About This Database

EST data

Data description

Data name

EST data

DOI

Description of data contents

Position information of the clone of Rice8987 Array on chromosomes.  

Data file

File name :

red_est.zip

File URL :

File size :

629 KB

Simple search URL

Data acquisition method

Data analysis method

Number of data entries

9,216 entries

Data detail

Data item	Description
Element No(Glass)	Element number (spotted position on the glass)
Clone name	Clone name
Accession_01	DDBJ accession number (5')
Accession_02	DDBJ accession number (3')
Locus name	Locus name
Chr type	Chromosome number
EST cluster type	Cluster type of EST "D" : Mapping the clone sequences directly into the genome. "G" : Mapping a representative clone sequences of similar sequences group into the genome.
Availability	Availability "true" : Available "false" : Not available
3'UTR M /no check	PCR products check (3'UTR) "blank" : result match to the prediction "no" : no band "m" : multiband
Full insert M /no check	PCR products check (Full inserts) "blank" : Result match to the prediction "no" : no band "m" : multiband
Destination Plate	Destination Plate number, which used for PCR check of the clone
Dplate Pos	Posision on the Destination Plate used for PCR check of the clone
Mapped 3'UTR Primer seq (Upper)	Mapped 3'UTR Primer sequence (Upper)
Mapped 3'UTR Primer seq (Lower)	Mapped 3'UTR Primer sequence (Lower)
Unmapped 3'UTR Primer seq (Upper)	Unmapped 3'UTR Primer sequence (Upper)
Unmapped 3'UTR Primer seq (Lower)	Unmapped 3'UTR Primer sequence (Lower)
Putative Identification	Putative Gene Identification