10
MESP1
MRPS22
WDR81
KBTBD6
CASP8AP2
VPS72
TTC26
PIP5K1A
BANK1
PTK2
CRYBB1
SMIM11B
SMIM11A
RNF170
HOOK3
SDSL
PRDM10
WAS
NCOA7
DNAJC5B
TMCC3
GTSE1
FAM184A
ELAVL3
MAL2
GOLM1
TMEM53
OR8D4
GCDH
ARMH1
TP53TG5
SYS1
BCLAF3
NET1
SMYD4
RPA1
CDCA7L
TPM1
TNFAIP8L2-SCNM1
TNFAIP8L2
SLC26A11
SCNM1
NEGR1
LYSMD1
GPR155
DEF8
MRTFA
GTPBP10
SLC12A3
COL3A1
SEPTIN2
HDLBP
GPR65
ARL6IP1
MRPS18C
HELQ
H1-2
THAP12
GVQW3
ASAH2
PGAP1
SRM
CDK2AP1
TOMM40L
NPIPB13
GPATCH2
FCER1G
APOA2
RAD18
RFFL
PRR5
GTF2I
FRA10AC1
TNKS
LRRC59
LRCH1
DAZAP2
CSDE1
KLHL20
ARL14EP
BLVRA
UBR2
RTP3
PLD4
LTF
FOXO6
HKDC1
MIA3
APOOL
CD101
ANXA1
UTS2B
SHQ1
CCDC50
TNIP3
KDM3A
ERBB2
RGS14
MIGA1
LMAN2
EHF
JAML
BRD3
ZNF350
ILF3
ZNF430
ZNF397
TTC21B
PDGFB
VPS29
RAD9B
GLCCI1
ELOF1
CDC42EP1
ACP5
TTC21A
RFX1
GORASP1
CANT1
OAZ1
JSRP1
TBL1XR1
OR4D11
IL23R
ANKRD13C
TTC33
THAP11
METTL15
KIF18A
ERO1A
NME7
GNPTAB
FZR1
DOHH
CHFR
BLZF1
ABCB1
PANK1
NBPF15
MS4A6A
ACTA2
SPOP
TIGIT
NCAPH
KCTD4
ZNF302
WDR47
SACS
R3HDM2
PIGX
NUPR2
NUGGC
LY9
LARS1
ELP3
CHCHD2
CEP19
DMWD
DMPK
KDM8
ZKSCAN4
TPR
ODR4
NKAPL
CLN3
APOBR
AARS2
MRPL1
EIF2B5
CNTRL
CCR2
TRIAP1
ENPP2
COX6A1
NDUFV1
MGAT5
CNR1
ATP12A
TFPT
PRPF31
ENPP5
MEGF8
KLRK1
HEXA
CYP51A1
C5orf34
DDHD1
BRIX1
WFS1
METTL9
LARGE1
UQCRC2
FAM126A
ADA
RPA3
ATP5MC2
SAXO1
RRAGA
TSNARE1
HEATR5B
GPATCH11
AKAP9
PPM1M
CNTN1
CATSPER4
ZNF19
VPS26B
NCAPD3
ARIH2
TSPAN17
PRPF40B
LIMS1
TSACC
PEX12
NAT10
INAVA
FASLG
CCT3
CAND1
BTN3A2
AP2B1
NSFL1C
LONP2
GGNBP2
EVC2
EVC
COMMD2
ABCC11
SUSD3
KLF7
C1orf127
CTTN
SLC31A1
PRSS22
FKBP15
PTDSS2
FAF2
CRNKL1
CFAP61
TFAM
MED31
C17orf100
ADAM22
H6PD
CCDC180
SORT1
CORO2B
ZNF501
SIRT1
RNF139
REXO2
NT5C1A
MARS2
IFT140
CRAMP1
TRIP4
RPL11
PCLAF
IL1RN
TUBG1
TFF3
SAA4
SAA2-SAA4
SAA2
RETREG3
PPP1R1C
RPS8
NSUN3
NPY
NOXA1
EFNA4
DHFR2
NBEAL2
DRAP1
CCDC12
C11orf68
ZNF791
ZNF490
TMTC2
INTS10
CCL15
CASP8
ZBTB45
SLC27A5
BCL11A
IPCEF1
LTA4H
PSMC3IP
ZSWIM6
PLEKHA6
MTDH
NDUFS6
MRPL36
IVD
C12orf65
SURF6
SLC5A1
SIKE1
HCLS1
RAB3GAP1
COX6C
TMEM252
CHRNA1
CCIN
BAZ2A
ATP5F1B
P2RY14
LGALS2
PCYT1A
AUTS2
RAB38
ZNF600
SLC17A1
IL33
CFAP20
WHAMM
LONRF1
FSD2
CALM3
SLCO3A1
SEC22B
RIN3
PIGC
LAMB4
HECTD1
C1orf105
SPDYE13
HNRNPF
FOXJ3
USH1G
SFXN5
PHF20
OTOP2
MIOS
FBXO8
COPZ1
CEP44
SDE2
RNF187
LRRIQ4
LRRC34
ZMYND12
TBL3
RPS2
RNF151
PPCS
NR4A1
NOXO1
GHRH
GDPD5
CYP26A1
CCDC30
TMCO2
SEMA4D
FCRL4
TMEM39A
POGLUT1
THAP9
SEC31A
SLC37A1
RSPH1
P2RX5
NPIPB3
COL16A1
STAU1
TANK
UNC45B
RPL36
NLE1
MICOS13
HSD11B1L
H4C3
H1-6
CCDC146
SLC38A9
RNF111
REEP5
RBBP5
DPY19L4
ULBP2
TOX2
EIF2B2
RANBP9
UBQLN4
TAPT1
RAB25
LAMTOR2
ZBTB33
PYDC5
NEURL3
IFNA6
IFNA13
IFI16
HLA-DOA
RASSF5
LIN54
TTLL12
CCR5
ZNF563
XPC
TMEM229B
LSM3
DDX27
TTC30B
SSH1
EGR2
ARHGAP30
ADO
ABHD2
CDH1
SDAD1
PTPN22
NSF
TTC7A
MCFD2
CDADC1
NTN5
CD2BP2
TPH2
HEBP2
STK11IP
KIF21B
INTS12
GSTCD
COPS8
LILRA4
IL18BP
CBLL1
SERINC2
RERE
POLR2C
ESYT2
DOCK10
THOC1
KLHDC4
APTX
RCC1L
CDYL
ZNRF1
MDM4
OGG1
LAMA3
CBLC
FBXO17
CARD8
TTC39C
SPECC1
OCSTAMP
ZNRF3
MTHFD2
GREM1
ATP2C1
TPCN2
MYO18B
RHEBL1
PRDM1
KMT2D
C2orf42
ZFPL1
TMEM262
SENP7
NEIL1
MS4A15
CDCA5
CLIC3
PIGL
NCOR1
LOC645177
DYNLRB2
DYNC2LI1
C12orf77
RNF157
IGSF6
CHPF2
ABCF2-H2BE1
ABCF2
ZNF718
ZNF595
RAB4B
MIA
GTF2F2
EXOSC9
DUSP1
DNAI2
UBE2A
CXorf56
ADD1
TM2D1
LARGE2
ZFYVE28
TIMM17A
MEF2A
LMOD1
CFAP99
TARS2
RNF19B
PSENEN
IGFLR1
ADSL
SPTY2D1
RABGAP1L
MS4A14
C11orf24
G0S2
CD40
TAGAP
CYBRD1
ASAP1
PTH2
MTM1
MACROD2
GFY
CBR4
CDC42EP5
RRM2B
MZF1
MAN2A1
GPR171
PLAAT2
C12orf43
TBC1D25
MCC
GPR174
ARHGAP35
AP2S1
KIAA1217
GRAMD4
GPR35
DDX60
YIPF2
TIMM29
PDXK
LDLRAD4
CD209
BCL2L11
LILRB1
FXR1
ECI1
C4orf47
SPATA6L
PLPP6
KCNE2
UTP11
FHL3
FFAR2
CTLA4
CSNK1G3
ZBP1
DNAH8
TSG101
C2CD2
UPP1
MRPL21
ITGB3BP
IGHMBP2
HAND1
FOXN3
EFCAB7
CCM2
ALOX15
ZNF148
PSIP1
MAFF
HSBP1L1
HSPA5
SBF1
LMO2
CEP85L
UBL5
TPCN1
TENT4B
RIPK3
PIN1
LRP5L
IQCD
FCAMR
FBXL12
ADCY4
ZFP3
PPP1R21
GTF2H3
EIF2B1
LATS1
ITGB1
DNAJC18
PKM
RAD54B
NLRX1
MRRF
FSBP
DYNC2H1