ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741424 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◣ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

CCIN
STOML2
MAMDC2
WDR74
CDK12
TBC1D4
CCDC107
ZNF335
FBXO43
SPAAR
GTF2H4
UBE2V2
MTRNR2L2
MSH3
DHFR
CCDC200
PIGO
MTRNR2L8
SP2
VPS37D
PSMB6
ARHGEF1
TESK1
CLPB
SPAG8
HINT2
AHCY
UBE2L3
PAXBP1
TFPT
PRPF31
MRPL45
UBFD1
EARS2
LOC730098
CCL27
PRPSAP1
MTBP
MRPL13
CCNC
EIF3E
RMND1
ARMT1
KANSL3
FER1L5
ZBTB40
COL23A1
CLTA
FRG2C
RPL27
RBM39
MSMP
NEURL4
NLRX1
NUDT9
TLN1
CREB3
RUSC2
NPR2
WDR43
PTPRF
GNE
INKA2
DDX20
TMEM79
SMG5
MELK
TRMT10A
MTTP
SIT1
C9orf131
DLAT
TMEM41A
MED23
MRFAP1
PLD1
CYRIB
PMEPA1
FRG2
PEX3
ADAT2
MRPL44
MRPS14
ZCCHC4
SLC39A11
HUS1
TRIP4
STX16
TGFB1I1
TEX46
KDM1A
LPIN1
UBE2F
MRFAP1L1
SYT7
HRCT1
NUF2
ATP5MC3
ARHGEF39
EI24
RIN2
GBA
SMARCD2
GTF3C3
ZDHHC24
ACTN3
CLIC3
DYM
SH2B1
RBBP5
DUX4
TGM2
ATAD2
MRPL21
IGHMBP2
RNF24
TPM2
ENGASE
UNC93B1
ALDH3B1
XKR8
LTO1
ZBTB45
PLIN3
BORCS7
TENT2
SOGA1
TMEM242
ZSCAN9
ZMAT2
MEF2D
SPHK2
RPL18
FAM83E
COMMD6
UCHL3
FKBPL
ATF6B
DNAJC19
ADPRHL1
HAS1
ADNP
VPS13B
FANCG
MTIF2
STX18
FBXW5
C8G
MCC
INTS2
TOR1A
TACO1
RGP1
GBA2
TJP3
DPY19L4
RNF114
ATR
GOLM2
TBC1D16
VMAC
PPIP5K2
NDUFA11
PRKAB2
CHD1L
HLA-E
DRG2
UTP25
POLR1H
C19orf25
LSM14B
ZNHIT6
RAG2
IFTAP
EPS15
ZBTB3
MACC1
UBE4A
RPP25L
RPS7
AARS2
MTRNR2L1
ARHGAP39
STAT3
CDC25B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CETP
RNF216
RXRA
TEF
COPS7A
RFX1
PLEKHM3
PIH1D1
ALDH16A1
SRXN1
EFR3A
PDE4DIP
SPAG4
PRMT1
ZDHHC12
HCAR3
SLC35E2B
PSCA
TMEM18
RBL1
NDUFS7
LARP1
SYNGR2
GPCPD1
SHROOM2
SMG8
NUDT2
KIF24
SEC22B
PDSS2
YWHAG
GORASP2
ZNF408
ARHGAP1
NR6A1
TIMM9
KIAA0586
KDM3A
NUP85
PECAM1
TOMM7
IL11RA
CGGBP1
C3orf38
AARSD1
RBM28
KDM3B
NEK6
PPP6C
MTF2
LMO7
RAC1
COPS4
MTOR
KIF3B
PPP1R13L
POLR1G
SLC25A25
NAIF1
SLC38A10
SIRT6
ANKRD24
CSNK1G3
DDX1
RPS20
HIF1AN
EPRS1
AKIRIN2
BCAS3
PRR30
PREB
BANP
UBOX5
FASTKD5
SF3A3
RBM45
PDE11A
MRPL39
ERCC6L2
ZDHHC5
ZMPSTE24
SNAP47
JMJD4
ZNF165
HPS1
OSCAR
NDUFA3
ISOC2
MRPL12
MAIP1
PDLIM7
ZFAT
TTC21B
WWP1
FXN
MUC3A
HIBCH
CDK8
PKD2L2
SSBP1
ICMT
TIMM10
GABPB2
IPO4
WDR59
SCAMP4
ADAT3
FAM135A
NCBP3
WDR70
TCF3
DPY19L1
ARHGAP24
DNM2
TNS4
NME1
ITGB3BP
EFCAB7
COQ3
PIH1D2
NKAPD1
KRT15
TSEN54
CASKIN2
EFHD1
TATDN3
NSL1
MEX3C
ETFDH
C4orf46
UBB
TBC1D19
SSBP2
TDP2
ACOT13
ZSCAN30
INTS12
GSTCD
ETFB
DCTN3
AP1G1
LOC100130520
CD300H
LSP1
FKTN
TRIM55
PRCD
CYGB
TRIOBP
DSTYK
SLC9A1
TBPL1
CABLES2
ZNF572
GRSF1
NUDCD3
C17orf64
MRPS15
TCERG1
SUGCT
MPLKIP
GAA
CALM2
SIRT5
GTF2H2C_2
GTF2H2C
SMU1
MRPS33
RPS15A
H4C3
H1-6
SNRPD3
GUCD1
RWDD1
NCOA5
MATR3
PPP5D1
CALM3
TUBGCP3
MRPL16
SRRD
HPS4
SLC27A1
RAB11B
PSMD4
DENR
GTF3C5
AGPS
TRMT2A
RANBP1
VPS25
SLC35E2A
MRPL38
RRP15
PSMF1
RHOD
STK10
TARS2
PSMD3
NOP16
HIGD2A
AP2S1
SEC13
MRPL58
FUT10
CCDC88A
TAF1C
ADAD2
SLC30A6
BRIX1
TUBB
MDC1
ZCCHC14
CDK5RAP1
NOTCH2
GTF2H5
EIF5A2
EIF5A
SMIM8
TERF2
SEMA4B
EIF1B
CLPP
TEX9
RFX7
CRYAA
CRYAA2
SERPINB6
UNC13B
RGPD2
RGPD1
ATG16L1
SNU13
ZNF131
ALG10B
MTR
E2F6
PPP4R3B
PGM1
PTEN
KLLN
ELP3
DHX15
ZKSCAN8
MRPL3
CIPC
CCNI
KLHDC8B
CCDC71
CTNNBL1
CLUAP1
C16orf90
RPL37
IFNAR1
CCZ1B
METTL18
C1orf112
RASA2
SPATA2
ALKBH3
SEPTIN7
LRP6
CAVIN1
DAGLB
SLC35A4
APBB3
NDUFAB1
MELTF
AAR2
ATF6
CNOT11
ATP13A3
ANGEL1
PHKB
ITFG1
MT1M
MT1E
OSBP
UBE3B
KCTD10
ZNF391
APPBP2
TFB1M
DMAP1
LIME1
SLC31A1
FKBP15
RECK
RPS6
SLC2A4RG
EIF3C
EIF3CL
SLC26A8
MAPK14
DDX18
INO80C
ZSWIM3
ACOT8
TNPO3
PLS1
LIMK1
ZC3H15
CARD14
MICALL2
VTA1
NMBR
PGBD2
TRIM7
FUCA2
PLEKHG2
TTC26
ZNF577
NDUFB3
FAM126B
TMEM209
SSMEM1
ADRM1
LFNG
FBXO46
POLG
SUPT7L
SLC4A1AP
MTFR1
PDE4A
DPH5
CSF3R
METTL14
COX7A2
SEC62
ZDHHC6
VTI1A
CEP164
THEM4
ZNF184
ADGRG1
MTMR14
EIF1AD
BANF1
FRA10AC1
WBP2
DTD1
MLLT1
GALT
PRELID2
TRAF6
RAG1
BRMS1
B4GAT1
NUDT15
SLC35A3
ZNF35
REXO4
ADAMTS13
PITPNA
PRDX1
CERCAM
PTK6
MOB4
TRIM48
RPS14
MRI1
AMZ2
PRUNE1
MINDY1
NBN
MRPL48
TEX2
SMARCE1
COASY
SMCO4
MLX
NEMF
NKIRAS2
DNAJC7
MED13
WDPCP
PDE7A
MDH1
NECTIN2
RNF220
OSGIN1
OPA1
KCNIP3
SH3PXD2B
SLC7A4
RPS11
RNF38
PDCL
ZNF555
ZNF551
SMARCC2
EIF2D
SIGMAR1
NEDD1
TGM3
CFAP298-TCP10L
CFAP298
TMEM222
SLC29A3
C8orf37
MDFIC
IDH1
CCNT1
CASTOR1
RNF187
PAFAH2
GTF2H2
ZNF713
MBTPS2
RNF7
COPB2
TCTN3
NELFCD
AURKAIP1
AGBL3
ASB6
SARS2
MRPS12
RUNX3
PCCB
NDUFS5
WDR7
DCP1A
RIN1
C6orf89
C11orf49
TRIM41
PTK2B
ERICH4
DMAC2
LTBR
ELOVL6
DEF8
VIRMA
SLC18B1
SS18L2
SEC22C
PANK3
DRAM2
CEPT1
NOP53
RBM25
COMMD2
SH3GLB2
SCAND1
ARHGEF16
TP53I11
METTL25
CCDC59
SNRPB2
ZNF76
KXD1
MEGF8
FAM133B
LMTK3
POLR3B
YIPF3
POLR1C
PSMB3
PCGF2
EVI5L
BCAR1
ZCCHC3
WDR31
TMTC3
CEP290
COA1
SLC25A39
CDKN2AIPNL
PRMT5
KIF16B
ZNF606
STXBP3
DST
BEND6
DHX8
ATG4C
RBM4B
NFE2L2
RNASE4
ANG
BDH1
NSUN4
CSF3
COA6
TSKU
NECAP2
ZNF638
PTPN1
SYT11
GON4L
ARL14EP
BNIP1
RPAP1
TOMM22
RAB5B
PISD
LRRC59
AHSG
SOCS3
SLC44A1
HMGN4
BHLHA9
SREK1IP1
CWC27
ARAP1
COX16
RPN1
TCIRG1
MRPL30
MITD1
SPAG16
UPP1
CSTF2T
SAR1B
WASF1
CDC40
AKNA
KLF5
ANGPT1
OMA1
DAB1
ANKRD13C
SNRPB
FAM214B
MYORG
C9orf24
BTBD10
DDX59
SNX8
MARCHF7
TSSC4
CRH
PFDN4
RNF149
CCN2
AJUBA
EED
UTP3
MYCBP2
EIF3F
COA3
CNTD1
MLPH
NPAS1
ISY1-RAB43
ISY1
HMGCR
GDAP1
FOXK2
LEO1
TRIB1
DCAF10
CEP120
ZFAND1
SLC27A4
TYW1
SBDS
ASXL1
RPL26
VARS1
PEMT
RGS9
NOL8
CENPP
KHDRBS3
INA
C1S
TIA1
CWF19L2
PCBD2
PTPN4
PRKCA
CIBAR2
C20orf27
SCFD1
SIRT4
CCDC77
ABT1
RARS1
MAFB
LARS2
PRMT3
MCOLN1
KDM5A
LRRC37A3
RCC1
ADAM19
LSG1
NDUFS3
KBTBD4
CEP78
SRP68
PNKD
AGK
GALR2
BBS1
TIGD1
EIF4E2
FAM200B
IP6K3
C1QBP
CREBL2
CRLS1
SEPTIN9
ZZEF1
CYB5D2
SPATC1
USP35
KCTD21
RBIS
STARD3NL
ZRANB2
ZNF343
KMT2A
SGSM1
CHST12
RIF1
PPP6R1
CD36
RNFT1
NR1H3
ACP2
CCDC71L
C12orf73
SLC35B1
ILF2
GABARAPL1
EIF4A2
CTSZ
MRPS10
CZIB
CCL26
CSF2
RTTN
TRIM27
TEP1
MTHFD2L
HDAC5
SRPK1
GK5
KTN1
VAT1
RND2
RNF207
ZNF501
RAB5IF
GUSB
TVP23B
DTX4
RPL6
GSTA4
SEC14L1
NIPA1
DNAJC25-GNG10
DNAJC25
AMOTL1
QKI
DUS1L
NHP2
HASPIN
ARID1A
ACYP2
ACVR2A
SCML1
RPL24
SAAL1
DSN1
MRPL1
PSMB7
CUL9
ZNF250
TBC1D14
PPM1L
VPS37C
TRIM32
ASTN2
POLI
SCNN1A
TTC32
GIP
CLN5
ARNT
PLXDC1
CHRNA9
POU2F2
ANKRD46
PLEKHG4
ATF2
PRDM8
KDM4B
MAP10
IMPA1
CARMIL1
NICN1
MAD2L1BP
ROBO3
GTPBP2
ARHGEF11
COL21A1
SUCLG1
NVL
CHKA
GGCX
ZBTB7B
TSGA10
PSORS1C2
MAN2C1
BAG2
SLC25A16
LSM5
AVL9
ERCC1
POLR3E
NLRP1
TADA1
DENND3
RPS3A
TMEM8B
FAM221B
SSR3
RALB
PKIA
MTF1
HOXD8
TRMT1
NACC1
LAPTM5
PHC2
SHFL
NIPA2
TAS1R1
NOL9
TUBE1
FAM229B
USP15
ITPKC
IREB2
COQ8B
COG2
MRPL35
IMMT
CBX4
NOL11
RPL38
TSC1
GFI1B
ZC3H6
ZSCAN26
TEPSIN
NDUFAF8
USP32
TPRKB
TOE1
MUTYH
HIPK1
BSND
CORO1C
REX1BD
SMG7
MRPS31
ZNF629
TTLL7
SRSF7
SHLD2
KPNA2
GLUD1
DCAF8
CDC37L1
PDCL3
FASN
TIMM23
CTPS1
KAAG1
DCDC2
NOP14
GRK4
SNX19
C16orf95
PTGS2
SPNS1
PPM1A
CNTFR
SPOCD1
PPP2R5B
RIOK1
CAGE1
H4C4
ERGIC2
SYMPK
FOXA3
DYNC2I1
KDSR
SNRPC
OPA3
PARP2
ADAR
RIPOR3
MDM4
VPS16
PCED1A
MYH7B
GSS
PDE2A
CFAP20
H4C14
RSPH6A
ZNF674
UMAD1
PLEKHA6
MNAT1
H4C15