[ Japanese | English ]
About This Database

Product annotations

Data description
Data name
Product annotations
DOI
10.18908/lsdba.nbdc00120-010
Description of data contents
Extracted the hits related to protein gene products or protein functions from GenBank blastn/blastx results.
Data file
File name :
kome_product_annotation.zip
File URL :
File size :
815 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/kome_product_annotation#en
Data acquisition method

Performed blastn searches against Genbank nucleotide sequences and blastx searches against Genbank amino acid sequences.

Data analysis method

Showing the entries related to protein gene products or protein functions in GenBank blastn/blastx results.
"Related to protein gene products or protein functions" is defined as follows:
The word "mRNA", "Protein" or "Gene" is included in the entry.

Number of data entries

24,184 entries

Data detail
Data item Description
ACCESSION_NO

Accession number of the full-length cDNA clone

CLONE_NAME

Name of the full-length cDNA clone

BLAST_TYPE

Type of BLAST program (blastn or blastx)

HIT_ACCESSION

Accession number of the GenBank entry

DIVISION

GenBank division

DEFINITION

Definition of the GenBank clone

RANK

Ranking in the blast search result

SCORE

Score in the blast search result

EXPECT

Expect value in the blast search result