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Life Science Database Archive
KOME

Mapping Pseudomolecule data

Data detail

info Data name Mapping Pseudomolecule data
info DOI 
info Description of data contents 

Mapping information with the TIGR japonica Pseudomolecules

info Data file 
File name:
kome_mapping_pseudomolecule_data.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/kome/LATEST/kome_mapping_pseudomolecule_data.zip
File size:
719 KB
info Simple search URL 
info Data acquisition method -
info Data analysis method 

Mapped the full-length cDNA clones to the TIGR japonica Pseudomolecules.

info Number of data entries 

30,892 entries

Data itemDescription
ACCESSION_NO Accession number of the full-length cDNA clone
CLONE_NAME Name of the full-length cDNA clone
HIT_NUMBER Number of the sites where the cDNA clones were mapped
PSEUDOMOLECULE Name of the mapped pseudomolecule
CHROMOSOME Chromosome number of the mapped pseudomolecule
CHR_START_POS Alignment start position on the mapped pseudomolecule
CHR_END_POS Alignment end position on the mapped pseudomolecule
CDNA_START_POS Alignment start position on the mapped cDNA clone
CDNA_END_POS Alignment end position on the mapped cDNA clone
STRAND Strand direction of the mapped cDNA clone
TU_ID ID of the mapped TU (Transcriptional Unit)