[Credits]

Life Science Database Archive
RED

Database Description

General information of database

info Database name RED
info Alternative name Rice Expression Database
info DOI 
info Creator 
Creator Name:
Shoshi Kikuchi
Creator Affiliation:
National Institute of Agrobiological Sciences
Journal Search:
info Contact address 

2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan

National Institute of Agrobiological Sciences

Plant Genome Research Unit
Shoshi Kikuchi

E-mail : red address

info Database classification Plant databases - Rice
info Database classification Microarray, Gene Expression
info Organism 
Taxonomy Name:
Oryza sativa
Taxonomy ID:
info Database description 

The Rice Expression Database (RED) is a database that aggregates the gene expression data that has been analyzed using 8987EST array in the Microarray Project that was underway as part of the Rice Genome Project. RED holds raw and normalized data from expression profiles obtained by the Rice Microarray Project and other research groups.

info Features and manner of utilization of database 

If you are interested in a particular research subject, can find the appropriate "Research ID" from the red_subject_info table. You will then get the experimental data for the selected research.
Also, you can find the Accession number for a particular gene from the red_est table. Then, you will then get expression profiles under various experimental conditions against results of Array-BLAST.

info License CC BY-SA Detail
info Background and funding 
Name:
Analysis of gene functions in the rice genome by using the gene expression monitoring technique (commonly called as "the Microarray project") (1999-2003)
info Reference(s) 
Article title:
Rice Expression Database: the gateway to rice functional genomics
Author name(s):
Junshi Yazaki, Naoki Kishimoto, Masahiro Ishikawa and Shoshi Kikuchi
Journal:
Trends in Plant Science (2002) Dec 7 (12):563-564
External Links:
 

Original website information

info Database maintenance site 

info URL of the original website (Closed) http://red.dna.affrc.go.jp/RED/
info Operation start date 2000/10/1
info Last update date -
info URL of the portal site 
info Whole data download -
info Referenced database 

DDBJ

info Entry list Available
info Query search Available
info Web services Not available
info URL of Web services -
info Need for user registration Not available