ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX873813 | Keratinocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◣ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

KIF5C
RGPD2
RGPD1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
COL23A1
SNAPC1
MTRNR2L1
LOC102724770
DGCR6
MTRNR2L9
GTPBP6
DUX4
SPAAR
HRCT1
CNOT3
PTPRN2
MTRNR2L10
SLC35E2B
AFAP1
EMILIN2
MVK
SLC35E2A
MAMDC2
FRG2C
TLE3
FRG2
EPN1
MTRNR2L6
PDE4A
TAOK3
SUDS3
ZNF300
MUC3A
CDON
RPL9
LIAS
UCKL1
FAM71E1
EMC10
LGR6
HDAC2
USP17L8
USP17L3
NPDC1
ENTPD2
BZW2
ANKMY2
TSNAXIP1
RANBP10
RANBP2
TARDBP
C1orf198
KIFC2
CYHR1
ADAMTS9
ATXN2L
SCGB1C2
CRYAA
CRYAA2
RBM23
CCDC200
DRD4
SP2
FAM187A
EFTUD2
CCDC103
GTF3C5
FUS
OPRL1
EED
FOXJ3
VPS37B
COMMD1
CCT4
HOMER1
PHRF1
OPA3
UQCRC2
PSMD1
FOLR1
FAM53C
CDC25C
EAPP
RALGAPA1
UFSP2
C4orf47
PAK1
TMEM260
HES4
STK19
DXO
OXSR1
PDXDC1
YY1AP1
DAP3
WRAP53
TP53
PPP5D1
CALM3
CMC2
CENPN
PIP4P1
OSGEP
APEX1
TMEM259
CNN2
PIK3R3
STK38L
JOSD2
ASPDH
SMC2
EIF3B
DCTN1
CFAP45
ATP1B3
RBKS
BABAM2
ZNF547
TRAPPC2B
ULBP2
RFX1
ELL2
ZNF576
IRGQ
RPL35A
IQCG
NUP205
NVL
POLR3F
DZANK1
C19orf48
FRAT1
GNB2
PNO1
C6orf62
GIT2
ANKRD13A
FLCN
OGA
PSIP1
NPAS4
TSPAN31
CDK4
AGAP2
GOSR2
ICE1
HADHB
HADHA
RHBDD3
EWSR1
ATP5MG
ZBTB21
HECA
NOL8
CENPP
TIMM22
UROS
BCCIP
TCP11L2
UBB
MRPL23
TMED1
HINT3
STX4
FEM1A
TMUB2
TBCK
AIMP1
FAM227A
CBY1
TRMO
IQCH
AAGAB
RPS23
ATP6AP1L
UPF2
CSNK2A1
ACBD4
PLCD3
FBXO48
APLF
GBA
EIF4A3
TAF15
ZRANB2
SLC35B1
CACTIN
REN
PFDN4
PTDSS1
MTERF3
NUP85
PRMT1
SELENOW
STAM
GARS1
STK35
USP36
TPBG
CENPE
RPL21
KCNJ15
RAB11B
SOST
IPO13
PKNOX1
DHX8
GRIPAP1
C21orf91
PMVK
FOS
ULK4
DNMT1
RPL19
CACNB1
ING3
PDAP1
BUD31
TBC1D17
AKT1S1
MRFAP1
LRPPRC
UBE2B
CDKL3
OLFML2A
NR6A1
PRKCI
BRAF
CDIPT
PFDN2
NIT1
CD24
SS18
SRI
MTMR14
BCL6
TSNAX
DHX36
NDUFA4
C6orf47
BAG6
APOM
RRNAD1
ISG20L2
BCAS2
WFIKKN1
METTL26
OR1F1
NCOA7
POLR3E
PRMT5
HGC6.3
PGK1
SACM1L
MPZL1
NPR1
ILF2
H4C8
C8orf37
TNFSF13B
LTA4H
CTDP1
PSMA3
TIA1
PCYOX1
ZNF839
GET4
LUC7L2
BRMS1
B4GAT1
OR2B2
H2BC17
H2AC17
BCAR3
PPP6R3
HSPA6
RNASE4
ANG
POLG
SHF
RNF223
GSTA4
FMC1-LUC7L2
FMC1
PMF1-BGLAP
PMF1
TRIM7
RPL13
CPNE7
CHD8
ADCK5
TSEN34
TMC4
MBOAT7
BRD3OS
MAP1LC3B
FBXO31
DPP9
MVD
PAM16
OLFM1
NOC4L
DDX51
SSBP2
KNL1
NEMF
IFITM10
CTSD
NELFB
PDX1
PLA2G6
PCGF2
VCX
RPS29
MDM4
RAB11FIP3
PTGES2
PLXDC1
UNKL
LAT2
RAB11A
SLC19A1
KHSRP
TRIM72
PYDC1
ZHX3
ART1
PFKP
ZBTB37
B3GNTL1
CCDC197
TEPSIN
NDUFAF8
OGDH
SBNO2
ZNF541
DEGS2
LOXL3
DOK1
LRTM1
KRBA1
HES7
ALOXE3
PTP4A3
GLIPR1L2
WBP1L
BAIAP2L1
OSGIN1
SPATC1L
HEXIM1
GRTP1
ZBED9
EEF1A1
TOLLIP
GFI1B
BCL2L10
RER1
MORN1
IMP4
CCDC115
CCDC57
LRRC6
NDUFS7
CRHR2
BORCS6
FER
GCNT3
NCALD
DENND1B
CXXC5
ELSPBP1
BSPH1
HMGN4
MAFK
BTBD2
MAS1
DCT
RAD23B
ANO7
STXBP1
SBNO1
CUL3
TP73
PHACTR3
TTC16
PTRH1
YJEFN3
OR4Q2
OR4K14
CILP2
UNK
RGS9
H3-3B
OR10R2
OR10K1
NBPF12
MKNK2
PRR14
FBRS
KLHDC10
SPI1
MBL2
KANK1
PBX2
GPSM3
AGER
ULK1
HDDC2
BTNL9
SPOP
ZBTB32
CREB3L3
C11orf95
FST
ETS2
PBX1
LITAF
PXDN
SLURP2
LYNX1-SLURP2
LYNX1
TECR
DNAJB1
SSH1
TRAPPC9
HRH3
USP22
C1QTNF7
IFI27L2
CEBPB
SP4
C4orf19
PRSS16
TMEM86B
PRR29
UBE2L5
CIB3
USF3
GH1
CSHL1
ABR
CAPN12
COLEC10
SLC36A2
MB
APOC3
APOA1
SCYL3
GOLPH3
FAM89A
DEFB129
IQUB
ZCWPW1
PPP1R35
MEPCE
VGLL4
PRELP
ZFPM1
NAPRT
MROH6
CMKLR1
KASH5
DICER1
WEE2
ZNF184
SIT1
CCDC107
ARHGEF39
JRK
ESRP1
FZD8
VCX2
SMARCD2
RAB6A
LRRC15
CACNG4
RFC5
NOTUM
COTL1
SMARCD3
SECTM1
CCDC7
PTPN9
KCTD9
CDCA2
ACSF3
LOC102723971
B4GALNT4
KRTAP5-6
SETDB1
TOR4A
SLC29A4
KLK14
SPRING1
RNFT2
MRPL58
CDK18
TMPRSS6
PKD1
ZNF605
DYNC2I1
RGS19
LKAAEAR1
EOLA2
JARID2
HELZ2
FNDC11
SHISA9
ADI1
KRT1
MFNG
LARP1
MRC2
DPEP1
CLDN34
FCGR3A
FAM240C
CALY
TMEM220
AFG1L
SMG7
FRMD6
BCAM
AHRR
LY6E
SMARCC2
CDH11
TNFRSF6B
TIMM44
THSD4
INTS1
UBE3C
SYT3
CACNG6
ZDHHC6
VTI1A
SYNGAP1
PHF1
LOC101928841
CUTA
PHLDB3
KRT8
POU5F1B
VLDLR
CTDSP2
CORO2A
AK1
MYL12A
ACTA1
JAGN1
IL17RE
LPCAT4
UBAP2
FAAH
MSRB2
ATXN7
TRIB1
MYL12B
SUZ12
FIBCD1
KLK4
ZNF512B
SAMD10
PRPF6
PRLH
ARF3
CLN3
C10orf67
APOBR
PI16
GPIHBP1
SPEF1
CENPB
CDC25B
AGXT
TNNT1
TNNI3
MAP1B
NPRL3
MYADML2
OR10H5
OR10H1
CCL25
KDELR1
GRIN2D
CEP72
MC1R
NBPF11
C1QTNF12
FTCD-AS1
SLC7A2
FAM174C
EFNA2
PELI3
FAM236B
FAM236A
ZBTB46
LRRN3
MTMR4
VCX3B
BDKRB1
PRRG2
PRR12
POR
USP34
NBPF15
WBP4
TLCD1
RPL23A
RAB34
NEK8
HOPX
ELF1
PAXBP1
BIRC7
PPP1R21
C17orf58
SPIRE2
MTRF1
EYS
PPP1R13L
POLR1G
NCBP2AS2
NCBP2
P2RX1
UBC
TMEM107
MZF1
PRR5-ARHGAP8
PRR5
DSTN
BFSP1
SIGIRR
USP38
TTYH1
SLC8A2
CD164
CHAT
PDE7B
KNDC1
HMX1
PHF21A
UGGT1
RASSF2
LCN12
FBXW5
C8G
ZNF865
ZNF524
PRTG
FIZ1
ADAP1
APOH
CYB5R1
CBLC
CMBL
RNF43
PCNX1
SP3
KCTD13
FGF12
NOS3
OVCA2
APOC1
TMEM65
WDR49
JPH4
TTYH3
RASA4B
DRC7
C17orf64
RSF1
AAMDC
TUBA1C
RECQL4
MFSD3
LRRC14
GPT
VCX3A
MECOM
LARGE1
ALKAL2
CABP2
TLK1
OTOF
MINAR1
ARFGEF2
OGFOD2
ARL6IP4
SLC6A18
BCAS3
CATSPERG
SNAPC4
PMPCA
ENTR1
CAP2
TFEB
SNRPA
C19orf54
MBNL1
POLK
CERT1
SLC43A2
USP32
IGLON5
CREM
RASA4
CADM4
MLXIPL
C16orf72
MAML3
HECW2
CCDC8
BRPF1
LASP1
ESPNL
FCGR3B
DACT3
ACTR3
MEAK7
NIM1K
NAV1
DNAJB8
CRELD2
ALG12
URGCP-MRPS24
URGCP
NOTCH1
APPBP2
TSC2
SLC9A3R2
NTHL1
MUC20
KLK7
KLK6
FOXJ2
POM121L2
VPS26C
LENG9
CDC42EP5
RTEL1
EFCAB2
NCR2
MCTP2
IQCE
BRAT1
RNASEH1
HDHD3
ADNP
MSI2
CLTC
ESRRG
LHFPL2
FGFR4
UGT1A4
UGT1A3
RAMP3
CACNA1S
ASCL5
SIPA1L2
RNF166
CTU2
TMEM18
POU2F1
GREB1
SMURF1
ITPR1
FOXA2
SPACA6
TMEM121
SP1
SLCO3A1
LAD1
DDI2
PDP2
LHX3
TP53RK
SLC13A3
INTS9
HMBOX1
NAP1L5
ECH1
CST3
SLC6A19
AMMECR1
RCAN3
SETD1A
TMEM52
FKBP3
FANCM
CTCFL
NKX2-1
NTMT1
CPLX2
ZFP41
MYADM
MFRP
C1QTNF5
SCYL1
KCNC3
STS
PUDP
SATB2
CDH22
BTNL10
ZNF148
KCNQ2
PALLD
CHRNA4
PCBP2
PHF23
GABARAP
DVL2
VNN2
TMEM40
PIEZO1
PSAPL1
RPH3A
PRDM11
LCN8
LCN6
LCN10
CWC25
ZNF862
OCLN
ABI1
PITPNM3
NPEPPS
TMEM63C
DHX34
CREBBP
C5AR2
ACTRT2
EOLA1
SART1
BIRC2
SRSF9
EHD2
DYNLL1
NIBAN2
VEPH1
TSHZ3
FBXL19
PI4KB
ZNF358
TEX45
MMP15
MED6
LHX6
ITIH5
RASSF5
CA4
TMEM242
PARD3
RPUSD1
CHTF18
ACOXL
NFATC4
TXNIP
NOL10
KNOP1
IQCK
GPR78
PIH1D1
ALDH16A1
SNX16
RTL6
RCL1
HTR1F
PLCXD1
LMTK3
IQSEC3
DYNLL2
PLXDC2
AHCYL2
SERPINA3
HS3ST2
GOLGA6L7
ZNF205
SKIDA1
MLLT10
MGA
IL26
SULT2B1
RRM1
LRGUK
PLCB1
LIN54
SEZ6
KLHL23
TAF6L
POLR2G
HERC4
RAB40A
ATP1A3
CREBRF
LILRA4
FOXK1
CNPY1
TRIM14
LRRN2
LMNB1
CMIP
ARID2
BRD2
BBX
VARS2
GTF2H4
MYMK
NR5A2
PRSS27
EXOSC4
RS1
PPEF1
CCDC112
GOLGA6L10
FBXO11
POMC
SERPINB9
SS18L1
PSMA7
MTRNR2L4
SMG1
SIGLEC15
NPAS3
BCAT2
VILL
ZFR
PPM1D
GNAS
TSC22D1
SKA2
PRR11
NGB
GAS7
DRG1
DBP
CA11
LOC110384692