ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5576459 | E8.5 embryos
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◣ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Txndc11
Nfat5
Hnrnpa0
Nfyb
Kat6a
Ctnna1
Zfp341
Pxmp4
Cldn34d
E030030I06Rik
Hsp90aa1
Stat3
Vangl2
Sspn
Stat1
Hspe1
Hspd1
Syp
Tlx2
Pcgf1
Mob4
Prr14l
Depdc5
Pfdn4
Cyp24a1
Nkx2-6
Il31ra
Slc35b2
Hsp90ab1
Alx3
Dmbx1
Abca3
Abca17
Cd209a
Gpr84
Fabp4
Ski
Slc14a2
Smc2
Pou3f1
Ssbp2
Dnajb7
Xpnpep3
St13
Arl4d
Pdgfrb
Cdx1
Skor2
Tbc1d14
Amotl2
Kif2c
Greb1
Fbxw4
Slc32a1
Slc35e2
Lyl1
Kpna1
Six2
Ttc28
Sim2
Tal1
BC107364
Gtf3c6
Dlx1
Hmx3
Hmx2
H3c6
H2bc8
H2ac8
H1f3
Prepl
Camkmt
Hsph1
Kifc1
Gm4312
Gm4307
Gm4305
Gm4303
Gm4302
Gm4301
Tex14
Abhd6
Zbtb4
Slc35g3
Polr2a
Tmem125
Hspa8
Kifc5b
Fam90a1b
Apoo
Ssbp3
Gm51573
Egr1
Taf12
Gmeb1
Pitx1
Eapp
Six3
Mafa
Foxe1
Prdm14
Zcwpw2
Azi2
Uspl1
Tmem107
Acot7
Runx3
Foxd4
Otx1
Pde10a
Bub3
Ubb
St3gal4
Cerk
Tfap2c
Nr5a1
Raet1e
Raet1a
Tbx2
Lhx6
Ubc
Fam53c
Cdc25c
Vax1
Sirt4
Serpinh1
H3c15
H3c14
H2ac19
H2ac18
Alx1
Tlx1
Taf4
Pradc1
Gad1
Cct7
Hdac2
Foxi3
H2bc6
H1f4
Prdm16
Dnaja1
Treml4
Setx
Mecom
Lhx2
Fcgr3
Evx1
Sim1
Hnrnpa2b1
Cbx3
Gm4981
Dux
Irx3
Hoxc10
Hoxc11
Fus
Ubfd1
Ears2
Calm1
Hspa1b
Sox9
Pura
Polk
Fermt1
Cert1
Mnd1
Isl2
Dlx4
Csrnp2
Zfp536
Stap2
Mpnd
Hoxb3
Hoxb2
Gtf2a1
Actb
Tfrc
Id4
Barhl1
Hoxb6
Hoxb8
Hoxb7
Nabp1
Tlx3
Prkra
Pjvk
Barx1
Rnaset2b
Rnaset2a
Flt1
Shisa3
Pik3r2
Ifi30
Aldh1a2
Stip1
Slc41a3
Mettl1
Eef1akmt3
Cyp27b1
Ccdc134
Tmem18
Etfrf1
Casc1
Dnajb1
Plau
Foxl2
Vax2
Rita1
Pcif1
Ddx54
Hoxd3
Hoxd8
Rnf220
Napepld
Zfp523
Tmem50a
Syf2
Rsrp1
Chordc1
Ube2b
Magohb
Cdkl3
Tma7-ps
Ttc39d
Osr2
Stag1
Ppig
Hmgn2
Zpbp2
Ikzf3
H4c2
H4c1
H3c2
H3c1
H2ac4
Srsf3
Rax
Ifnz
H3c3
H2bc3
Gm13290
Gm13289
Gm13285
Gm13279
Gm13278
Gm13277
Gm13276
Gm13272
Dnajb9
Hnf1b
Aasdh
Zc3hav1l
Poldip3
Extl3
Vipas39
Pdgfra
Cct8
Ccdc194
Ahsa1
Tubgcp6
Hdac10
Olfr890
Ncl
Guf1
H4c14
Zfp959
H3c13
H2bc18
Vsx2
Lbx1
Commd1
Cct4
Wt1
Tspan13
Neurod2
H2bc4
H2ac6
G3bp1
Atox1
Ntn1
Zfp146
Alx4
Speer4f1
Jtb
Ssu72
Satb2
Nkx2-4
Tti2
Pts
Zfp568
Hmx1
Osbpl9
Hddc2
Sphk2
Spaca4
Scd4
Rpl18
Phf6
Fam83e
Dhh
AW549877
Eif4g3
H4c11
Pnpla8
C1ql1
Ap3m1
Adk
Samd10
Prpf6
Zfp512b
Hoxc12
Tmem163
Tbx5
Ralyl
Btbd6
Hoxc6
Hoxc5
Prdx1
Pax5
Gbe1
Fkbp4
Bmpr1a
Tubb2b
Onecut2
Gsx2
Ccdc117
2410002F23Rik
Pctp
Cyp2d34
Paip2b
Dnajb12
Aars2
Ube2q1
Chrnb2
Zfp873
Rpl22l1
Mrpl2
Klc4
Cul7
Eef2
Dapk3
Trim27
Rrp1
Nr2e1
Gm10499
Foxf1
H4f16
H2aj
Anks1b
Trim39
Mylip
Btbd9
Ndufs1
Eef1b2
Xrn2
Slc25a29
Selenot
Emx1
Prdm13
Eomes
Mafb
Itgb1
Deaf1
Tdrp
Slc25a38
Sgf29
Wdr4
Thumpd1
Ndufv3
Hmgb2
Aunip
Zdhhc3
Tfap2e
Pxt1
Plod2
Kctd20
Exosc7
Gpam
Sp6
Snrnp70
Odc1
Klf14
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Gdf7
H3c11
H2bc22
H2ac22
H1f5
Ero1a
Pax7
Kctd9
Hpse2
Cdca2
Ciart
BC028528
Cenpv
H60b
Rdm1
Slc9a1
Slc30a3
Mvk
Mmab
Jund
Iqcn
Prox1
Carmil1
Ahsa2
H2bc14
Ubxn7
Ier5l
H3c10
H2bc13
H2ac13
Nup153
Cul5
Unk
H3f3b
Txn1
Rps19bp1
Ncaph
Itpripl1
Atf4
Acin1
1700123O20Rik
Utp15
Tsc22d1
Tmem70
Stmn1
Stag3
Mto1
Gpc2
Gal3st4
Eloc
Ebf1
Cpe
Cgas
Ankra2
2700062C07Rik
Oaz1
Nup133
Dlx3
Dennd6a
Gm9758
Vcpkmt
Otp
Mtx3
H4c18
H4bc24
H2bc23
H2ac24
H2ac23
Cbr3
Asxl1
H1f2
Yap1
Mcph1
Fam174c
Cirbp
Shc3
Hand1
Sfi1
Eif4enif1
Seh1l
Map2k2
Creb3l3
Pcnp
Trmt10c
Dusp1
Cfl1
Tbx4
Rxylt1
Rps20
Specc1
H4c4
H3c4
H2bc7
H2ac7
Mthfsd
Foxl1
Foxc2
Gnal
Trim2
Hoxa13
Umps
Hoxa11
Plcg1
Elavl2
Ankrd60
Tmed3
Rbm47
Maco1
Idh3b
Tiparp
Teddm1a
Glul
Dars
Crot
Gm2237
Hnrnpab
Foxc1
Mfsd14a
Lmx1b
Speer4d
Asph
Pigz
Ccdc62
9130401M01Rik
Secisbp2
Mllt3
Cks2
Nhlh2
Myl4
Cdc27
Tmem30b
Npy
Nefl
Phox2b
Haus4
Dmrt1
Ebf2
Wbp4
Elf1
Zfp24
Nolc1
Nipa2
Cck
Nkx3-2
Hmbs
H2ax
Esrrb
Dpagt1
Eif4b
Ywhaq
Zfand2a
Nfyc
En1
Hoxa7
Txnrd3
Srrd
Rae1
Prex2
Pax2
Mta2
Hps4
Hoxa9
Hoxa10
Bcl6
Akap8
Polg2
Ddx5
Cep95
Spata13
Olig2
Mios
Ddx59
Gm3739
Ppdpf
Maff
Gabpb1
Rft1
Zfp800
Prpf19
Cers2
Anxa9
Ppwd1
Cenpk
Zglp1
Tmem131l
Rrp1b
Hsf2bp
Dennd6b
Fbxo46
Bhmg1
Mtf2
Zic4
Rasgrf1
Ubqln1
Tdp2
Irx2
Cwc22
Cacnb4
Acot13
Sidt1
Rps3a1
Rabep2
Prdm6
Mrps28
Kbtbd6
Cbln1
Maml3
Nt5c3
Flywch1
Esyt2
Cnpy1
Bves
Wac
Ikzf1
Arpp21
Zfp518b
Onecut3
Atp6v0c
Dmrt3
Amdhd2
Rap2a
Acan
Irx5
Pou6f1
Tmem39b
Rasef
Wtap
Sox14
Trim47
Usp40
Rbm6
Ptgfrn
4930453N24Rik
Stard6
H2-Ab1
Fgf5
4930503L19Rik
Hikeshi
Gmnn
Gm5796
Hs3st6
Tbr1
Sp9
Rpl23
1700001P01Rik
Ebf3
Zfp513
Snx17
Eif2b4
Crocc
Edn1
Rbmxl2
Hsf1
Grin2b
Bop1
Larp4
Wnt1
Tfap2b
Rcor1
Gata5
Fgf15
Irx1
Zdhhc6
Vti1a
Tbc1d5
Senp8
Pax1
Myo9a
Slc16a14
Creb1
Spata18
Sgcb
Olfr806
Wwox
Hexb
Aadacl2fm1
Kmt2a
Gm525
Setd4
Cbr1
Dnm2
Pacsin1
Slc25a17
Cdh12
Apeh
Vmn2r4
Tecpr1
Lrrc18
Pknox1
Acvr1b
Cdrt4
Tanc1
Bglap2
Bglap
Olfr1274
2410141K09Rik
Pmp22
Hoxa4
Gm12789
Plcd1
Olfr785
Gm21119
Gm15319
Tmem267
Muc3
Csf2ra
4930467E23Rik
Hoxa6
Hoxa5
Uqcrc1
Gm3411
Rex2
Olfr1020
Olfr1019
Gm5458
Themis3
Zc3h11a
Zbed6
Gsdma2
Gm3488
Gm3317
Pald1
Aldh9a1
Plekha7
Smim22
Rogdi
Mfap1b
Zfand5
Tas2r117
Zfp600
Gm13212
Gm10406
Clcn4
Tmem196
Gnptab
Oasl1
Tcf25
Gm3636
H2az2
Hus1
Olfr1354
Taar6
Hoxc8
Gm21190
Wnt5a
Tyw3
Cryz
Nlrp4a
Trp53rkb
Gm5795
Kcng4
Gpbp1l1
Tm2d1
Patj
Cfap44
Ctnnal1
Slc12a6
Cpeb4
Adipor2
Hoxb4
Pkdcc
Tfpi2
Pes1
Serpina3b
Wfdc21
Heatr6
Gm12500
Ampd2
Cpa3
Gm14444
Pheta1
Pcdh20
Cox8c
Ccdc171
Gm10710
Dchs2
Sympk
Tomm5
Gm3752
Lss
Golim4
Olfr535
Vil1
Zp3r
Cxcl12
Tff3
Gm3012
Gm10413
1700123K08Rik
Gse1
Gm5797
Tmem211
Kif27
Zfp944
Zfp758
Tent5c
Slco1a6
Frem1
Speer4e
Mx1
Ralgapa1
Olfm2
Olfr782
Papss1
Mga
Mcpt2
Avpr1a
Olfr1166
Zfp426
Tarm1
Olfr168
Alpl
Lekr1
Col6a6
Adh5
Olfr297
Gm3005
Stra6l
Gzmk
Gm10354
Tas2r114
Tas2r105
Tas2r104
1810037I17Rik
Igsf5
Rgs12
Krtap5-3
Rbfox2
2610042L04Rik
Olfr373
Olfr167
Vmn2r102
Tnfsf15
Rsad1
Dut
Vmn1r15
Pla2g12b
Ccl20
Hopx
Smim8
Acacb
Shroom3
Ccdc158
Ube2q2
Grid2
Osbpl1a
5430403G16Rik
Nit2
Incenp
Defb39
Tmem68
Tgs1
Gm2956
Agtpbp1
Serpinb12
Dscc1
Spopl
Wdr11
Lmtk2
Gm10324
Gosr2
Kitl
Ranbp9
Nt5dc3
Eprs
Olfr102
Olfr101
Olfr100
Tmem69
Abl1
Uxs1
Olfr414
Cst9
Mrpl23
Smarcad1
Commd6
Cilk1
Pcgf6
Olfr372
Atg5
Vps33a
Map3k20
Usp17lc
Sh3bp2
Ppp2r3a
Olfr792
Noct
Slc5a4a
Rbmy
Pla2g12a
Gm21708
Gm21704
Gm21693
Gm21677
Zfp69
Naip5
Nsfl1c
Plekhf2
Olfr1249
Spint2
Rap1b
Gxylt2
Depdc1a
Rpn2
Pramel30
Gm3376
E2f1
Cldn7
Gtf2ird2
Zfp937
Copz1
Tdpoz9
Olfr1032
Olfr1031
Twistnb
Clca3b
Arsg
Rab11fip2
Gsg1
Usp6nl
Lama3
Rab1a
H2-T3
Zfp945
Olfr697
Mtmr7
Nemf
Mrgbp
Spc25
Olfm1
Rnf10
Pigm
Coq5
Olfr645
Olfr644
Dcdc2a
Cfhr2
Zap70
Cyyr1
Sdk2
Drc7
Ankar
Tube1
Mmp20
Fam229b
Prl3c1
Akap7
4930433I11Rik
Ubl4b
Rsph14
Rab36
Crybg1
Dnmbp
Olfr819
Gpr52
Eif3h
Dennd1b
Zyg11a
Chd2
Enc1
Vmn1r232
Rasgrp4
Fzd10
Dynlrb1
Mab21l2
Crygf
Taar7a
Gskip
Atg2b
Cnot2
Prl2a1
Togaram1
Klhl28
Sec62
Rap1gds1
Plcxd1
Olfr1402
Sdha
Ccdc127
Usp37
Lysmd3
Gm13271
Dyrk1a
Cnot9
Cald1
St6galnac1
Olfr849
Srgn
Nepn
Gopc
Ccrl2
Pspc1
Nphs1
Nipal1
Nap1l4
Krtap29-1
Gng12
Crygc
Crygb
Zswim7
Ttc19
Nxph2
Gm4064
Gm10352
Gm10256
Slc19a2
Dlgap5
Pgbd1
Arhgap27
Zfp143
Marcks
Pigyl