[ Japanese | English ]
About This Database

Protein (Cyanobacteria)

Data description
Data name
Protein (Cyanobacteria)
DOI
10.18908/lsdba.nbdc01194-02-004.V002
Description of data contents
Amino acid sequences of Cyanobacteria (blue-green algae) obtained from the NCBI Reference Sequence Database with the NCBI GI numbers, the Reference Sequence IDs, and annotations. The IDs of clusters that the amino acid sequences belong to in each taxon are indicated.
Data file
File name :
pgdbj_ortholog_db_cyanobacteria_protein.zip
File URL :
File size :
106 MB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/pgdbj_ortholog_db_cyanobacteria_protein
Data acquisition method

Amino acid sequences obtained from the NCBI Reference Sequence Database.

Data analysis method

Organisms that have equal to or greater than 500 amino acid sequences in the NCBI Reference Sequence Database were included.

Number of data entries

797,587 entries

Data detail
Data item Description
GI number

NCBI GI number of Amino Acid sequence

RefSeq ID

NCBI Reference Sequence ID

Chr

Chromosome number or genomic ID

Start Position

Start Position

Stop Position

Stop Position

Cluster (Phylum)

Cluster ID (rank: Phylum)

Cluster (Class)

Cluster ID (rank: Class)

Cluster (Order)

Cluster ID (rank: Order)

Cluster (No rank 1)

Cluster ID (rank: No rank 1)

Cluster (Family)

Cluster ID (rank: Family)

Cluster (Genus)

Cluster ID (rank: Genus)

Cluster (No rank 2)

Cluster ID (rank: No rank 2)

Cluster (Species)

Cluster ID (rank: Species)

Cluster (No rank 3)

Cluster ID (rank: No rank 3)

Cluster (Subspecies)

Cluster ID (rank: Subspecies)

Cluster (No rank 4)

Cluster ID (rank: No rank 4)

Annotation

Annotation of protein

Organism

Organism

AA sequence

Amino acid sequence