ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708037 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◣ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ RBM39: STRING

H2BC12
H2AC12
SNRPB2
H3C2
H2BC11
H2AC11
H4C11
SPATC1L
H4C12
H2BC21
H2AC21
H2AC20
H2BC17
H2AC17
NSFL1C
PEX3
ADAT2
IQSEC3
H1-4
H2BC5
EIF1
ABCC6
EXOC2
SRSF6
PRDX1
H3-3B
STX16
RPS12
MTRNR2L8
MRPL44
TMEM242
H4C15
H4C14
PSMD3
SRSF2
MFSD11
MED23
UBC
POLR3E
FUS
PSMF1
FAM53C
CDC25C
H2AC19
H2AC18
NOTCH2NLA
RPS20
NOTCH2NLC
METTL9
KANSL3
ZC3H6
MAT2A
GTF2H2C
GTF2H2C_2
HERPUD1
COPS7B
EEF1A1
IPO4
CPPED1
NOTCH2
GTF2H2
PALB2
DCTN5
RABGGTA
CTNNB1
NXF1
SRSF7
ENOSF1
NPAS4
MTIF2
CBWD5
CBWD3
RPSA
DDX1
HSPA5
PET117
KAT14
SCFD1
MARCHF7
PRMT5
PCK2
NRL
NOTCH2NLB
TMEM230
H2AX
H1-2
CCDC88A
RPL5
ATF4
ZSCAN12
ZNF76
H2BC13
H2AC13
H3C4
H2BC7
H2AC7
H2BC14
H2AC14
ACTB
RPS15A
SLC35C2
RBSN
P4HA1
SLC39A3
KIF16B
CALM2
NME1-NME2
NME1
TRIP4
CLTC
WTAP
SOD2
HSPA1B
AAR2
MTHFD2
SCAND1
STX18
JPT1
MTF2
HSPE1-MOB4
HSPE1
HSPD1
RPLP1
EIF2D
RPS2
CBWD6
RPLP0
BRD2
GTF3C3
NUBP1
NABP1
TMEM41A
DPY19L4
SNRPB
HNRNPA2B1
CBX3
RPS23
ATP6AP1L
SMARCD2
RPS16
DCAF10
MRPL39
ZCCHC4
MTRNR2L9
DDX5
SLC39A10
CCDC59
CHMP4A
GTF2A1
PLEKHM3
E2F6
HEATR5A
TRIM25
RWDD1
POLR2J3
ARL6IP1
MANBAL
RPL37A
EIF4A3
MCL1
DTD2
H2BC15
H2AC15
TTI1
RPRD1B
ACYP2
UBE2S
TTPAL
FRA10AC1
ANKRD36C
ATF3
DMAP1
RPS3
TIGD1
MRPL3
EIF4E2
LOC389831
IER5
SRCAP
LOC730183
CDK5RAP1
TOB1
OXA1L
FAM227B
DTWD1
MRPS23
SLC25A21
PPP4R3B
TSEN15
RGPD8
RGPD6
RGPD5
TRPC4AP
SCML1
KDM8
YARS1
S100PBP
SLC24A1
INTS14
NANP
COMMD1
CCT4
ZCCHC3
ZKSCAN2
ZBTB4
POLR2A
RAF1
RPL3
ARHGEF12
NUF2
CCNL1
RMDN2
RPL23A
HNRNPAB
TMEM18
SLC16A1
GOSR2
PTCD1
CPSF4
C6orf226
CCNI
OAZ1
ATR
LRRC59
LDHA
UBE2F
LOC102724951
LOC102724843
LOC102724219
DNAJA1
APTX
RPL10A
RUSF1
TOB2
NOMO2
ANKRD36B
ZNF337
SMARCE1
KIAA1586
HECTD1
MTRNR2L2
GABPB1
WASHC1
SPHK2
RPL18
PABPC1
ZNF384
TAF15
DHRS4L2
MRPL58
DARS1
ASXL1
BMS1
TAF1D
C11orf54
INO80D
EIF2S2
CSKMT
C11orf98
MRPS31
H2BC4
H2AC6
HNRNPH1
SNX5
MGME1
SEC13
MOB4
ANKRD46
GTF2B
H2AC4
RAB37
UBOX5
FASTKD5
C19orf48
UGP2
ANKRD36
H2BC18
H3C13
CTR9
ZNF609
EDC4
TTC4
PLK1
CHGB
SRSF3
CIRBP
ALG1
PSMA6
PIP4K2B
HUS1
C2orf88
TOP3B
H3C15
H3C14
RPL23
THUMPD1
PDE11A
ARL14EP
NUP214
MIA2
CCDC97
ACVR1
TATDN3
NSL1
SNAPC5
MTMR2
XRN2
NDE1
NCOA3
MARF1
WDR11
NOMO3
CCN2
TACO1
RPL37
TNFRSF21
FOS
PRORP
PPP2R3C
PDRG1
ITFG2
GORASP2
DCP1A
AP1G2
METTL8
DCAF17
SRSF11
CRBN
BCL2L2-PABPN1
BCL2L2
EGR1
SKP1
PSMC5
HAUS4
FTSJ3
SEC14L1
CLK1
ATXN2L
AJUBA
ZNF219
TUBGCP3
CCNC
ALKBH3
VPS16
SURF6
SLX4IP
PCED1A
HSPA9
MYL12A
PCTP
ALG10
PBLD
HNRNPH3
KPNB1
CSNK2A1
NBN
RPS3A
MDP1
ACIN1
ARL15
JRKL
DCAF11
CCDC82
RBBP6
FAM83D
CZIB
STAT3
SRSF10
SUPT3H
MAGEF1
CYCS
GLUL
UBFD1
TINF2
KPNA2
EARS2
LRRC37A3
STAM2
PARPBP
NUP37
CSTF1
AURKA
SMIM12
SENP1
PFKM
IRF9
CBWD1
NDUFS7
TBC1D19
GSTA4
NDUFC2-KCTD14
NDUFC2
DIDO1
RANBP9
AGK
MAN2C1
RPN2
PTPN2
POMZP3
MROH8
FAM98B
TRDMT1
TBP
REPS1
PSMB1
CFL2
RBM28
KMT2D
STAT1
SDCBP
CMTR2
CHMP3
ZSCAN9
TBC1D5
DHRS4L1
ATP5MC2
VWA8
PBK
OTUD7B
TEFM
TMEM94
SEC23A
PCIF1
NT5DC1
HSP90AA1
TUBA1B
SECISBP2L
RTEL1
SLC44A1
ZFHX2
C12orf73
C2CD5
PIGBOS1
PIGB
SLC38A2
RBM34
DPH1
COQ7
MRPS33
TPK1
AURKAIP1
ZNF248
SLC3A2
RDH14
PTP4A1
TRA2B
AARS2
RPL19
PRADC1
CCT7
PSMD14
PYROXD1
NUDCD3
IMMT
RAD54L2
NCL
MTX2
EIF3C
CDC7
C14orf119
SLX1B
SLX1A
RMND5A
POLR2J2
KANSL1
IMPDH2
BOLA2-SMG1P6
BOLA2B
BOLA2
H2BC8
H2AC8
HSP90AB1
VAMP4
GDAP1
TRMT11
ZNF451
XPOT
SYS1
STAMBP
NXT1
CUL7
INTS12
GSTCD
VRK2
UTP4
USPL1
MRTO4
KAT7
HMGB1
EMC1
DERPC
CHTF8
INO80C
PPIA
PRICKLE4
PHIP
FRS3
EXOSC6
SF3B6
RRN3
NAGK
ISOC1
FAM228B
PCBP2
PELO
MFF
ITGA1
ID1
RPL31
RBMXL1
PGBD1
KYAT3
HDAC4
ZNF391
TOX4
RAB2B
KAT6A
DDIT4
TAF3
SLC20A1
SDR39U1
CASC3
MRPL16
ERCC6L2
MYLIP
GFOD2
AGL
ADI1
TDP2
RALGAPA1
PKP4
MTHFD2L
LINC02210-CRHR1
IST1
CCDC148
CBWD2
ACOT13
H4C5
HINT3
RBL1
HEXIM2
RIF1
DDX19B
AARS1
TTC21B
MRPL52
FN1
DHRS4
TUBB4B
TMEM267
WDR43
SRP54
RNPS1
NOMO1
SRSF1
BRWD1
E2F3
TBPL1
PFDN4
ITGAV
DDX59
ANKRD17
SLC30A6
THOC1
SYT7
NEU1
TEX14
RAD51C
MRPS11
MRPL46
MICU2
LIMS1
HDDC2
GGA2
G2E3
U2SURP
SESN2
RPL17-C18orf32
RPL17
PTPN4
HOMEZ
CCDC7
RBM45
SEC62
RBBP9
MAML3
CCNG1
TMEM254
SNX17
RNF146
PSMD7
NOL10
EIF2B4
CYLD
COG2
RTF2
POLR2C
STX6
RNF6
PARP2
RPL27A
FERMT1
DENR
ASNS
RPS8
GTPBP10
ZFP1
NFE2L2
RTN4
CITED2
HNRNPC
TEX10
ADRA1D
ADPGK
WIPF2
STXBP4
PPP1R11
EPM2A
COX11
NBPF1
DR1
ZNF282
THTPA
PTRHD1
CENPO
CDH24
ZSCAN30
TFRC
ZNF524
UNC50
SLC9B1
SCARB1
KDM3B
HMGCS1
FIZ1
ERGIC3
COA5
ATP5F1E
DUSP1
TUFT1
NDUFAB1
DNAJC9
AFF1
C5orf24
SREK1
USP40
PRKAG1
MRPS7
GGA3
CHD8
C17orf75
ZC3H15
RAD54L
PIGU
GPN1
CCDC121
SULT1A4
SULT1A3
RETSAT
MSANTD2
CYP20A1
AMACR
FAM133B
MRPL40
HIRA
SLC9A8
RIPK1
RAB5IF
NDUFB2
H3-2
GBE1
FTH1
CCDC144A
NPM1
TRIP12
SAYSD1
MRPS35
LANCL1
KMT2A
GZF1
FBXO36
EEF2
CSRNP2
CPS1
PARK7
LZTR1
TMEM186
SDC4
RBM12
PMM2
PHF3
MIPOL1
LMAN1
DYNLRB1
CPNE1
CDK1
AGFG1
PPP2CB
VTA1
NMBR
MEMO1
ZNF468
TGOLN2
SNX11
RMI1
RABL2A
HNRNPK
APOB
THAP9
SEC31A
TIMMDC1
RPIA
NFATC3
MFAP3
LSR
FAM177A1
FAM114A2
CRLS1
CKAP2L
AP5S1
ANKRD40
REXO5
ERI2
THUMPD2
TEP1
FRG1
ADARB1
DCLRE1B
AP4B1
EIF4G2
ZSCAN31
TMEM177
PNN
OMA1
DAB1
ZCCHC7
TMEM170A
TJAP1
GADD45A
CUL9
CSE1L
CFAP20
ACTR3
SLC35B1
VSNL1
TOP1
SLC39A7
SDHAF2
RXRB
MCM7
FTCDNL1
EAPP
DNAJC16
CPSF7
CHRM3
AP4M1
KMT2E
ZNF24
RPL13
PNPO
NAA20
MRPL45
MAT2B
GLS
ERLEC1
ASB3
TANK
TMBIM4
TBC1D14
NDUFV2
NARF
LSM8
FUCA2
NFYC
IARS1
UBXN2B
TTLL4
SMIM8
SLC25A6
SCRN3
RSPH3
RRM2
POFUT1
PLAGL2
MTLN
CIR1
C1orf115
ATP5MC3
SLC1A5
RPS6
TRMT61B
TFB1M
GCFC2
EDEM2
TMEM167B
UBE2D3
TCTE3
ERMARD
RPS10-NUDT3
RPS10
VAC14
TMEM217
TCAF1
TBC1D22B
SLC35B2
FLOT1
ETV4
SPOCD1
PCF11
ZNF23
MAPK14
CNOT1
BZW2
BCKDHB
ANKMY2
ACSL3
POLR3B
SAR1B
ZBTB9
TMEM14A
NFAT5
GOPC
GLO1
SNX16
NACA
ITGB3BP
EFCAB7
BECN1
ZCCHC9
YWHAG
TMEM106B
RNF138
PRKRA
POLE4
PKIG
PJVK
MAPK1IP1L
FAM207A
COQ8A
C10orf88
MMADHC
FBXW2
TRAM2
SELENOT
MRPL27
KCTD18
KAT8
GAPDH
EME1
CDC27
BLOC1S6
ABCD3
AP3S2
GTF2H4
THUMPD3
ELK4
VPS26C
NCOA5
KRT18
KCTD5
GSPT1
ERBIN
ASCC1
ANAPC16
AGPS
H2BS1
ZFP64
FAN1
SRP9
UBR2
TM9SF1
STARD7
NKIRAS2
LATS1
ID2
DNAJC7
CALU
LUC7L2
ZNF124
TMEM14B
SKIV2L
PMS1
ORMDL1
NELFE
ALG10B
RPL12
LRSAM1
NR1H3
ACP2
TANGO6
MED4
ZFAND3
WFDC3
RABL2B
PPA2
MRPL33
FGGY
ELAPOR2
DNTTIP1
COX18
DDX3X
BIRC6
POLR2J
SRRM2
SDCBP2
KLLN
GINS1
C2orf42
ATAT1
NCOA7
DRG2
FOSL1
NUDT15
SLC35B3
NUP62
MLEC
LOC110384692
IL4I1
EIF4A1
CALR
C4B_2
C4B
C4A
BPTF
ATF5
ANXA4
SMIM26
SEMA3D
PDCD2
GTF3C5
MTERF1
TPD52L2
TGM2
SGF29
PON2
LARP1
KLHL8
HEXA
GSTK1
BICD2
APPBP2
POLG
ZSCAN26
SUV39H2
RPL36
RFX3
PLS1
NOL7
ICE2
PSD
FANCL
CYP51A1
BTF3
HMGA1
WWOX
TCTN3
SEPTIN2
HDLBP
SFPQ
ZCWPW1
TJP3
MEPCE
MPHOSPH10
MCEE
ZNF770
UGGT1
TMEM214
SMC3
RPL26
PCID2
DKK1
CUL4A
AMMECR1L
GMNN
TBCD
PPP1R3C
ORC2
CPE
CCZ1B
ANGEL1
RRP15
ZER1
VCPKMT
USP42
TMEM33
THEM4
STEAP2
SLC35D1
PIP4P2
MATR3
EIF1B
BRMS1L
BCLAF1
TSTD3
ZNF286A
TNFAIP3
TCF12
SNRNP200
SMAD5
NUDT4