ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX873813 | Keratinocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◣ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

KIF5C
RGPD2
RGPD1
MTRNR2L2
MSH3
DHFR
WDR74
STX5
MAMDC2
MTRNR2L8
COL23A1
MTRNR2L9
MTRNR2L1
SNAPC1
LOC102724770
DGCR6
SPAAR
HRCT1
DUX4
PTPRN2
MTRNR2L10
MUC3A
SLC35E2B
TRIM48
CACNB2
AFAP1
EMILIN2
MVK
SLC35E2A
UNC45B
NLE1
CNOT3
TLE3
MTRNR2L6
FRG2C
ZNF195
FRG2
PDE4A
EPN1
TAOK3
SUDS3
ZNF300
ARL4D
CRYAA
CRYAA2
CCDC200
PMF1-BGLAP
PMF1
SNX16
CDON
ADAMTS9
LGR6
HDAC2
USP17L8
USP17L3
RPL9
LIAS
NPDC1
ENTPD2
RANBP2
BZW2
ANKMY2
KIFC2
CYHR1
UCKL1
TARDBP
ATXN2L
FAM71E1
EMC10
SP2
GTF3C5
FAM187A
EFTUD2
CCDC103
RBM23
VPS37B
EED
FOXJ3
PHRF1
DRD4
HOMER1
ZNF285
UQCRC2
PSMD1
FUS
FOLR1
FAM53C
CDC25C
COMMD1
CCT4
OPA3
HES4
STK19
DXO
WRAP53
TP53
UFSP2
C4orf47
PPP5D1
CALM3
YY1AP1
DAP3
RALGAPA1
PIP4P1
OSGEP
APEX1
PAK1
TMEM259
CNN2
TMEM260
CFAP45
RFX1
RBKS
BABAM2
ULBP2
DCTN1
ATP1B3
MRPL23
ZNF547
TRAPPC2B
OXSR1
RPL35A
IQCG
PDXDC1
NUP205
C6orf62
POLR3F
DZANK1
GNB2
FRAT1
C19orf48
PNO1
USP17L4
USP17L1
OGA
GIT2
ANKRD13A
CMC2
CENPN
TSPAN31
CDK4
AGAP2
GOSR2
FLCN
NPAS4
PSIP1
PIK3R3
SMC2
EIF3B
STK38L
JOSD2
ASPDH
HADHB
HADHA
ZNF576
IRGQ
RHBDD3
EWSR1
ATP5MG
ZBTB21
HECA
ELL2
NVL
NOL8
CENPP
UROS
BCCIP
TCP11L2
TRMO
HINT3
FEM1A
EAPP
TBCK
AIMP1
STX4
TMUB2
FAM227A
CBY1
IQCH
AAGAB
RPS23
ATP6AP1L
UPF2
CSNK2A1
PLCD3
ACBD4
UBB
TIMM22
TAF15
EIF4A3
NUP85
REN
CACTIN
PAXBP1
PFDN4
PTDSS1
MTERF3
RPL21
STK35
SELENOW
CENPE
STAM
DHX8
FBXO48
APLF
GBA
SOST
GRIPAP1
C21orf91
PMVK
FOS
RPL19
CACNB1
PRMT1
DNMT1
TPBG
USP36
ING3
TBC1D17
AKT1S1
SUPV3L1
GARS1
UBE2B
CDKL3
KCNJ15
OLFML2A
NR6A1
IPO13
SLC35B1
RAB11B
BRAF
SRI
CDIPT
MTMR14
BCL6
TSNAX
PDAP1
BUD31
MRFAP1
NDUFA4
BCAS2
WFIKKN1
METTL26
MCRIP2
OR1F1
HGC6.3
CTDP1
TNFSF13B
GET4
RPL13
CPNE7
CHD8
ADCK5
RNF223
BRD3OS
TSEN34
TMC4
MBOAT7
OLFM1
MVD
PAM16
NOC4L
DDX51
PDX1
NCOA7
POLR3E
IFITM10
CTSD
SSBP2
UNKL
NELFB
TRIM72
PYDC1
RAB11FIP3
VCX
LAT2
PTGES2
PFKP
SLC25A41
KHSRP
PLA2G6
MUC17
WBP1L
ZNF229
B3GNTL1
PGK1
SLC19A1
TEPSIN
NDUFAF8
ZHX3
OGDH
GLIPR1L2
ZBTB37
LRTM1
ZNF541
NPR1
ILF2
DEGS2
OSGIN1
BAIAP2L1
PTP4A3
PRMT5
FER
SBNO2
TOLLIP
RER1
MORN1
C8orf37
GRTP1
GFI1B
LOXL3
DOK1
BCL2L10
DENND1B
NCALD
HEXIM1
SACM1L
SPATC1L
LRRC6
CRHR2
BTBD2
CCDC57
ANO7
RAD23B
PRR14
FBRS
ART1
GCNT3
OR4K14
MAS1
ELSPBP1
BSPH1
PHACTR3
MPZL1
KLHDC10
YJEFN3
CILP2
H4C8
RNASE4
ANG
CXXC5
MKNK2
TP73
PBX2
GPSM3
AGER
TTC16
PTRH1
SBNO1
STXBP1
LITAF
MAFK
KRBA1
RGS9
HDDC2
CREB3L3
CEBPB
CUL3
PBX1
SPI1
ZBTB32
C11orf95
OR10R2
OR10K1
MBL2
SPOP
KANK1
ULK1
TMEM86B
SP4
TRAPPC9
FST
HRH3
PRR29
COLEC10
C1QTNF7
LTA4H
PPP6R3
ETS2
ABR
GSTA4
PXDN
TECR
SSH1
DNAJB1
PSMA3
BRMS1
B4GAT1
CAPN12
TIA1
PCYOX1
IFI27L2
DICER1
DEFB129
TRIM41
IQUB
C4orf19
ZFPM1
VGLL4
USF3
CDH11
SLC36A2
CIB3
VCX2
USP22
SPRING1
RNFT2
ZNF839
NAPRT
MROH6
UBE2L5
UNK
H3-3B
SLURP2
PRELP
LYNX1-SLURP2
LYNX1
BTNL9
WEE2
ZCWPW1
PPP1R35
MEPCE
CMKLR1
MB
MDM4
LOC102723971
KASH5
CACNG4
OR2B2
H2BC17
H2AC17
ESRP1
POLG
LRRC15
NEMF
FAM89A
LUC7L2
SHF
BCAR3
B4GALNT4
RAB6A
GOLPH3
SMARCD2
NOTUM
DPP9
SCYL3
KCTD9
CDCA2
RFC5
COTL1
JRK
FZD8
MRPL58
SETDB1
PTPN9
TMEM220
PSMB3
PCGF2
CLDN34
KRTAP5-6
FAAH
SHISA9
AHRR
TIMM44
SMARCD3
CALY
EEF1A1
HSPA6
TTYH1
CDK18
ACSF3
TRIM7
HELZ2
FNDC11
SECTM1
PKD1
FIBCD1
EOLA2
EOLA1
RGS19
OPRL1
LKAAEAR1
TOR4A
SLC29A4
BCAM
LARP1
LPCAT4
ADI1
ACTA1
KRT1
CACNG6
CTDSP2
LY6E
TRIB1
KLK4
SYNGAP1
PHF1
MRC2
CUTA
C1QTNF12
THSD4
LOC101928841
CORO2A
MAP1B
UBAP2
OR10H5
OR10H1
DPEP1
CLN3
APOBR
NPRL3
ZDHHC6
VTI1A
FAM174C
EFNA2
SYT3
ATXN7
KDELR1
GRIN2D
ZNF512B
SAMD10
PRPF6
MAP1LC3B
FBXO31
POU5F1B
PRR5-ARHGAP8
PRR5
MYADML2
KLK14
AK1
TMPRSS6
VCX3B
JAGN1
IL17RE
ARF3
MTRF1
FAM240C
FTCD-AS1
MC1R
SMG7
VLDLR
SIGIRR
KRT8
MSRB2
FAM236B
FAM236A
C10orf67
FMC1-LUC7L2
FMC1
SUZ12
SPIRE2
PHLDB3
TNNT1
TNNI3
RAB11A
APOC3
APOA1
NBPF12
INTS1
C17orf58
CEP72
SLC7A2
DSTN
BFSP1
SPEF1
CENPB
CDC25B
CACNA1B
PI16
P2RX1
PRRG2
PRR12
EYS
TTYH3
PELI3
USP34
MFNG
JARID2
TLCD1
RPL23A
RAB34
NEK8
HOPX
SLC8A2
PHF21A
PDE7B
AGXT
POR
NDUFS7
NCBP2AS2
NCBP2
DYNC2I1
CCL25
FGF12
ZBTB46
BIRC7
MTMR4
LRRN3
ADAP1
TMEM65
VCX3A
CHAT
PRTG
GH1
CSHL1
BDKRB1
ARFGEF2
MZF1
MINAR1
KNDC1
CATSPERG
RASSF2
ZBED9
LCN12
FRMD6
FBXW5
C8G
PPP1R21
ZNF865
ZNF524
FIZ1
HMX1
OTOF
SP3
SNAPC4
PMPCA
ENTR1
CBLC
MBNL1
USP38
BCAS3
DNAJB8
JPH4
CMBL
RASA4B
NBPF11
INTS9
HMBOX1
TUBA1C
RPS29
C17orf64
PRLH
SLC43A2
CRELD2
ALG12
HES7
ALOXE3
KNL1
APOH
MUC20
NTMT1
NOS3
TLK1
SLC6A18
SP1
RNF43
DRC7
TSC2
SLC9A3R2
PDP2
NTHL1
NGB
USP32
TMEM121
KLK7
KLK6
WDR49
HECW2
CYB5R1
UBE3C
KCTD13
POLK
CERT1
SPACA6
MSI2
OGFOD2
NCR2
ARL6IP4
MEAK7
FOXJ2
CABP2
MLXIPL
LARGE1
APPBP2
ACTR3
CLTC
CREM
ALKAL2
TFEB
MECOM
VPS26C
PCNX1
DACT3
MYL12B
MYL12A
RNF166
CTU2
RASA4
NBPF15
NAV1
CADM4
CAP2
LAD1
ECH1
NBAS
CCDC8
CACNA1S
ASCL5
RTEL1
RSF1
AAMDC
SNRPA
FOXA2
C19orf54
C16orf72
RNASEH1
ICE1
ITPR1
MYADM
MAML3
RECQL4
NIM1K
MFSD3
LRRC14
GPT
URGCP-MRPS24
URGCP
ESPNL
BORCS6
NAP1L5
RPH3A
MCTP2
LENG9
EFCAB2
CDC42EP5
CTCFL
OVCA2
PALLD
CST3
KCNQ2
SIPA1L2
SMURF1
PIEZO1
ZNF148
TMEM18
LCN8
LCN6
LCN10
AMMECR1
SLCO3A1
HS3ST2
ZNF862
TNFRSF6B
FAM234B
ZFP41
SCYL1
GOLGA6L10
PITPNM3
STS
PUDP
MAPK11
ARID2
AP1S3
NOTCH1
SETD1A
GPR78
PARD3
OCLN
LHX3
ZNF358
VEPH1
TEX45
FBXL19
TMEM40
RAMP3
MMP15
EHD2
TMEM52
LHFPL2
KCNC3
IGLON5
GREB1
DDI2
CD164
BTNL10
MED6
SATB2
NPEPPS
PHF23
GABARAP
DVL2
CPLX2
CA4
RCAN3
FOXK1
ESRRG
TP53RK
SLC13A3
TMEM63C
SULT2B1
PCBP2
CDH22
ITIH5
ADNP
KLHL23
RASSF5
MGA
DLG2
PLXDC1
ACTRT2
NKX2-1
HTR1F
MFRP
C1QTNF5
SLC6A19
DYNLL2
KNOP1
FGFR4
PSAPL1
POU2F1
PPP1R13L
POLR1G
RRM1
NOL10
SRSF9
RTL6
DYNLL1
LRGUK
HDHD3
PDE4DIP
IL26
ZBP1
PRDM11
TXNIP
LMTK3
HMGN4
ABI1
EXOSC4
NIBAN2
ZNF205
CNPY1
STX16
NFATC4
RCL1
SEZ6
BRPF1
VARS2
SART1
KCNK15
GTF2H4
CANT1
TRIM14
IL11
FAM71E2
COX6B2
TAF6L
RTN4RL1
RAB40A
POLR2G
FBXO11
DPH1
POMC
CREBBP
ACOXL
ATP1A3
SERPINA3
PI4KB
LHX6
VNN2
PDXK
BRD2
PPM1D
DHX34
C5AR2
BBX
PIH1D1
NR5A2
ATXN1
ALDH16A1
CREBRF
SIT1
SIGLEC15
RPUSD1
CMIP
CHTF18
CCDC107
ARHGEF39
CERS4
STK3
OSR2
ZFR
AHCYL2
SKA2
SERPINB9
PRR11
HSD17B14
SH3YL1
PLXDC2
LMNB1
SKIDA1
PTPRH
MLLT10
MYMK
BCAT2
LRRN2
DPP3
APOC1
ONECUT3
VILL
PLCB1
MTRNR2L4
LAMC1
WDR45B
TMEM170A
PRSS27
LMOD2
HERC4
EDN1
DCT
LY86
GNAS
DBP
CA11
BRIP1
ADGRA1
RNF19A
BARHL1
AMZ2
SMG1
PABPC1
LIN54
GAS7
GAB2
MAP2K2
HMGB4
FCGR3A
CYP24A1
RALY
PPP1R3E
GOLGA6L7
BCL2L2-PABPN1
BCL2L2
NDUFV1
IQCE
RNF139
LOC105378979
CCDC112
KCNN4
NPIPA1
IMP4
HMGN1
CCDC115
KMT2E
NPAS3
TMEM242
LRATD2
KLK5
CCDC149
LY6H
CROCC
WDR26
TMEM119
PRAG1
MYL3
TMEM187
HCFC1
MEF2C
TSC22D1
PDCD5
AAAS
ARC
GNG8
CYP4F11
STAT6
LMBRD1
ERICH6
AGPAT2
ORAI2
GTF2IRD1
DCUN1D2
UBC
SBK3
SBK2
COMMD3-BMI1
COMMD3
BMI1
LHX9
GRHL3
CPVL
CHN2
PRKCZ
PPP2R5C
MRGPRE
RUNX1T1
BCAP31
ABCD1
PRPF40B
ORC4
MBD5
SLC25A19