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About This Database

tRNA

Data description
Data name
tRNA
DOI
10.18908/lsdba.nbdc00193-006
Description of data contents
Data contents are as follows: <ul> <li>Amino acid sequences of 23 tRNA from 17 species identified in the rice mitochondrial genome.</li> <li>List of genes in rice, Arabidopsis and sugar beet mitochondrial genomes and their existence in mitochondrial genomes of other plants.</li> </ul>
Data file
File name :
rmg_trna.zip
File URL :
File size :
1 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/rmg_trna#en
Data acquisition method

"Entire Sequence" data in this database

Data analysis method

-

Number of data entries

21 entries

Data detail
Data item Description
Amino acids

Amino acid binding to tRNA

tRNA

tRNA gene indicated by the cognate amino acid in one-letter code

rice

Rice
+: tRNA present-: tRNA absenty: pseudogenea: mitochondrial tRNAb: plastid-like tRNA
Miyata et al. (1998) was used as reference for rice trnP and trnR pseudogenes.

Arabidopsis

Arabidopsis
+: tRNA present-: tRNA absenty: pseudogenea: mitochondrial tRNAb: plastid-like tRNA
Reference: Unseld et al. (1997)

sugarbeet

Sugar beet
+: tRNA present-: tRNA absenty: pseudogenea: mitochondrial tRNAb: plastid-like tRNAc: novel tRNA
Reference: Kubo et al. (2000b)