ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
WDR74
CCIN
MTRNR2L2
MSH3
DHFR
SPAG8
HINT2
CDK12
STOML2
PIGO
MTRNR2L8
CCDC107
TBC1D4
MED23
UBE2F
PSMB6
PEX3
ADAT2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PTPRF
VPS37D
RASA2
MTRNR2L1
ARHGEF1
ZBTB40
LPIN1
CLTA
RPS7
TRIM48
RGPD2
RGPD1
RNF216
HRCT1
TRMT10A
MTTP
TRIP4
INTS12
GSTCD
ATP5MC3
UTP25
RPL27
TESK1
DMAP1
TEX46
KDM1A
COMMD2
H4C3
H1-6
MRFAP1L1
AKIRIN2
POLR1H
AURKAIP1
ZDHHC5
CLIC3
GTF3C3
TOMM7
UBE2L3
RMND1
ARMT1
RUSC2
AHCY
NFE2L2
FRG2C
SIT1
TLN1
CREB3
LRRC37A3
AP2A2
SIRT5
ARL14EP
NLRX1
SSBP1
ZKSCAN8
TOP3B
CLPB
SLC35E2A
ZCCHC4
DNAJC19
GNE
PDCL
PHKB
ITFG1
MRPL45
PSMF1
TSSC4
MSMP
TRIM55
MT1M
MT1E
GTF2H4
CYRIB
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
ARHGEF39
ZFAND1
IL11RA
SNRPB2
TRAPPC9
OSCAR
NDUFA3
COX7A2
CCDC200
RBM39
RBBP5
ATR
ZSCAN9
CD36
ZNF335
MRFAP1
EIF3E
MRPS14
EPRS1
KIF3B
NR6A1
UBFD1
EARS2
RNF24
ELP3
TBC1D19
WDR43
DYM
CABLES2
FAF1
SLC39A11
NCOA5
C9orf131
GBA
NDUFS7
TMEM79
SMG5
GTF2H2
NPR2
ERCC6L2
UBE2V2
ENGASE
TENT2
PPP5D1
CALM3
DPY19L4
LFNG
CTNNBL1
TEF
SLC35B1
RGP1
GBA2
MTERF1
SPHK2
RPL18
FAM83E
TACO1
PANK3
PRDX1
MAD1L1
SLC9A1
DSTYK
PRMT1
STX16
FANCG
FRG2
AARS2
RPS14
REXO4
ADAMTS13
MRPL58
FBXW5
C8G
TRIOBP
HIBCH
PLEKHM3
INKA2
DDX20
ZMAT2
VCP
RXRA
YWHAG
SF3A3
AMZ2
EIF4A2
CASC3
EIF1AD
BANF1
CRLS1
MYCBP2
DUX4
MELK
DPH5
GPCPD1
AP1G1
ZER1
COL23A1
PRPSAP1
NUDT2
KIF24
FAM8A1
NFX1
LOC730098
CCL27
TMEM242
UNC13B
RRAD
PAXBP1
DRG2
RPL38
RAC1
CETP
TPM2
MTF2
RIN2
DDX18
COMMD6
ZMPSTE24
SNAP47
JMJD4
RAD52
SLC28A3
CCNC
ADNP
FBXW2
MRPL35
IMMT
CDK5RAP1
RRP15
TFB1M
DNM2
MRPL39
EIF3F
NDUFC2-KCTD14
NDUFC2
RECK
EDC4
AP4E1
NOTCH2
EI24
CDC25B
PDE4DIP
ZNF638
NDUFAF4
KLHL32
MVB12A
UIMC1
EIF3D
MRPL12
MRPL30
MITD1
ZKSCAN2
RGS20
POLG2
YTHDF2
ASXL1
ZNF165
TMEM222
SMU1
SMARCD2
SEC22B
ZBTB3
EED
MRPL44
MRPL38
STAT3
RPL37
ADCY4
ZSCAN16
PLEKHG2
HIF1AN
NOL11
MRPL3
ATF2
CCDC88A
JAG1
PIH1D1
ALDH16A1
FKTN
SP2
ZDHHC24
ACTN3
FOXK2
ATP5PD
PDCL3
PAFAH2
WDR31
ZNHIT6
GORASP2
WDR70
PDCD6
ALG10B
PCCA
ZNF8
FXN
UBE4A
NUTM1
NOP10
RNFT1
NUDT9
CIC
PSCA
POLR2M
P3H4
FKBP10
SH2B1
SNRPE
DOT1L
PECAM1
UCHL3
SMCO4
LUC7L2
PRELID2
MDM4
TANK
TXNDC11
ZNF461
PERM1
PLCD3
MSL2
ACBD4
C8orf37
RSPH6A
LMAN2
CARD14
PRICKLE3
COPS7A
FAM133B
DCP1A
ADM
DPEP1
ELFN2
RPL10A
LRRC59
FAM227B
DTWD1
MAMDC2
SNX16
KXD1
BORCS7
HLA-E
FBXO43
C19orf25
ADRM1
MTRNR2L9
NUCKS1
NEURL4
ZDHHC12
RFX1
MUC3A
TOR1A
PLIN3
GOLM2
NPAS4
MLLT1
SRRD
HPS4
MEF2D
SLC29A3
CNN1
TJP3
SPATA2
ATG16L1
SETD1A
PRMT5
SGSM1
C1QTNF8
SOGA1
TAF1C
ADAD2
DLAT
PMEPA1
CLPP
TIA1
UBOX5
FASTKD5
LSP1
TRMT1
NACC1
CAVIN1
TKT
EPS15
XKR8
COASY
HCAR3
PDE4A
HAS1
ARNT
STK10
LSM14B
ZCCHC14
TCF3
UNC93B1
ALDH3B1
PLD1
CACTIN
TGM2
KRT15
METTL14
MCC
LGR6
CEP164
FKBPL
ATF6B
MATR3
PRR30
PREB
FMC1-LUC7L2
FMC1
PDSS2
SLC25A16
ZNF184
MEGF9
ATF6
KDM3B
NUP85
SMG8
GRSF1
AKNA
EIF3C
SLC27A1
SPATC1L
RPL6
SLC25A25
NAIF1
GADD45B
WDR59
PAK4
LTO1
CCNT1
SLC30A6
LIMK1
CHST12
DAGLB
ADGRG1
ICMT
LIME1
SARS2
MRPS12
HAX1
SLC35A4
APBB3
TERF2
HPS6
CNOT11
PRR5L
COMMD9
ATG4C
SCAMP4
MTRNR2L10
ADAT3
SNU13
ZNF77
GSN
TCTN3
SEPTIN9
AP2S1
TRIM41
LARP1
SLC38A10
CLUAP1
C16orf90
DIO1
ZNF131
GSTA4
RBM4B
NAE1
SLC44A1
CDK8
CWF19L2
NUF2
TBC1D16
PPP1R13L
POLR1G
MEX3C
PTPN1
PTK2B
EFR3A
SRXN1
RAB14
NEK6
KANSL3
FER1L5
EMILIN2
EIF3CL
RAB11B
LDLRAP1
SLC31A1
FKBP15
PKD2L2
NUDCD3
TDRD7
ARHGAP39
PSMD4
RPL36
OLFML2A
AARSD1
YPEL3
TBX6
PDE6B
MRPL54
APBA3
PDLIM7
MTOR
ADPRHL1
ATP13A3
PPP6C
TAC4
SLC26A8
MAPK14
VPS13B
RUNX3
CASTOR1
TMEM161A
ILF2
MLX
PCCB
SCGB1C2
SCGB1C1
CLK3
MEGF8
WASF2
SRPK1
GABARAPL1
HUS1
TPK1
SPC24
GTF2H5
ZSCAN25
RIF1
PCBD2
MTBP
MRPL13
RAB4B
MIA
UBXN4
ZFAT
RNF213
MKNK2
SWSAP1
GLIPR1L2
CCDC22
CACNA1F
COPS4
DPP3
TMEM41A
SPAG4
HPS1
TGFB1I1
NELFCD
PSMD9
HPD
PSMB3
PCGF2
GRK1
CIAO3
ZZEF1
GHITM
CYB5D2
LAPTM5
KLHDC9
RPTN
ST3GAL4
CBX4
SYMPK
FOXA3
DAAM1
PITPNA
KIF16B
DYNC2I1
ZC3H15
OR2T1
ENSA
ZNF555
TIGD1
EIF4E2
ZNF234
TIMM10
TARS2
RNF187
ZNF606
SPATC1
GGCX
ADGRA2
SLC27A4
TRIM26
RAB5B
SORBS1
SYT11
GON4L
ICAM1
VPS37C
USP35
NCBP3
KCTD21
MANBAL
RAB2A
EMC4
MRI1
METRN
DOLPP1
ZNF551
PHC2
AP3B1
ZBTB45
IQCE
NICN1
PGK1
TSEN54
CASKIN2
TIMM23B
PARG
IFNGR2
ERICH4
DMAC2
ZMYM1
TEX9
RFX7
UTP3
ISOC2
EIF5A2
ZBED9
SEC14L1
RCC1
FASN
SCFD1
BRAP
ACAD10
LSM5
GADD45GIP1
AVL9
TBPL1
EMC8
COX4I1
LMO7
DCT
GK5
ANXA2
H6PD
PPP6R1
SIRT4
SEMA4B
LTBR
ADAM19
TNS4
DHX15
C17orf64
NDUFS5
DENR
RCN1
KTN1
UBE2Q1
SEC13
GRPEL2
SYT7
RPS6
SUN1
ETFB
ATP5MC1
RABGEF1
RAB5C
RPL37A
KLF5
GABPB2
COX16
TYW1
SBDS
ELOVL6
TRAPPC3
TIMM9
ST6GALNAC4
KIAA0586
FBXO46
INO80C
STRA6
SLC35E2B
TMEM214
GALT
KDSR
RNF114
ADA
RS1
PPEF1
MTMR14
TMEM18
ABRAXAS2
FPR1
LEO1
PKD1L2
SNRPC
LOC112267881
CYB5R4
TTC38
PKDREJ
CHMP6
GPSM2
BEGAIN
COX5A
GALNT10
MT1F
MT1B
EGR1
HMGN4
ASF1B
TRMT2A
TGDS
RANBP1
KIF2C
IER3
FLOT1
CDKN1A
LACTBL1
DGKZ
DHX16
MDGA1
HIBADH
RIOX1
PRRG2
NOSIP
SDAD1
TOR1AIP2
TOR1AIP1
TFPT
PRPF31
IL1RAP
FAM168B
SLC25A20
MICALL2
VKORC1
CTR9
ARHGAP24
STXBP3
FAM200B
SMARCC2
PLXDC1
MFSD4B
PGLS
AKT2
PRR5-ARHGAP8
PRR5
TSACC
CCT3
BCL9
NEMF
ZNF687
TSC1
OPRL1
GFI1B
CFDP1
TMEM51
LPAR2
RBM12
FBXL19
CPNE1
EIF2D
MPRIP
ELAVL3
PMM1
ERCC1
ECSIT
RPN1
LPP
SYNGR2
RBM45
PDE11A
TOM1L2
DRC3
GEMIN6
DPY19L1
SHFL
RNASE4
ANG
TMCO6
CHRNA9
CD14
SSBP2
PKP3
MCM7
DEF8
AP4M1
SNX8
NIPA2
LZTS3
PISD
MACC1
BRIX1
ZBTB43
SPOCD1
PTPN3
POLR3E
H4C6
GAMT
SCML1
NME1
CIZ1
SIGMAR1
RBM12B
NDUFAB1
MARCHF7
CYLD
PTPRA
HEXB
TRIM32
ASTN2
LAMP3
KDM3A
WIPI2
OPA3
PTPN4
TRAF6
RPL13
RAG1
CDA
SLC12A9
NLRP1
KLHL20
EPHB4
SLC25A44
DRAM2
CEPT1
CCDC117
YEATS2
UQCR11
MTR
MRGBP
C16orf70
PRUNE1
MINDY1
PRKCA
TIMM23
TCIRG1
RPS29
PRKAB2
PPIL3
NIF3L1
CHD1L
USP45
TSTD3
ZNF572
XKR7
AGBL3
CLCF1
OSTF1
OPA1
NMRK1
EHF
EEF1AKMT1
CERCAM
BNIP1
MRPS15
ANGPT1
ZSWIM3
SP1
PREX1
ACOT8
S1PR4
MARS1
ARHGAP9
TTC21B
RPL24
ZNF500
EIF5A
SYNJ2
POU2F2
PHF19
MAD2L1BP
NEDD1
INTS5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TRIM59
TDP2
ACOT13
ZNF554
VTA1
NMBR
GPR160
CDC5L
C1orf198
NKIRAS2
DNAJC7
CARD19
EHD2
CTSZ
REXO5
PIP5KL1
ERI2
RCAN1
CRTAP
ID1
WDR7
SMIM17
MED18
CTDSP1
BDH1
TRIM45
LIN28A
TRAF3IP3
ANKRD46
CIBAR2
LMTK3
CCDC77
ZNF582
OSBP
ZNF408
ARHGAP1
AHSG
ARTN
SH2D5
MAP3K10
TATDN1
OMA1
NDUFB9
DAB1
CDK9
ACOT9
IRGC
ITGB3BP
EFCAB7
ATAD2
ASB6
MAP2K6
EVI5L
BCAR1
NCOA7
GNG7
FCMR
MDFIC
PGBD2
IER5
HM13
C6orf226
SHROOM2
SARDH
KCTD18
FOSL2
NUDT8
MTIF2
ROBO3
NBN
ODF3L2
CTPS1
ZFP36L1
TMCC1
NIPA1
DST
C8orf76
BEND6
ALKBH3
CSDC2
WNT7B
KAAG1
IQSEC3
DCDC2
CRYAA
CRYAA2
IFT46
RAG2
IFTAP
ZFAND4
ZCCHC3
VAT1
RND2
GALNT11
USP42
TRIM7
MRPS33
RABGGTA
MTHFSD
E2F6
SBK3
ATXN7L2
PFAS
CTC1
C4orf48
BANP
PNPLA6
IP6K3
ARFGEF2
ANKRD13C
COL6A1
AMOTL1
ADAP1
NEMP2
MOSPD3
GTF3C5
RPS20
QKI
COL18A1
PFDN2
NIT1
INTS2
TFAM
STX18
PLEKHG4
C1QTNF1