ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708085 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX4708037: Hep G2

◣ SRX4708085: K-562

◢ RBM39: STRING

EAPP
KIF5C
TAF12
DUX4
WDR74
STX5
MTRNR2L2
MSH3
DHFR
POLDIP3
H4C2
H3C2
H2AC4
H4C1
H1-2
CNOT3
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MTRNR2L1
CCDC200
PHRF1
MTRNR2L8
TOP3B
H4C12
H4C11
H2BC14
H2AC14
NPAS4
ADARB1
SIRT4
USP30
MBLAC1
FRG2
H4C3
H1-6
H3C6
H2BC8
H2AC8
PRAME
DMAP1
CCNI
ART1
SRSF3
PTPN6
C12orf57
TMEM107
SRSF7
DRD4
KMT2E
TMEM242
GBA
CCDC125
FRG2C
H4C9
H2BC12
H2AC12
OPN1SW
CCDC136
INTS12
GSTCD
TMEM167B
PAFAH2
PAXBP1
SF3A3
H2BC11
H2AC11
H2BC15
H2AC15
PRDX1
ZBTB4
SLC35G6
POLR2A
H3C12
H2BC17
H2AC17
EEF1A1
EIF2B3
CALM2
POLR3E
SEC22B
COL23A1
NASP
CRKL
NCOA7
EXOC2
MKRN3
PPP6R3
NGB
H4C5
H3C4
H2BC7
H2AC7
EFHB
PUM1
TMC4
LENG1
ZC3H10
RPL41
MRPS15
H3C1
H1-1
PTPRN2
TUBA1C
RPL5
PTPRH
PBLD
HNRNPH3
LY6L
WDR36
GJD3
ZKSCAN8
RGPD2
RGPD1
SACM1L
GTF2IRD2B
HSP90AB1
KIF2C
TTC26
LIN28A
TNPO3
RBBP5
SLC25A51
DSTYK
KLHDC10
RPS27
RAB13
CTNNB1
SREK1IP1
CWC27
RBSN
FAM98B
RRP15
RPS12
HSPA1B
UBE2D3
CAMK2G
TRAF7
RAB26
PHF19
LACTB
PRMT5
TUBA1B
MAT2A
NDUFS7
ATF4
TMEM262
BMS1
POLR2J3
NUF2
MTIF2
ZNF627
GTPBP3
ACP5
FUS
NXF1
RPL12
LRSAM1
INTS6
SHF
KANSL3
FER1L5
EIF4B
MTF2
E2F2
BCR
RPL32
TOR1AIP2
TOR1AIP1
STX10
IER2
RPL15
NKIRAS1
SNRPB2
RAP1GAP
SUGCT
MPLKIP
TBC1D5
SSBP1
BRF2
CCDC188
PCBP3
KDM8
STAT3
VILL
GET1-SH3BGR
GET1
TATDN3
NSL1
COX16
H2BS1
TTI2
P4HA1
EGR1
ZC3HC1
COMP
AAR2
MRPS18B
ATAT1
H2BC21
H2AC21
H2AC20
EIF4A2
FLYWCH2
NFKBIL1
DDX39B
ATP6V1G2
RTP3
LTF
MED23
ENPP3
TACO1
ZBTB37
RPS3
INO80C
GDF15
LTA4H
ST3GAL4
H2BC5
H1-4
CSDE1
H2AZ1
DNAJB14
CYCS
RBM28
FAM133B
LUC7L2
ITPR1
SNRNP35
HSPA6
CETP
MTRNR2L9
GTF2IRD2
UBE2L3
APELA
GTF2A1
PLEKHM3
RHEBL1
KMT2D
KNL1
VPS52
RPS18
B3GALT4
CCAR2
C8orf58
SLC30A6
ACBD6
TRUB2
COQ4
BRMS1
B4GAT1
NME1-NME2
NME1
DCLRE1B
AP4B1
HTR5A
BCAR3
ANGPTL4
RPLP0
GCN1
NUP214
DRG2
RFXANK
BORCS8
PPIL2
MRPL44
GINS3
BNIP1
PPP6R1
RPS26
TBC1D19
SNX16
GTPBP6
RIF1
CCDC116
SDF2L1
OR2T1
SPDYC
H4C8
SRSF2
MFSD11
YARS1
S100PBP
TUBB4B
STPG3
FAM166A
VPS72
PIP5K1A
PARP16
DCTN6
ZNF391
NBPF1
CRB1
RXFP3
RTL10
GNB1L
POLR3B
SHISA4
TMEM259
CNN2
HMGA1
LILRA5
TRIP4
PCLAF
SLC24A1
INTS14
CYB561D1
ATXN7L2
SNAI1
L1CAM
MRPS23
ID1
ZSCAN30
LSM2
HSPA1L
HSPA1A
SSBP2
C8orf37
JPT1
EIF4G2
CCDC59
E2F6
GSTA4
SFPQ
ZKSCAN4
NKAPL
RPS7
ASH1L
SURF2
SURF1
RPL7A
MED22
RPS20
TSC1
GFI1B
RTBDN
ZNF253
MAST1
BPIFB1
SPATC1L
MRPL21
IGHMBP2
BBS1
UTP3
ZDHHC8
DCAF10
ZNFX1
TIMM17A
LMOD1
ZBTB11
RPL24
IGLL5
GPR182
TLCD1
RPL23A
RAB34
PROCA1
NEK8
XKR7
FMC1-LUC7L2
FMC1
MAPK1
TREM1
MTERF1
PNP
PIP4P1
NFATC2IP
EIF1AD
CST6
BANF1
TRAF4
CPPED1
BRD2
DCT
ZNF280A
FRA10AC1
RPS24
POLR3A
RBMX
NDUFS3
KBTBD4
FAM180B
YTHDF2
ADGRG1
PLXDC1
NPR1
ILF2
FLNB
CLTC
CCNC
TRIM7
FANCD2OS
BRK1
SLC34A1
FIBCD1
GTF2H2C
TM9SF1
IPO4
GTF2H2
H2BC4
H2AC6
H4C13
H3C11
H2AC16
H1-5
PSMD5
RCOR3
KIF15
KIAA1143
NSUN4
FUT7
C9orf139
ABCA2
IER5
ZNF385A
C11orf49
RPL10
RPSA
RAF1
TCTE3
ERMARD
RPL11
MPZL1
ZNF683
CRYBG2
EIF1
NABP1
PPP2CB
AP3S2
ARID1A
TMEM101
GPN3
FAM216A
AMBRA1
STXBP3
RAB11A
THOC1
NECAP2
PARK7
NACA
POU2F1
TAF1D
C11orf54
SRSF1
MST1
NEK2
TRA2B
TSFM
AQR
EPS15
GP1BB
SLC44A2
PTPRF
STX16
IMP4
CCDC115
EFNA3
SUPT7L
SLC4A1AP
KANSL2
HTR3D
AIFM3
AARS2
TMEM267
ZMPSTE24
TMCO2
TSEN34
SELENOH
KNTC1
MYC
EPB41
HCN2
MRPL39
UQCC3
LBHD1
CSKMT
C11orf98
RPL37
CARD6
ARL15
POLG
SECISBP2
CKS2
TPR
ODR4
TMEM209
SSMEM1
PLCD3
ACBD4
H3C10
H2BC13
H2AC13
NFE2L2
PIGC
C1orf105
IMMP2L
ZNF768
ZNF747
KLHL20
C19orf12
AGAP3
ZBTB33
TEDDM1
GLUL
TMEM238
TMEM190
RPL28
GDPD5
PMF1-BGLAP
PMF1
STX18
TNFRSF21
MRPS33
HINT3
VPS13B
THADA
FOS
VARS2
GTF2H4
DDX18
BTG1
PMPCB
FANCD2
SCCPDH
UBALD1
MGRN1
EIF2D
ZFP64
OLA1
MUC3A
LRIF1
SLFN12L
ERVH48-1
PSMD3
TDG
C12orf73
VWA7
SAPCD1
GABBR1
LRRN2
MRPL40
HIRA
FAN1
TMEM222
FOXJ3
RHCE
PCGF2
RPS15A
STX6
ZNF207
C17orf75
PVRIG
SMG7
ST3GAL3
SLC39A3
TEFM
ZC3H15
PPIH
SNRPE
MRPL1
MAN2C1
ITGB3BP
EFCAB7
ADPRHL1
TTYH2
RPL38
HMGN4
RSPH6A
ZBTB20
TXNRD2
COMT
DARS2
CENPL
RNPEP
RPS23
ATP6AP1L
RPL19
CACNB1
SAR1B
JUNB
SMIM5
GALK2
COPS2
CYP4F11
H4C4
HNRNPA2B1
CBX3
CEBPE
H2BC6
POP7
NDUFA9
LINGO1
AKAP3
RPL23
LOC102724770
DGCR6
RPS8
ING3
SNRPF
TMEM119
MRPL48
WBP1
INO80B
PRR3
GNL1
MRPS18C
HELQ
ILF3
NUP205
ZCWPW1
TJP3
PPP1R35
MEPCE
FTL
NDUFAF1
MAP3K6
LRGUK
GTF2H2C_2
LRRC37A3
LBP
CSAD
RPL34
RPL27
IFI35
REXO4
ADAMTS13
HLA-B
ZNF429
SEPTIN5
RNF6
NPDC1
ENTPD2
RAET1G
VAMP4
HEXIM1
GART
SLC12A6
NUTM1
NOP10
ACTB
CCDC90B
METTL1
EEF1AKMT3
CYP27B1
OBSL1
INHA
INTS7
DTL
BCL3
PIP5K1C
ZSCAN12
PDE11A
RBM45
KDM3A
C6orf47
BAG6
APOM
FZD1
TSPOAP1
YBX1
HOXC6
KDM5A
CCDC77
RBM17
HOXC5
DDX1
SPOCD1
ZNF843
ELAVL3
NBEAL2
CCDC12
H3C13
H2BC18
ZWILCH
SNAPC5
RPL4
RTN4
NR1H3
ACP2
SLC12A5
ZNF184
TMA16
MAP3K7CL
CCT8
BPGM
RSRP1
ST7
MARCHF7
ALKBH3
MITD1
MLH1
EPM2AIP1
INTS5
GANAB
GRM4
CHEK1
SF3B3
COG4
BAZ2A
ATP5F1B
ZNF92
PRRG2
NOSIP
MED18
ZEB2
DDR1
HNRNPAB
LZTR1
CRCP
FBXO8
CEP44
SPAG1
POLR2K
SIGLEC10
FBXO43
DDX43
TEX9
RFX7
UCKL1
AGBL3
DDX21
ISOC2
HMGB2
MOB1B
GNA13
MTBP
MRPL13
NUDT5
CDC123
UBQLN3
PPIA
THAP9
SEC31A
BAIAP2
NUFIP2
TIPARP
CENPW
SLC27A4
OR2B2
TFAM
CCDC106
TAOK1
U2AF2
MRPL42
HKDC1
MRPS31
PRADC1
CCT7
GDAP1
DR1
LARS2
GOLGA3
KEAP1
KIAA1522
TBL3
RPS2
RPL3L
RNF151
NDUFB10
SNRPB
METTL8
DCAF17
NFYC
SLC17A7
PIH1D1
ALDH16A1
GMEB2
RAB33A
MAMDC2
AIFM1
MTHFD2
ATR
NBN
C2CD5
AHCY
SND1
PHF10
RGS19
OPRL1
LKAAEAR1
MEAF6
SWSAP1
PALB2
DCTN5
SMARCD2
TTC4
IFRD1
CAMK2N1
TMEM248
YJU2
ZCCHC10
PCNT
C21orf58
FAM89A
ELAVL1
EBI3
CCDC88A
ZCCHC4
IARS1
FUT10
SLC33A1
PDLIM2
SSR3
EEF1AKNMT
RBM48
PEX1
OR10P1
SLC6A9
RPL36A-HNRNPH2
RPL36A
BTK
TEDC1
CRIP2
CRIP1
SYVN1
SORBS3
P2RX6
ACYP2
CCNG2
CCT2
TCAF2
NUP107
SPDL1
HFM1
ZNHIT3
RAB3GAP1
ZNF703
PLIN3
ERAL1
CALB1
MRPL16
SYT7
RREB1
GPANK1
CSNK2B
PPM1D
BRIP1
ADNP
ADRM1
LY6G5B
ARL1
FFAR3
FFAR1
PEX3
ADAT2
ARL6IP1
C14orf93
TANK
PUS10
PEX13
PRMT3
MDM4
DPP8
CNOT4
HDAC2
CLEC3B
CCL1
CCL13
RPL31
BRWD1
SMG9
NEU3
CEP85L
TAS2R40
GNAI2
KPNB1
NDUFC2-KCTD14
NDUFC2
PCF11
SIRT5
REV3L
YWHAE
RIPPLY2
CYB5R4
PSMA1
DYNC2I1
CYRIB
DCSTAMP
NDUFS4
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
DHH
UNK
H3-3B
PSME3
BECN1
USP45
TSTD3
ZNF518A
DNAJB12
TMEM168
EXD1
CHP1
DHX9
DPP9
CBX5
JUND
IQCN
RNF168
HNRNPA1
PHLDB1
WFIKKN1
METTL26
ZNF56
SMCO1
PPM1F
MDGA1
GTF2B
SECISBP2L
RPS10-NUDT3
RPS10
DDX3X
POLR3D
MED15
GPR89A
ZNF581
ZNF580
RPL36AL
MGAT2
MUC1
CACYBP
SETDB1
SCG3
HAPLN2
H4C6
H1-3
UBC
SMIM12
PSMD14
CITED2
RAD54L
GMNN
NET1
RINT1
PUS7
GBX1
MTMR9
OSCAR
NDUFA3
CCDC71L
SEMA6B
PAM16
MRPL58
ERCC6L2
DUSP1
ZNF668
ZNF646
FBXO4
TRAF3IP3
SMARCC2
BSDC1
ZDHHC12
RABGGTB
PITHD1
C6orf62
STAM2
PCBP2
RPL22L1
CHMP7
EEF2K
THAP7
SLC36A1
CLUAP1
C16orf90
ZNF839
ZNF408
ARHGAP1
MBTPS2
PPP2R2C
IFNAR1
KCNA7
NPM1
PSMC3
TMEM87A
GANC
PRPF18
RPL6
PTPN11
PNPT1
CENPE
ARHGEF2
POU2F3
GABPB2
AFAP1
MTMR2
POLR1B
ULK4
SF3B2
GAL3ST3
NFIA
MSH4
HSPA5