ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

WDR74
MTRNR2L2
SNX16
ADAMTSL1
SPATC1L
TNFRSF19
MTRNR2L8
SP2
H4C15
H4C14
CLPB
KATNB1
DDX23
BOD1
EVI5L
H4C11
VPS50
HEPACAM2
UNK
DNM2
TMEM115
H4C3
CHMP4B
CCDC200
TCEA2
DDX49
COPE
IFRD2
RWDD1
SP1
TBL1X
PHF12
FBXL19
H2BC4
THRAP3
FEM1A
POLR3F
DZANK1
MAPKAPK5
AP2S1
H4C2
WDPCP
MDH1
TSN
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PAFAH2
GALM
CIC
SCNM1
LYSMD1
TSNAXIP1
RANBP10
ST3GAL2
PRCC
FAP
KHSRP
RBBP5
PHB
YJU2
SUCLG1
RPS20
MRPL24
BANP
NEBL
TEPSIN
NDUFAF8
DFFA
RFX1
CCDC90B
FAM168A
SMPD3
TSC2
NTHL1
IFTAP
PPRC1
LRRC29
CALR3
C19orf44
NUDCD1
TOM1L2
NCLN
DRC3
PAK1IP1
MMACHC
C6orf52
RAB5B
ZFYVE1
PPP1R12B
GSPT1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
SPSB3
NUBP2
HNRNPC
LRCH4
GATB
FBXO24
INVS
ERP44
PES1
COMMD9
SLC25A25
NAIF1
VIPAS39
AHSA1
NDC80
METTL4
MTOR
PEMT
RPS3
ZNF17
CCDC146
PIGL
COX16
ING4
ZNF417
PANK4
BMF
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
H4C12
HRCT1
PRR14
TMEM11
PIN4
SP5
SRSF11
LRRC40
PNKD
KHDC4
C16orf91
AAMP
INTS1
SF3B6
FAM228B
STIP1
NUP107
BUB1B
ZNF268
OSBP
MED27
GPR137
DDX41
GUF1
NOP16
HIGD2A
GBA
ZNF547
TRAPPC2B
TARS2
TACO1
TTI2
INTS9
HMBOX1
NUCB1
DYNC1I2
MTRF1
LARS1
TFPT
PRPF31
ELOC
ZFPL1
TMEM242
CNIH4
CDCA5
SNX17
SCAF1
RCAN1
NOC4L
EIF2B4
DDX51
SF3A3
RPS7
RABL2A
E2F4
RANBP2
GTF2H4
ZNF211
ZNF687
SYMPK
RPL32
PNPLA6
FOXA3
CYCS
NUDT13
C19orf53
NEDD8-MDP1
NEDD8
GMPR2
EHF
CRTC2
ZCCHC4
ZNF165
TSSC4
UBQLN4
LAMTOR2
TBP
STAM
PSMB1
PHB2
TMTC3
CEP290
CCNL1
ZSWIM3
KBTBD6
FCF1
COX7C
AREL1
ACOT8
TIMM21
STK25
H4C5
FBXO15
EMC4
ABT1
NUP205
METTL3
ATG4C
COMMD1
CCT4
TBL3
MRPL11
ZNF628
ZNF337
PSMB6
NDUFAF5
ESF1
DMAC1
CAND1
THOC6
HCFC1R1
BUB3
ZNF225
ZCCHC8
WDR46
SMG8
SEC11C
PFDN6
MRPL30
MITD1
NDUFS3
KBTBD4
NUF2
TCERG1
RPS6KB2
NR6A1
MICOS13
HSD11B1L
MRPL53
MRPL28
DDX39B
GPR108
OAZ3
SSBP2
SHPK
NDUFB5
MRPL47
CTNS
RHOT2
TOR1AIP1
SPHK2
SMARCAL1
SLC35E2B
RPL18
NFIB
LIN37
KRT15
GTF3C3
GSTO2
ANAPC5
ZFYVE19
VWA5A
PSMD11
HEMK1
DNAJC17
ZNF383
NPRL2
CYB561D2
C12orf43
ATP5MG
ATP5F1B
ZSCAN22
HDAC9
UBAC1
RPL14
SIRT4
AK2
ZMAT2
VRK1
GOSR2
ACTR1A
ZNF140
TRDMT1
TATDN3
NSL1
PPP1R12C
CTU1
UFD1
PSMC5
FTSJ3
CDC45
PRRG2
NOSIP
VPS25
UBR2
POLDIP3
TMEM94
STT3A
ALKBH7
SEL1L
SMARCD2
CCDC174
SLX4IP
ATP6V1G1
PEX3
FARSB
AHCYL2
ADAT2
SSR3
ZNF444
UFSP2
SIRT2
NFKBIB
CDK5RAP2
RPL37
ZNF286A
KCTD5
MRPS7
GGA3
VCPIP1
PTDSS2
C8orf44-SGK3
C1orf159
LSG1
CRADD
TIMMDC1
EFTUD2
CCDC103
SEC13
NMT1
DCAKD
SUGP1
MAU2
HEXIM2
FASTKD1
TRAPPC3
TMEM60
PHTF2
HEXA
G3BP1
CLN3
ARHGEF1
ZNF773
ZNF691
KRT23
ZNF548
GSK3A
POM121
LMAN2
AURKAIP1
CCAR2
FLAD1
EXD2
CD2BP2
ZNF500
ZC3H10
TSNAX
PDE6D
COPS7B
ZNF776
SLC8A1
RPIA
NME1
COX7A2L
BABAM1
TBC1D10B
MYLPF
SMAD3
COPS7A
VEZT
FGD6
DLGAP1
RPL18A
ZNF420
ZNF143
SART3
ISCU
FBXW11
SUPT7L
SLC4A1AP
TRAF7
RBM25
KRR1
ZNF335
SNX15
METTL26
SUPV3L1
ZNF226
LTN1
CIAO2A
H4C8
GBF1
CACTIN
SLC35B1
MRPL20
PWWP2A
TMEM63C
EIF3F
SCRIB
NBPF15
EXOC4
RNF121
LOC100133315
DYNC2I2
CTDP1
ZNF688
PEX2
EXOSC6
EIF2AK3
ZNF235
TXNL4B
DHX38
SECISBP2
MRPL21
METTL25
IGHMBP2
CCDC59
RARB
ZBTB45
SCYL3
PABPN1
THYN1
ACAD8
SRD5A1
NSUN2
UTP3
RPGRIP1L
FTO
CCDC124
DHX8
EXOSC5
BCKDHA
RGPD2
RGPD1
MTRNR2L9
MTRNR2L10
SSBP1
PPP5D1
CALM3
TOP2A
EPS15
BPNT1
CCL3
SYT7
RPAIN
NUP88
INO80C
HNRNPUL1
CAPS2
TRAPPC9
KLLN
INTS10
MYOM2
TJP3
ARHGEF2
ENPP4
CLIC5
TOMM40L
PROSER3
HSPB6
ATP2C1
KLF6
FUT10
MTRNR2L1
RAB11B
MRPS18C
HELQ
RAP2B
LNPEP
MDM2
ACTL6A
H4C4
TRIP4
CXCR5
CCL5
TMEM256
SMCO1
NCOA7
MNT
ILF2
KMT2C
EML2
DPP9
GCLC
POLG
XAB2
SKA2
PRR11
KANSL3
NDUFS7
DRAP1
C11orf68
COMMD2
USP3
MRPS23
HSD11B1
CDYL
CDC20
USP30
PSMD4
MED23
FSD2
FMO4
TP63
BBX
FOXK1
FAAP24
CEP89
CMSS1
HOOK1
AQR
RAD51AP2
C2orf42
TPST1
RAD51AP1
C16orf72
C12orf4
WBP1L
WAPL
SELENOH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
INSR
KDSR
CRB1
SPTLC3
KIF16B
TIMM22
LRRC14B
PRPF18
SLC33A1
NR1H2
CCDC77
MPND
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
COPZ1
ZNF451
TYK2
RBM28
ZNF609
TLR5
ZMYND8
RAP2A
MYCBP2
EPRS1
DHX16
CLEC7A
CHD6
PNISR
GORAB
ZSWIM1
UNC93B1
RPL35A
RAB40B
PPP6R1
IQCG
HAX1
ECT2
SLC9A1
KLHL20
DMAP1
ARNTL
ACBD4
TDRKH
LTA4H
IFIT1
MGP
TSC1
PSAP
NLK
MTFR2
GFI1B
TOMM40
TUT1
ZNF668
ZNF646
SH3GL1
DAPK3
NSMCE3
FAM207A
TFB2M
CYP2R1
CNST
CCDC61
KIF22
ITGB1BP1
CPSF3
ZBTB5
ZMPSTE24
PGP
TTC21A
RAB11A
LOC101927572
GTF2H2C
GTF2H2C_2
GORASP1
FBXO38
ALKBH6
UBE2I
RSF1
POLR2J3
AAMDC
TMEM218
GGCT
TRNAU1AP
KCNN3
KAT7
DNAJC14
CCDC167
NAA35
ATP5MC2
OSBPL2
ADRM1
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
NBEAL2
KCNH1
DDX1
CCNC
SMARCE1
ISOC2
GOLPH3L
RPS27
NUCKS1
HSD17B4
NCBP2AS2
NCBP2
MORC3
HARBI1
DCP1A
ATG13
TLDC2
TAF3
AP2M1
UBE2T
INTS4
CHD9
ZNF519
TRAPPC6A
RPL27
MRPS17
MKNK2
GABPB2
BLOC1S3
ALG10B
PRICKLE4
LRRC45
FRS3
FBXO11
CENPX
ARL1
TNFRSF17
TLR4
TAB1
NPIPB2
MLLT1
GTF2H2
FLT3LG
PSMD5
FAM72D
FAM72C
TSACC
THADA
STIL
CCT3
RABEP1
PXMP4
FBXO40
EIF4A2
PPP1R37
PARP8
LY9
GOT1
SLC39A3
RBSN
P4HB
NOTCH2
NOL6
TIPRL
SOD1
PDE12
KNL1
TPD52L2
SETD1A
UCHL5
RPL26
RO60
PRDM10
GPR89A
FBXO8
CEP44
AFF3
PMVK
KAT6A
ZSWIM4
WWOX
TRMT2A
TRAF3IP3
SMG6
RER1
RANBP1
PRMT5
PIK3C2A
MORN1
BARHL1
STK17A
LARP4
RUVBL1
KLHDC10
REEP6
PCSK4
EPS8
DNAJC24
DCDC1
CASP8AP2
ATF7IP
RFX5
MAP1LC3B2
PHF1
OPA3
HUS1
LOC645177
C12orf77
PSMD3
OAT
NOTCH1
WDR24
NELFB
ATP5MC1
TRUB2
LAX1
ETV5
COQ4
CDK5RAP3
ATG5
ACTR2
TMEM259
MRPL1
UFC1
DNAJC19
KDM4D
CWC15
ZNF443
PM20D1
TMCO1
RGS1
NIP7
COG8
CLDN2