Search for Database Metadata
| Database name ⇅ | DOI ⇅ | Database classification ⇅ | Organism ⇅ | Database description ⇅ | Features and manner of utilization of database ⇅ | Database maintenance site ⇅ | License ⇅ |
|---|---|---|---|---|---|---|---|
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PoSSuM
(Pocket Similarity Search using Multiple-Sketches) |
10.18908/lsdba.nbdc01144-000 |
Structure Databases - Small molecules
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PoSSuM is a database for detecting similar small-molecule binding sites on proteins. We have provided a service named PoSSuM drug search, in which we selected 194 approved drug compounds retrieved from ChEMBL, and detected their known binding pockets and pockets that are similar to them. |
CC BY-SA | |||
| First Author's |
Literature
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Open access and online review articles written by Japanese authors who published their research outcomes in some top journals such as Science and Nature. |
CC BY | ||||
| Leading Author's |
Literature
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Open access and online review articles written by Japanese authors who lead several biological research areas. |
CC BY | ||||
| Mouse Basement Membrane Bodymap | 10.18908/lsdba.nbdc00574-000 |
Protein sequence databases - Protein localization and targeting
画像データベース
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Mus musculus
(10090)
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This is a database of body-wide localizations of basement membrane proteins in developing mouse embryos. The database consists of hundreds of high resolution virtual slides created from gigapixel digital images representing immunohistochemically stained whole mouse sagittal and head frontal sections and hematoxylin/eosin stained adjacent sections. |
This database provides immunohistochemically stained virtual slides in which visitors can observe and compare expression patterns of 42 different ECM proteins in the interesting developing organs on the same platform with hematoxylin/eosin stained adjacent slides. |
CC BY-SA | |
| Nikkaji-InChI Mapping Table | 10.18908/lsdba.nbdc01530-01-001.V004 |
Chemical Database
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This is mapping data of Nikkaji Number (chemical substances identifier), InChI, and InChIKey in Nikkaji (http://doi.org/10.15079/NIKKAJI) which is one of the largest chemical substances database in Japan. |
InChI which was developed by IUPAC (International Union of Pure and Applied Chemistry) and NIST (National Institute of Standards and Technology) is a non-proprietary identifier for chemical substances. The InChIKey is a hashed version of the full InChI. Mapping between chemical database IDs may become easy by using InChI (InChIKey). |
CC BY | ||
| Database name | DOI | Database classification | Organism | Database description | Features and manner of utilization of database | Database maintenance site | License |