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About This Database

Soybean protein data (gel-free)

Data description
Data name
Soybean protein data (gel-free)
DOI
10.18908/lsdba.nbdc00238-004
Description of data contents
Soybean protein data collected from samples in different organs, flood conditions and time course, and measured with mass spectrometer.
Data file
File name :
soybean_free_proteomics_info.zip
File URL :
File size :
1.8 MB
Simple search URL
https://togodb.biosciencedbc.jp/togodb/view/soybean_gelfree_proteomics_info#en
Data acquisition method

Measurement with mass spectrometer

Data analysis method

-

Number of data entries

39,212 entries

Data detail
Data item Description
Accession (Soybean)

Protein accession number in soybean

Accession (Arabidopsis)

Protein accession number in arabidopsis

Description

Description of the protein

Stage

Soybean development stage ("Seed" or days after sowing)

Organ

Organ of soybean

Organelle

Organelle of soybean

Stress

Condition of flood stress

Mass

Protein molecular weight measured by mass spectrometer

Protein content (mol %)

Protein molar concentration in the sample

emPAI

Protein emPAI concentration in the sample

Peptides

Number of peptides in the sample which match the protein

Score

Matching score about the above