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Life Science Database Archive
KOME

InterPro search result

Data detail

info Data name InterPro search result
info DOI 
info Description of data contents 

Results of motif searches against the InterPro database

info Data file 
File name:
kome_interpro_search_result.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/kome/LATEST/kome_interpro_search_result.zip
File size:
2.1 MB
info Simple search URL 
info Data acquisition method 

InterPro release 8.0 was used for the searches.

info Data analysis method 

Performed motif searches against the InterPro database.
The following 9 programs were used to find motifs.
BlastProDom
FPrintScan
HMMPfam
HMMPIR
HMMSmart
HMMTigr
ProfileScan
ScanRegExp
SuperFamily

info Number of data entries 

110,589 entries

Data itemDescription
ACCESSION_NO Accession number of the full-length cDNA clone
CLONE_NAME Name of the full-length cDNA clone
INTERPRO_ID ID of the motif in the InterPro database
INTERPRO_NAME Name of the motif in the InterPro database
METHOD Motif search program
ACCESSION_ID Accession number of the motif
SHORT_NAME Short name of the motif
LOCATION Location of the motif
EXPECT Expect value in the search result