ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
CCIN
MTRNR2L2
MSH3
DHFR
SPAG8
HINT2
MTRNR2L8
CDK12
STOML2
PIGO
TBC1D4
CCDC107
MED23
UBE2F
PSMB6
PEX3
ADAT2
VPS37D
PTPRF
RASA2
MTRNR2L1
ARHGEF1
ZBTB40
LPIN1
CLTA
RPS7
TRIP4
RGPD2
RGPD1
HRCT1
RNF216
INTS12
GSTCD
TRMT10A
MTTP
DMAP1
ATP5MC3
TESK1
MRFAP1L1
UTP25
TEX46
KDM1A
RPL27
ZDHHC5
H4C3
H1-6
COMMD2
AKIRIN2
UBE2L3
POLR1H
PAXX
CLIC3
AURKAIP1
RUSC2
GTF3C3
TOMM7
AHCY
RMND1
ARMT1
NFE2L2
NLRX1
TLN1
CREB3
SIT1
SIRT5
AP2A2
LRRC37A3
ARL14EP
SSBP1
TOP3B
ZKSCAN8
CLPB
GNE
SLC35E2A
DNAJC19
ZCCHC4
PDCL
PHKB
ITFG1
PSMF1
TSSC4
TRIM55
MSMP
CYRIB
IL11RA
ELP3
CD36
UBE2V2
GTF2H4
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
FAF1
SNRPB2
TRAPPC9
ARHGEF39
ZFAND1
COX7A2
CIZ1
OSCAR
NDUFA3
MT1M
MT1E
NCOA5
ATR
NDUFS7
TENT2
EIF3E
ZNF335
MRFAP1
EPRS1
RBBP5
C9orf131
MRPS14
MRPL45
RNF24
DPY19L4
ZSCAN9
UBFD1
EARS2
NR6A1
TBC1D19
KIF3B
CRYAA2
CRYAA
WDR43
WDR74
DYM
SPHK2
RPL18
FAM83E
CABLES2
GTPBP6
GBA
GPCPD1
TMEM79
SMG5
NPR2
RGP1
GBA2
GTF2H2
GTF2H2C
SLC39A11
ENGASE
MRPL58
ERCC6L2
RXRA
LFNG
SLC35B1
PANK3
PRDX1
CTNNBL1
PPP5D1
CALM3
MTERF1
AP1G1
TEF
ZER1
CRLS1
PRMT1
AARS2
STX16
TACO1
DSTYK
INKA2
DDX20
FRG2
FBXW5
C8G
RPS14
FANCG
SF3A3
FAM8A1
PLEKHM3
ZMAT2
HIBCH
PAXBP1
MELK
RAC1
TRIOBP
REXO4
ADAMTS13
PGS1
MTF2
VCP
EIF4A2
HEATR3
YWHAG
DPH5
AMZ2
CASC3
PRPSAP1
RAD52
MYCBP2
EIF1AD
BANF1
TMEM242
COMMD6
AP3S2
NFX1
COL23A1
CDK5RAP1
LOC730098
CCL27
NUDT2
KIF24
UNC13B
EDC4
RRAD
TPM2
CDC25B
RPL38
DNM2
CETP
DRG2
DDX18
RIN2
NOTCH2
SNAP47
JMJD4
ZMPSTE24
SLC28A3
CCNC
UIMC1
ADNP
EIF3D
RRP15
FBXW2
MRPL35
IMMT
MRPL39
NDUFC2-KCTD14
NDUFC2
RGS20
TFB1M
EIF3F
MEX3C
MRPL38
POLG2
RECK
CCDC88A
JAG1
PIH1D1
ALDH16A1
PPIL3
NIF3L1
ZDHHC24
ACTN3
MVB12A
ZNF638
FOXK2
NDUFAF4
KLHL32
ZKSCAN2
MITD1
ZNF165
ZBTB3
MRPL12
ASXL1
TMEM222
SMARCD2
EED
YTHDF2
HIF1AN
SMU1
MRPL44
STAT3
RPL37
ADCY4
ZSCAN16
PLEKHG2
ATF2
NOL11
MRPL3
NOTCH2NLC
SP2
FKTN
PDCL3
KCTD2
ATP5PD
PAFAH2
PDCD6
RFC5
DUX4
ZNHIT6
WDR70
NMNAT1
LZIC
GORASP2
TIMM9
KIAA0586
PCCA
ZNF8
NUTM1
NOP10
MRPL15
FXN
NUDT9
UBE4A
RNFT1
MDM4
PRLR
RSPH6A
POLR2M
P3H4
FKBP10
PSCA
H4C11
SH2B1
LUC7L2
SMCO4
DOT1L
UCHL3
PRELID2
SNRPE
TXNDC11
TANK
CARD14
ZNF461
PERM1
MSL2
CRH
C8orf37
LMAN2
COPS7A
PRICKLE3
ADM
DCP1A
RPL10A
ELFN2
VPS25
RBIS
LRRC59
FAM227B
DTWD1
CCDC200
FRG2C
KXD1
BORCS7
HLA-E
FBXO43
C19orf25
ADRM1
NUCKS1
NEURL4
ZDHHC12
RFX1
TOR1A
PLIN3
MLLT1
NPAS4
SRRD
HPS4
SLC29A3
MEF2D
SOGA1
CNN1
TJP3
SETD1A
ATG16L1
SPATA2
PRMT5
SGSM1
C1QTNF8
DLAT
TAF1C
ADAD2
LSP1
PMEPA1
EPS15
TKT
TRMT1
NACC1
TIA1
UBOX5
FASTKD5
XKR8
CAVIN1
CACTIN
ARNT
COASY
HAS1
PDE4A
STK10
HCAR3
CLPP
SERPINB1
LSM14B
TCF3
ZCCHC14
LGR6
UNC93B1
ALDH3B1
TGM2
MCC
METTL14
PLD1
PRR30
PREB
KRT15
MATR3
CEP164
MAMDC2
PDSS2
SLC25A16
MEGF9
RPL6
KDM3B
FMC1-LUC7L2
FMC1
ATF6
SPATC1L
GRSF1
SNU13
SLC27A1
SMG8
AKNA
MTRNR2L9
ZNF184
FKBPL
ATF6B
NUP85
SLC25A25
NAIF1
EIF3C
ADGRG1
PAK4
ICMT
CCNT1
LTO1
HPS6
GADD45B
CHST12
LIME1
SLC35A4
APBB3
PRR5L
COMMD9
TERF2
LIMK1
ATG4C
SCAMP4
ADAT3
PTK2B
GSN
HAX1
CNOT11
DIO1
SLC38A10
SLC30A6
ZNF77
DAGLB
TCTN3
SEPTIN9
CLUAP1
C16orf90
WDR59
AP2S1
LARP1
ZNF131
GSTA4
NAE1
SLC44A1
PTPN1
SARS2
NUF2
MRPS12
RBM4B
MKNK2
HUS1
VPS13B
NEK6
EFR3A
KANSL3
FER1L5
CDK8
PPP1R13L
POLR1G
PSMD4
ARHGAP39
RAB14
DYNC2I1
CWF19L2
ISOC2
PKD2L2
LDLRAP1
TBC1D16
NUDCD3
TDRD7
AARSD1
RPL36
OLFML2A
SLC26A8
MAPK14
PDE6B
EIF3CL
ADPRHL1
SLC31A1
PDLIM7
FKBP15
YPEL3
TBX6
ATP13A3
MRPL54
APBA3
MEGF8
TAC4
PCCB
SRXN1
RUNX3
PPP6C
MTOR
MLX
TMEM161A
SRPK1
CLK3
ILF2
GABARAPL1
CASTOR1
SPC24
TPK1
SWSAP1
WASF2
ZSCAN25
RAB4B
MIA
RAB11B
RNF213
MTBP
MRPL13
GRK1
COPS4
GLIPR1L2
CCDC22
CACNA1F
UBXN4
HPS1
ASMTL
RIF1
OR2T1
TGFB1I1
GTF2H5
SYMPK
LAPTM5
FOXA3
DCAF7
RPTN
SEC14L1
GHITM
ZZEF1
CYB5D2
CIAO3
SPAG4
CBX4
TIMM10
ADGRA2
ZNF234
RAB5B
ENSA
ST3GAL4
ZNF555
PGK1
KIF16B
NELFCD
GGCX
TIGD1
RAB5C
EIF4E2
TRIM26
CNOT3
ZC3H15
USP35
KCTD21
SLC27A4
ZNF606
SORBS1
PITPNA
RNF187
ICAM1
DAAM1
EMC4
MRI1
VPS37C
RAB2A
DPP3
SNX16
GALT
SYT11
GON4L
ERICH4
DMAC2
VKORC1
ZBTB45
DOLPP1
AP3B1
ZMYM1
TSEN54
TMEM41A
CASKIN2
RBM45
PDE11A
MTRNR2L10
PGLS
SCFD1
TEX9
RFX7
PHC2
PCBD2
NICN1
EIF5A2
UTP3
BRAP
ACAD10
FASN
RCC1
PSMD9
HPD
PCGF2
DCT
TIMM23
ZBED9
CIC
ANXA2
H6PD
HMGN4
SHFL
SEMA4B
PPP6R1
KTN1
IFNGR2
EMC8
COX4I1
ADA
DHX15
DENR
C17orf64
LMO7
SEC13
RCN1
LTBR
ADAM19
GTF2IRD2B
LSM5
AVL9
TYW1
SBDS
NDUFS5
GABPB2
SPATC1
GADD45GIP1
SYT7
ST6GALNAC4
MANBAL
RPS6
ALG10B
KLF5
TNS4
SUN1
TRAPPC3
OPA3
MAD1L1
UBE2Q1
RPL37A
MTMR14
SIRT4
COX16
TMCO6
SLC35E2B
CD14
TMEM214
RABGEF1
CDA
ABRAXAS2
GALNT10
KDSR
RNF114
LEO1
TFPT
PRPF31
INO80C
FPR1
ETFB
FBXO46
MDGA1
IQCE
DGKZ
BRAT1
TMEM18
S1PR4
BEGAIN
NIPA2
KIF2C
RS1
PPEF1
LOC112267881
COX5A
CHMP6
ELOVL6
STRA6
SNRPC
SREBF2
CYB5R4
ASF1B
PKD1L2
NCBP3
TOR1AIP2
TOR1AIP1
METRN
TTC38
TGDS
PKDREJ
GPSM2
AKT2
MT1F
MT1B
MICALL2
RIOX1
EIF2D
PLXDC1
IRGC
IER3
FLOT1
CDKN1A
OPRL1
SDAD1
EGR1
PRR5-ARHGAP8
PRR5
IL1RAP
FBXL19
SMARCC2
GRPEL2
CIBAR2
PISD
FAM200B
PRRG2
NOSIP
HIBADH
FAM168B
ARFGEF2
SLC25A20
MFSD4B
CFDP1
NCOA7
SYNGR2
STXBP3
PNPLA6
TBPL1
ST6GALNAC6
TSC1
GFI1B
NEMF
LAMP3
ZNF687
ATP5MC1
RBM12
CPNE1
TSACC
CCT3
SSBP2
TMEM51
SCGB1C2
PMM1
DPY19L1
CYLD
PKP3
ERCC1
ELAVL3
RNASE4
NME1-NME2
NME1
LPP
ANG
ZBTB43
SNX8
SCML1
MACC1
MPRIP
WIPI2
TRAF6
RAG1
GAMT
POLR3E
H4C6
OMA1
DAB1
KDM3A
PTPN4
HEXB
GEMIN6
PTPN3
LZTS3
PRRT3
CHRNA9
SPOCD1
RABGGTA
TGM3
NDUFAB1
SLC25A44
TIMM22
SIGMAR1
PHF19
YEATS2
MTR
UQCR11
MARCHF7
DEF8
USP42
ZNF572
TTC21B
PTPRA
RPS29
RBM12B
PREX1
TRIM32
ASTN2
XKR7
BRIX1
EHF
DRAM2
CEPT1
KLHL20
CERCAM
CCDC117
OSTF1
NMRK1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PRUNE1
MINDY1
INTS5
SP1
MRPS15
AGBL3
OPA1
C16orf70
CARD19
TCIRG1
NEDD1
ANGPT1
VTA1
POU2F2
NMBR
BNIP1
TDP2
NKIRAS2
DNAJC7
ACOT13
TMPRSS9
GPR160
CLCF1
ANGPTL6
PIP5KL1
PARG
CTSZ
NLRP1
LACTBL1
ZSWIM3
TRAF3IP3
ACOT8
CRTAP
TRMT2A
SMIM17
RANBP1
RPL24
ZNF500
USP45
TSTD3
MARS1
CTDSP1
ARHGAP9
TRIM45
EIF5A
EEF1AKMT1
WDR7
CDC5L
BDH1
ARHGAP24
ZFP36L1
ANKRD46
OSBP
SARDH
EHD2
CTR9
COL6A1
ZNF554
SYNJ2
TBRG4
CDYL
SH2D5
GTF2H2C_2
ID1
LMTK3
MTIF2
CYREN
PGBD2
ARSD
ALKBH3
ACOT9
ODF3L2
CCDC77
TOM1L2
DRC3
ASB6
ZNF408
MED18
CDK9
ARHGAP1
AHSG
MAP3K10
MAP2K6
ATAD2
RPN1
ROBO3
LIN28A
GNG7
WNT7B
NBN
CSDC2
EVI5L
ZFAND4
MTHFSD
IER5
SBK3
KAAG1
HM13
FCMR
DCDC2
KCTD18
C6orf226
MOSPD3
IFT46
CTPS1
TCP11L1
IP6K3
ECSIT
E2F6
XPO5
SHROOM2
POLH
PFDN2
NIT1
ARTN
C4orf48
TFAM
RAG2
IFTAP
BCAR1
SNUPN
MDFIC
GALNT11
DYNLRB1
INTS2
SMIM8
CDK11A
AMOTL1
VAT1
RND2
IQSEC3
PRCD
KDM4B
CYGB
ATXN7L2
EMILIN2
ZCCHC3
DST
BEND6
BANP
STX18
MRPS33
ANKRD13C
ADAP1
RPS20
MRPL48
RBL1
KCTD3
FUT10
GRK6
LPAR2
ABT1
RHOD
FLVCR1
COL18A1
POLG
PLEKHG4
PARP2
CDK11B
SH3GLB2
GTF3C5
ANAPC11
HEATR6
FAM220A