ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741424 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◣ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

CCIN
STOML2
CDK12
TBC1D4
CCDC107
MTRNR2L8
ZNF335
FBXO43
SPAAR
GTF2H4
MTRNR2L2
MSH3
DHFR
UBE2V2
SP2
PIGO
VPS37D
PSMB6
GTPBP6
TESK1
ARHGEF1
SPAG8
HINT2
CLPB
PAXBP1
AHCY
UBE2L3
TFPT
PRPF31
UBFD1
EARS2
FRG2
CCNC
LOC730098
CCL27
RMND1
ARMT1
PRPSAP1
EIF3E
KANSL3
FER1L5
MTBP
MRPL13
ZBTB40
COL23A1
RPL27
MSMP
CLTA
NEURL4
NLRX1
NUDT9
NPR2
TLN1
CREB3
WDR43
RUSC2
MRPL45
PTPRF
HEATR3
INKA2
DDX20
GNE
MELK
DLAT
TMEM79
SMG5
TMEM41A
MRFAP1
CRYAA2
CRYAA
TRMT10A
MTTP
PLD1
PMEPA1
CYRIB
C9orf131
PEX3
ADAT2
MRPS14
SLC39A11
SIT1
ZCCHC4
MED23
MRPL44
TGFB1I1
HUS1
TEX46
KDM1A
LPIN1
UBE2F
MRFAP1L1
STX16
TRIP4
NUF2
ATP5MC3
HRCT1
ARHGEF39
SYT7
GBA
SMARCD2
RIN2
GTF3C3
PAXX
CLIC3
DYM
TGM2
RBBP5
TPM2
SH2B1
MRPL21
IGHMBP2
ZDHHC24
ACTN3
PLIN3
ENGASE
BORCS7
LTO1
ATAD2
SOGA1
RNF24
TMEM242
TENT2
MEF2D
XKR8
SPHK2
RPL18
FAM83E
UNC93B1
ALDH3B1
FKBPL
ATF6B
ZSCAN9
ZBTB45
HAS1
ZMAT2
COMMD6
UCHL3
VPS13B
MTIF2
FBXW5
C8G
INTS2
MCC
TACO1
STX18
TOR1A
RNF114
TJP3
DNAJC19
ADNP
ADPRHL1
ATR
HLA-E
RGP1
GBA2
DCAF7
PRKAB2
CHD1L
VMAC
NDUFA11
FANCG
WDR74
DRG2
UTP25
ZBTB3
LSM14B
DPY19L4
MACC1
EPS15
TBC1D16
AARS2
UBE4A
CDC25B
ARHGAP39
PPIP5K2
GIN1
C19orf25
RPP25L
COPS7A
PIH1D1
ALDH16A1
MTRNR2L1
ZNHIT6
POLR1H
RNF216
SRXN1
RFX1
PLEKHM3
ZDHHC12
RAG2
IFTAP
CETP
RBL1
RXRA
PRMT1
PSCA
STAT3
RPS7
SLC35E2B
TMEM18
SMG8
LARP1
NUDT2
KIF24
SPAG4
EFR3A
AARSD1
PDSS2
GORASP2
TIMM9
KIAA0586
YWHAG
DUX4
KDM3A
NDUFS7
TEF
HCAR3
GPCPD1
NUP85
SYNGR2
RBM28
TOMM7
KDM3B
RAC1
NR6A1
PPP6C
COPS4
CGGBP1
C3orf38
MTF2
ZNF408
ARHGAP1
SHROOM2
PPP1R13L
POLR1G
MTOR
SLC25A25
NAIF1
SLC38A10
SIRT6
ANKRD24
CSNK1G3
EPRS1
IL11RA
NEK6
DDX1
PRR30
PREB
RBM45
PDE11A
LMO7
HPS1
MRPL39
ERCC6L2
ZMPSTE24
KIF3B
SNAP47
JMJD4
ISOC2
SF3A3
OSCAR
NDUFA3
FXN
RPS20
TTC21B
WWP1
HIBCH
BCAS3
UBOX5
FASTKD5
ZDHHC5
CCDC200
AKIRIN2
SSBP1
ICMT
CDK8
PKD2L2
TIMM10
GABPB2
ZNF165
SCAMP4
ADAT3
WDR70
MRPL12
BANP
HIF1AN
TCF3
PDLIM7
DPY19L1
TDP2
ACOT13
TNS4
TSEN54
CASKIN2
EFHD1
ITGB3BP
EFCAB7
KRT15
MEX3C
PIH1D2
NKAPD1
UBB
IPO4
SSBP2
NME1-NME2
NME1
ITFG2
ZSCAN30
WDR59
INTS12
GSTCD
NCBP3
AP1G1
FAM135A
LSP1
DSTYK
PRCD
CYGB
TRIOBP
COQ3
GRSF1
FKTN
ARHGAP24
PSMD4
ETFB
DCTN3
TBC1D19
SUGCT
MPLKIP
ETFDH
C4orf46
GAA
RPS15A
DNM2
NUDCD3
TRIM55
GTF2H2C
ZNF572
GTF2H2C_2
MRPS33
TCERG1
LOC100130520
CD300H
TATDN3
NSL1
MRPS15
C17orf64
MATR3
TUBGCP3
SNRPD3
GUCD1
PPP5D1
CALM3
TBPL1
SRRD
HPS4
MRPL38
SEC13
TRMT2A
RANBP1
SMIM8
AGPS
MRPL16
SLC27A1
RRP15
RHOD
SMU1
CABLES2
RAB11B
PSMF1
VPS25
CALM2
SLC35E2A
SIRT5
SLC30A6
FUT10
CCDC88A
STK10
DENR
BRIX1
E2F6
TUBB
NOP16
MDC1
HIGD2A
ZCCHC14
SNU13
TAF1C
ADAD2
NCOA5
EIF5A2
H4C3
H1-6
RWDD1
HIKESHI
CDK5RAP1
UNC13B
RGPD2
RGPD1
TERF2
DHX15
ALG10B
MTR
PGM1
PSMD3
CTNNBL1
GTF3C5
PPP4R3B
CCNI
CAVIN1
ELP3
SEMA4B
MRPL58
ZKSCAN8
CCZ1B
RPL37
SEPTIN7
METTL18
C1orf112
RASA2
SLC35A4
APBB3
AAR2
KLHDC8B
CCDC71
ATF6
ALKBH3
MT1M
MT1E
RECK
UBE3B
SERPINB6
ANGEL1
APPBP2
PHKB
ITFG1
SLC26A8
MAPK14
TFB1M
LIME1
AP2S1
DDX18
NDUFAB1
ZNF391
SLC2A4RG
EIF1B
CLUAP1
C16orf90
ZC3H15
TEX9
RFX7
OSBP
PGBD2
TNPO3
PTEN
KLLN
ATG16L1
CLPP
MICALL2
ZNF577
TMEM209
SSMEM1
LFNG
FUCA2
IFNAR1
MTFR1
SPATA2
DPH5
MRPL3
POLG
CIPC
SUPT7L
SLC4A1AP
LIMK1
CNOT11
ATP13A3
VTA1
NMBR
FRA10AC1
MELTF
WBP2
CSF3R
MTMR14
SEC62
TTC26
LRP6
MLLT1
ZNF184
ADGRG1
DAGLB
SLC31A1
FKBP15
MRI1
GALT
RPS6
CARD14
ZDHHC6
VTI1A
THEM4
SLC35A3
CEP164
PRELID2
TRAF6
RAG1
EIF1AD
BANF1
MOB4
PLEKHG2
ZNF131
REXO4
ADAMTS13
INO80C
FBXO46
ZSWIM3
ACOT8
NUDT15
PLS1
RPS14
DMAP1
EIF3C
EIF3CL
PITPNA
AMZ2
PRUNE1
MINDY1
NBN
MRPL48
DTD1
BRMS1
B4GAT1
TEX2
ADRM1
CERCAM
SLC7A4
NDUFB3
FAM126B
PDE7A
SMARCE1
SMCO4
NEMF
NKIRAS2
DNAJC7
NECTIN2
KCNIP3
WDPCP
MDH1
PDE4A
COX7A2
PISD
TGM3
NEDD1
SH3PXD2B
RPS11
RNF220
METTL14
EIF2D
IDH1
PDCL
CCNT1
ZNF555
C8orf37
PAFAH2
AURKAIP1
SMARCC2
AGBL3
PGS1
TMEM222
DCP1A
RNF7
PCGF2
NDUFS5
ZNF713
COPB2
COASY
MLX
PRDX1
PTK6
MBTPS2
RNF38
TCTN3
SARS2
MRPS12
RUNX3
LTBR
DRAM2
CEPT1
RIN1
MED13
C6orf89
PCCB
ERICH4
DMAC2
WDR7
VIRMA
ZNF35
RBM25
PTK2B
MEGF8
ELOVL6
TP53I11
SNRPB2
ZNF76
POLR3B
SLC18B1
C11orf49
OSGIN1
PANK3
DEF8
OPA1
SCAND1
COA1
MAMDC2
COMMD2
SIGMAR1
EIF5A
ASB6
SH3GLB2
CCDC59
NOTCH2NLA
KXD1
PRMT5
CASTOR1
KIF16B
BDH1
TMTC3
CEP290
SLC25A39
CFAP298-TCP10L
CFAP298
SLC29A3
RBM4B
GTF2H2
RNASE4
ANG
EVI5L
MDFIC
RNF187
LRRC59
ZCCHC3
NOP53
COA6
CDKN2AIPNL
TSKU
ATG4C
PTPN1
NSUN4
BHLHA9
SS18L2
SEC22C
NECAP2
ARL14EP
LMTK3
AHSG
RPAP1
SOCS3
SLC44A1
RAB5B
COX16
MITD1
SPAG16
CSTF2T
NELFCD
SNX8
ARHGEF16
WASF1
FAM214B
CDC40
GTF2H5
BCAR1
COA3
CNTD1
ARAP1
NFE2L2
STXBP3
CRH
DST
BEND6
ANKRD13C
SNRPB
DHX8
YIPF3
RNF149
POLR1C
AJUBA
SERPINB1
EED
FOXK2
UTP3
MYCBP2
MARCHF7
TSSC4
FAM133B
NPAS1
MLPH
INA
HMGCR
ZNF638
ZNF606
SYT11
GON4L
BNIP1
EIF3F
RPL26
PFDN4
UGGT1
KHDRBS3
GDAP1
RGS9
TOMM22
CEP120
TYW1
SBDS
LEO1
PTPN4
ANGPT1
PRKCA
TRIM7
UPP1
RARS1
VARS1
MYORG
C9orf24
AFG1L
NOL8
CENPP
LARS2
C1S
CWF19L2
KLF5
CIBAR2
SAR1B
SREK1IP1
DDX59
CWC27
TIA1
SCFD1
RCC1
ADAM19
TCIRG1
CCDC77
ABT1
MAFB
AGK
PRMT3
KDM5A
ZZEF1
CYB5D2
LSG1
TRIB1
MCOLN1
CCN2
ARNT
AKNA
SEPTIN9
RIF1
TIGD1
EIF4E2
IP6K3
CREBL2
TIMM23
OMA1
DAB1
STARD3NL
ZNF343
RNFT1
NDUFS3
KBTBD4
ZRANB2
BTBD10
C1QBP
KMT2A
C12orf73
BBS1
ZFAND1
CHST12
CRLS1
SLC35B1
PCBD2
PPP6R1
ASXL1
AP3S2
RBIS
SRP68
POLM
PNKD
GALR2
RTTN
TEP1
EIF4A2
CTSZ
MTHFD2L
ISY1-RAB43
ISY1
DCAF10
SRPK1
ILF2
VPS37C
TRIM32
ASTN2
CZIB
QKI
HDAC5
HASPIN
DTX4
ARID1A
SEC14L1
KTN1
PLXDC1
AMOTL1
MRPL1
CEP78
PSMB7
RAB5IF
TVP23B
TBC1D14
ACVR2A
SLC27A4
RPN1
C20orf27
SCNN1A
PPM1L
CLN5
ACYP2
LRRC37A3
FAM200B
SCML1
SAAL1
DUS1L
ZNF501
TTC32
IMPA1
DYNC2I1
HMGN4
CHRNA9
POU2F2
ANKRD46
DNAJC25-GNG10
DNAJC25
PLEKHG4
POLI
ATF2
PRDM8
ARHGEF11
CCL26
NHP2
MAP10
CARMIL1
SLC25A16
USP35
KCTD21
ROBO3
MRPS10
ZBTB7B
NR1H3
ACP2
SUCLG1
NVL
GGCX
SNRPC
ERCC1
POLR3E
VAT1
RND2
TADA1
CD36
RPS3A
ITPKC
COQ8B
RALB
BAG2
FRG2C
GSTA4
NLRP1
RPL24
CDK11B
DENND3
PEMT
CSF2
MRPS31
ZNF250
TRIM27
MAN2C1
HOXD8
HIPK1
SGSM1
RPL38
NOL11
SPATC1
TUBE1
FAM229B
REX1BD
RNF207
RPL6
GABARAPL1
TSC1
GFI1B
ZC3H6
ZSCAN26
SMG7
IREB2
MRPL35
IMMT
LAPTM5
FASN
KDM4B
MAD2L1BP
CORO1C
DSN1
TMEM8B
FAM221B
C16orf95
GTPBP2
CUL9
TEPSIN
PPP2R5B
NDUFAF8
ZNF629
TTLL7
SHLD2
GLUD1
CNTFR
NCOA7
SPOCD1
KAAG1
DCDC2
NOP14
GRK4
SNX19
PTGS2
PPM1A
KPNA2
DCAF8
NICN1
PARP2
RIPOR3
FABP6
MYH7B
GSS
H4C15
H4C14
TPRKB
RIOK1
CAGE1
ZNF674
GIP
CCDC38
BSND
AMDHD1
SYMPK
FOXA3
LSM5
AVL9
CFAP20
RSPH6A
UMAD1
SPNS1
PSORS1C2
PLEKHA6
ERGIC2
CCDC71L
CBX4
ZMYM1
OPA3
TNFRSF6B
MIF4GD
TIPIN
TUBG1
RETREG3
YARS2
USP32
COL21A1
ZNF843
VPS28
FAM83D
CHKA
MEGF9
PHC2
SHFL
SIRT4
ARL4A
TAS1R1
NOL9
SSR3
PKIA
PSMD9
HPD
BEGAIN
CARD19
CTDSP1
BORCS6
NOTCH2
PIKFYVE
THEM6
TSEN15
PALLD
USP15
OR2S2
NARF
MNAT1
KPNA5