ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708085 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX4708037: Hep G2

◣ SRX4708085: K-562

◢ RBM39: STRING

WDR74
MTRNR2L2
POLDIP3
H3C2
H1-2
H4C15
H4C14
MTRNR2L8
TOP3B
H4C11
NPAS4
ADARB1
SIRT4
USP30
H4C3
H2BC8
H2AC8
PRAME
DMAP1
CCNI
SRSF3
C12orf57
SRSF7
KMT2E
TMEM242
GBA
H2BC12
H2AC12
INTS12
GSTCD
TMEM167B
PAFAH2
PAXBP1
SF3A3
H2BC11
H2AC11
H4C12
PRDX1
ZBTB4
POLR2A
H2BC17
H2AC17
EEF1A1
EIF2B3
CALM2
POLR3E
SEC22B
NASP
CRKL
NCOA7
EXOC2
MKRN3
PPP6R3
H4C5
EFHB
PUM1
RPL41
MRPS15
H4C2
TUBA1C
RPL5
PBLD
HNRNPH3
WDR36
RGPD2
RGPD1
SACM1L
GTF2IRD2B
HSP90AB1
TTC26
TNPO3
RBBP5
SLC25A51
DSTYK
KLHDC10
RPS27
CTNNB1
SREK1IP1
CWC27
RBSN
FAM98B
RRP15
RPS12
HSPA1B
UBE2D3
TRAF7
LACTB
PRMT5
TUBA1B
H2AC19
H2AC18
MAT2A
NDUFS7
BMS1
POLR2J3
NUF2
MTIF2
FUS
NXF1
RPL12
LRSAM1
INTS6
KANSL3
EIF4B
MTF2
RPL32
TOR1AIP1
RPL15
NKIRAS1
SNRPB2
SUGCT
MPLKIP
SSBP1
BRF2
KDM8
STAT3
VILL
TATDN3
NSL1
COX16
H2BS1
TTI2
P4HA1
ZC3HC1
AAR2
MRPS18B
H2BC21
H2AC21
H2AC20
EIF4A2
DDX39B
MED23
TACO1
ZBTB37
RPS3
INO80C
GDF15
LTA4H
H1-4
CSDE1
H2AZ1
CYCS
RBM28
FAM133B
LUC7L2
ITPR1
SNRNP35
HSPA6
MTRNR2L9
GTF2IRD2
UBE2L3
GTF2A1
PLEKHM3
KMT2D
KNL1
VPS52
RPS18
CCAR2
SLC30A6
ACBD6
H3C4
H2BC7
H2AC7
TRUB2
COQ4
B4GAT1
NME1-NME2
NME1
DCLRE1B
AP4B1
HTR5A
BCAR3
ANGPTL4
RPLP0
NUP214
DRG2
H3C15
H3C14
RFXANK
BORCS8
PPIL2
MRPL44
GINS3
BNIP1
PPP6R1
RPS26
TBC1D19
SNX16
RIF1
SDF2L1
SPDYC
H4C8
SRSF2
MFSD11
YARS1
S100PBP
TUBB4B
VPS72
DCTN6
ZNF391
NBPF1
CRB1
RTL10
GNB1L
POLR3B
TMEM259
HMGA1
TRIP4
SLC24A1
INTS14
ATXN7L2
SNAI1
L1CAM
MRPS23
ZSCAN30
SSBP2
HSPA1L
HSPA1A
C8orf37
JPT1
EIF4G2
CCDC59
E2F6
GSTA4
SFPQ
RPS7
ASH1L
RPL7A
MED22
ZKSCAN4
RPS20
TSC1
GFI1B
ZNF253
SPATC1L
MRPL21
IGHMBP2
BBS1
UTP3
DCAF10
ZNFX1
TIMM17A
RPL24
PHF19
RPL23A
XKR7
FMC1-LUC7L2
FMC1
MAPK1
MTERF1
PNP
EIF1AD
BANF1
CPPED1
BRD2
DCT
ZNF280A
FRA10AC1
RPS24
RBMX
NDUFS3
KBTBD4
YTHDF2
ILF2
CLTC
CCNC
BRK1
GTF2H2C
IPO4
GTF2H2
H2BC4
H2AC6
PSMD5
RCOR3
KIF15
KIAA1143
H1-5
NSUN4
ABCA2
IER5
C11orf49
RPL10
RPSA
RAF1
TCTE3
ERMARD
RPL11
NABP1
PPP2CB
AP3S2
ARID1A
TMEM101
GPN3
FAM216A
AMBRA1
STXBP3
RAB11A
THOC1
NECAP2
H2BC5
PARK7
NACA
POU2F1
TAF1D
C11orf54
SRSF1
MST1
NEK2
TRA2B
TSFM
AQR
EPS15
STX16
SUPT7L
SLC4A1AP
KANSL2
HTR3D
AARS2
TMEM267
ZMPSTE24
SELENOH
KNTC1
MYC
MRPL39
CSKMT
C11orf98
RPL37
ARL15
POLG
TPR
ODR4
CKS2
TMEM209
ACBD4
ATF4
H2BC13
H2AC13
NFE2L2
PIGC
IMMP2L
ZNF747
KLHL20
C19orf12
GLUL
RPL28
STX18
TNFRSF21
MRPS33
HINT3
VPS13B
THADA
FOS
GTF2H4
DDX18
BTG1
PMPCB
FANCD2
SCCPDH
MGRN1
EIF2D
ZFP64
OLA1
LRIF1
PSMD3
C12orf73
GABBR1
MRPL40
HIRA
FAN1
TMEM222
FOXJ3
RPS15A
STX6
C17orf75
SMG7
ST3GAL3
SLC39A3
TEFM
ZC3H15
PPIH
SNRPE
MRPL1
MAN2C1
ITGB3BP
EFCAB7
ADPRHL1
RPL38
ZBTB20
DARS2
CENPL
RNPEP
RPS23
ATP6AP1L
RPL19
SAR1B
JUNB
GALK2
COPS2
SMIM5
CYP4F11
HNRNPA2B1
CBX3
H4C4
POP7
NDUFA9
LINGO1
AKAP3
RPL23
RPS8
ING3
SNRPF
MRPL48
INO80B
PRR3
GNL1
MRPS18C
HELQ
NUP205
ZCWPW1
TJP3
MEPCE
FTL
NDUFAF1
LRGUK
GTF2H2C_2
LRRC37A3
RPL34
H2BC15
H2AC15
RPL27
REXO4
ZNF429
GP1BB
RNF6
H4C9
NPDC1
VAMP4
HEXIM1
GART
NUTM1
NOP10
CCDC90B
METTL1
EEF1AKMT3
OBSL1
INHA
INTS7
DTL
SHF
ZSCAN12
RBM45
KDM3A
BAG6
FZD1
YBX1
KDM5A
CCDC77
RBM17
HOXC5
DDX1
SPOCD1
ZNF843
CCDC12
H2BC18
RTN4
NR1H3
ACP2
TMA16
CCT8
BPGM
RSRP1
ZWILCH
RPL4
MARCHF7
H2BC14
H2AC14
ALKBH3
MITD1
MLH1
EPM2AIP1
INTS5
CHEK1
SF3B3
COG4
ATP5F1B
ZNF92
PRRG2
NOSIP
ZEB2
MED18
HNRNPAB
LZTR1
CRCP
FBXO8
CEP44
POLR2K
EGR1
AGBL3
DDX21
ISOC2
HMGB2
MOB1B
GNA13
MTBP
MRPL13
NUDT5
CDC123
PPIA
THAP9
SEC31A
NUFIP2
TIPARP
CENPW
SLC27A4
TFAM
TAOK1
MRPL42
MRPS31
PRADC1
CCT7
GDAP1
DR1
LARS2
GOLGA3
KEAP1
RPS2
SNRPB
METTL8
DCAF17
NFYC
AIFM1
MTHFD2
ATR
NBN
C2CD5
SND1
PHF10
MEAF6
SWSAP1
EIF1
PALB2
DCTN5
SMARCD2
TTC4
IFRD1
YJU2
ZCCHC10
PCNT
C21orf58
CCDC88A
ZCCHC4
IARS1
FUT10
SLC33A1
SSR3
EEF1AKNMT
RBM48
PEX1
RPL36A-HNRNPH2
RPL36A
BTK
SYVN1
P2RX6
ACYP2
ZKSCAN8
CCNG2
CCT2
TCAF2
NUP107
SPDL1
HFM1
ZNHIT3
RAB3GAP1
ERAL1
CALB1
H3C13
MRPL16
SYT7
RREB1
PPM1D
BRIP1
ADRM1
GPANK1
CSNK2B
ARL1
PEX3
ADAT2
ARL6IP1
TANK
PUS10
PEX13
PRMT3
DPP8
CNOT4
HDAC2
RPL31
BRWD1
SMG9
NEU3
CEP85L
GNAI2
KPNB1
NDUFC2-KCTD14
NDUFC2
PCF11
SIRT5
REV3L
YWHAE
CYB5R4
PSMA1
DYNC2I1
NFKBIL1
ATP6V1G2
NDUFS4
H3-3B
TSTD3
ZNF518A
TMEM168
EXD1
CHP1
DHX9
PSME3
DPP9
HNRNPA1
METTL26
ZNF56
MDGA1
GTF2B
SECISBP2L
RPS10-NUDT3
RPS10
DDX3X
POLR3D
MED15
GPR89A
RPL36AL
MGAT2
MUC1
CACYBP
SETDB1
SCG3
H1-3
UBC
SNAPC5
PSMD14
CITED2
RAD54L
GMNN
NET1
HMGN4
RINT1
MTMR9
VWA7
CCDC71L
OSCAR
NDUFA3
MRPL58
ERCC6L2
DUSP1
ZNF668
ZNF646
FBXO4
SMARCC2
BSDC1
RABGGTB
PITHD1
STAM2
SMIM12
PCBP2
RPL22L1
CHMP7
EEF2K
THAP7
SLC36A1
CLUAP1
ZNF839
ZNF408
ARHGAP1
MBTPS2
COMT
IFNAR1
NPM1
PSMC3
TMEM87A
GANC
PRPF18
RPL6
PNPT1
CENPE
POU2F3
GABPB2
MTMR2
POLR1B
ULK4
NFIA
CBX5
MSH4
HSPA5
ZNF76
VTA1
NMBR
ABT1
LSM5
CCNL1
H2AC4
NEU1
BECN1
C12orf65
SNRPD1
ZNF25
TCP11L1
DHPS
POLB
NOL12
PKIB
SERINC1
CARD8
TRMT11
TFRC
RPL9
LIAS
ZNF184
TTC30B
TOMM5
ECHDC1
EIF3F
ZNF165
PPIP5K2
GIN1
MZF1
JMJD7-PLA2G4B
JMJD7
HBG1
GADD45B
ARMCX5-GPRASP2
ARMCX5
NIP7
COG8
JMJD1C
PIH1D2
NKAPD1
TMBIM4
DPY30
SLC35F5
PPP1CC
PURB
MRPS36
TYW3
CRYZ
NSRP1
CTNND1
FAM53C
CDC25C
ZSCAN31
ZCCHC7
FOSL1
INTS2
NCDN
KIAA0319L
XRCC4
TMEM167A
ZC3H10
MTF1
EEF1AKMT1
SCAND1
RPLP1
AJUBA
BIRC6
CENPC
PPIL4
NAT10
DTX4
SLC1A5
RGL2
PSMA5
SNX30
C3orf86
E2F3
PARP2
SLC35B1
METTL2A
MDM4
SLC29A3
METTL2B
BRAP
ACAD10
BRAF
PTCD2
MRPS27
SRRT
PGGT1B
H4C1
ZNF670
TKT
NCAM2
PABPC1
HNRNPC
ZNF574
RPL22
CENPN
ARL4A
TRIM44
STOM
SNRPA
WTAP
SOD2
RPL10A
U2SURP
GTPBP10
SDHAF3
WAC
URB1
ZNF140
ADGRL1
PPP1R37
DIDO1
PIGBOS1
PIGB
MEMO1
MMADHC
GID8
ZNF189
MRPL50
SMARCC1
ZNF576
IRGQ
ZNF791
ZNF490
ZNF107
SMG8
REXO5
ERI2
FBXW2
ZSCAN21
ZNF300
PRRC2A
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RBM4
FSCN1
PCLAF
CCDC174
RTEL1
FAM149B1
ECD
PACSIN2
TRAPPC3
COX7C
GLRA1
PDE4C
MTOR
MECOM
KRR1
FER
ITPRID2
NOL8
CENPP
COX20
ATP5PO
HELB
TMEM41A
SEC14L1
SERBP1
UBB
PPIG
PHTF1
ZNF227
SLC25A1
WDR11
MYLIP
RIOK1
CAGE1
CETN3
MIA3
LMAN2
UTP20
SYCP2L
DDX19B
AARS1
TUT1
ARL2
IQCG
CCNB2
RPL35A
EIF4EBP1
SLC25A16
EIF3E
RBL1
THUMPD3
BRIX1
ZSCAN25
WARS2
PSMA2
MRPL32
RPUSD4
FAM118B
ATP5MF-PTCD1
ATP5MF
IPO8
CHD2
MCL1
ZNF609
ZSCAN9
SREK1
AP1G1
MRPL17
AMD1
USP8
CDIPT
RAD54B
DNA2
ZNF268
MYL6
PDE4A
RPL30
SHB
TPK1
AURKAIP1
AFF1
TANGO6
MPHOSPH10
MCEE
UBR4
DNAJC2
PTPA
CRAT
ZNF35
CSTF2T
PPP5D1
CALM3
IQCH
AAGAB
STEAP1B
SOX6
C11orf58
SPG11
ZNF138
DNTTIP2
TRIAP1
SUPT16H
METTL6
EAF1
SINHCAF
CCNT1
DDIT3
DHRS4
DDAH2
TNPO1
METTL18
C1orf112
PRCC
SLC7A6
FBXL13
ARMC10
ATP10D
TSSC4
CDK12
ZNF780B
VPS33B
MAGEA6
BCAS2
WWOX
ZBTB45
ZNF397
DDX49
COPE
NBEAL2
ZNF493
PPIL1
RPS4X
OCIAD1
ST7L
CAPZA1
RBM25
HNRNPD
TRNT1
ZNF180
FAF1
SETD9
HNRNPH1
DNAJB12
YTHDC1
MAD1L1
RPL39
HPCA
FNIP1
CBFB
PHACTR4
DPH5
MRPS16
TTC33
RHOF
WNT2B
HSPBP1
ZNF484
POLA1
HDAC6
IQSEC3
MSL2