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Life Science Database Archive
RMG

Plastid-like Seq in mt Genome

Data detail

info Data name Plastid-like Seq in mt Genome
info DOI 
info Description of data contents 

List of characteristic features of DNA fragments that were migrated from the plastid genome to the mitochondrial genome. Information on sizes, positions, gene names, homologies and differences for individual fragments is available.

info Data file 
File name:
rmg_plastid_like_seq.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/rmg/LATEST/rmg_plastid_like_seq.zip
File size:
2 KB
info Simple search URL 
info Data acquisition method 

"Entire Sequence" data in this database

info Data analysis method -
info Number of data entries 

18 entries

Data itemDescription
Fragment no. Fragment number
Position in mtDNA Position in the mitochondrial DNA sequence
Fragment size(nt) Size of the fragment
Position in ptDNA Position in the plastid DNA sequence

(The position is based on Hiratsuka et al. (1989))
Genes Genes
Substitution Number of substitutions in the plastid DNA sequence
Deletion Number of nucleotide deletions in the plastid DNA sequence

(Number of deletion sites is shown in parentheses)
Insertion Number of nucleotide insertions in the plastid DNA sequence

(Number of insertion sites is shown in parentheses)
Homology(%) Percentage homology to the rice plastid DNA sequence