ChIP-Atlas: Target genes

Potential target genes for Chd4

Query protein: Chd4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4403305 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Chd4's Target genes

◢ Chd4: Average

◢ SRX398107: 3134

◢ SRX398108: 3134

◢ SRX3660753: Bone Marrow Cells

◢ SRX3660754: Bone Marrow Cells

◢ SRX1815509: B cells

◢ SRX1815523: B cells

◢ SRX1205897: CD4 CD8 double negative cells

◢ SRX3660751: CD4 CD8 double negative cells

◢ SRX3660752: CD4 CD8 double negative cells

◢ SRX099380: CD4 CD8 double positive cells

◢ SRX099383: CD4 CD8 double positive cells

◢ SRX1838110: Cerebellum

◢ SRX1838111: Cerebellum

◢ SRX1838112: Cerebellum

◢ SRX1838113: Cerebellum

◢ SRX3548187: Embryonic heart

◢ SRX3548188: Embryonic heart

◢ SRX3548189: Embryonic heart

◢ ERX2604520: ES cells

◢ ERX2604521: ES cells

◢ ERX2604522: ES cells

◢ ERX2604523: ES cells

◢ ERX2604531: ES cells

◢ ERX2604591: ES cells

◢ ERX2604630: ES cells

◢ ERX2604635: ES cells

◢ ERX3764069: ES cells

◢ ERX3764079: ES cells

◢ ERX3764085: ES cells

◢ ERX3764087: ES cells

◢ ERX3764096: ES cells

◢ ERX3764110: ES cells

◢ SRX047142: ES cells

◢ SRX047143: ES cells

◢ SRX2007463: ES cells

◢ SRX2007464: ES cells

◢ SRX2007465: ES cells

◢ SRX333583: ES cells

◢ SRX4403302: ES cells

◢ SRX4403303: ES cells

◢ SRX4403319: ES cells

◢ SRX4403325: ES cells

◢ SRX4403331: ES cells

◢ SRX695697: ES cells

◢ SRX333563: iPS cells

◢ SRX333571: iPS cells

◢ SRX333575: iPS cells

◢ SRX333579: iPS cells

◣ SRX4403305: mESC derived neural cells

◢ SRX3729453: NIH/3T3

◢ SRX398246: Pro-B cells

◢ SRX398247: Pro-B cells

◢ SRX3660787: Scid.adh.2c2

◢ SRX3660788: Scid.adh.2c2

◢ DRX003661: Th1 Cells

◢ DRX003662: Th2 Cells

◢ SRX333553: Unclassified

◢ SRX333558: Unclassified

◢ Chd4: STRING

Greb1
Clcn4
Txndc11
Igfbp4
Nkx2-6
Exd1
Chp1
Cldn34d
Rnf216
Mis18bp1
Rad23a
Dand5
Gadd45gip1
Kcnab1
Ctcf
Polr2e
Sec63
Oscar
Ndufa3
Lsp1
Olfr806
Dusp7
Cep164
Bace1
Ctnnb1
Pnpla6
Ccdc13
Rad54l2
Man2b2
Ndufb8
Hif1an
Mansc1
Borcs5
Zfp786
Zfp398
Abhd6
Heatr5a
Cnnm3
Nck1
Hexb
Cox8c
Srf
Cul9
Stx3
Tjp2
Kdm3b
Ctdsp1
Sec24b
Cenps
Zfp335
Ddx19a
Zfp560
Ppp4r2
Hapln2
Zdhhc6
Vti1a
Nsfl1c
Dnmbp
Taf5
Wdr36
Acsf3
Sec22c
Atp8b1
Kpna1
Snrpd1
Esco1
Cdkn2d
Kcnn3
R3hdm4
Kiss1r
Med16
2210016L21Rik
Bspry
Wdr31
Ankrd1
Adnp
Cfap45
Lcn12
Fbxw5
C8g
Egfl7
9430069I07Rik
Prrt3
Hps1
Sfi1
Eif4enif1
Mdfic
Drg2
Piezo1
Osbpl1a
Fra10ac1
Fcgr3
Cers2
Anxa9
Slc6a6
Mkrn2os
Mkrn2
Gtf3c3
Mterf1b
Rabepk
Tysnd1
Map3k14
Zfp583
Dap
Aqp1
Stra8
Aebp1
Ramac
Mrpl54
Apba3
Cstf2t
Mterf1a
Use1
Slc9a1
Rfwd3
Mogs
Wbp1
Ino80b
Calm3
Ech1
Lgals6
Lgals4
Frg2f1
Foxj3
Foxk2
Gal
Cdkn2aipnl
Nans
Herc4
Niban2
Kif20b
Setd4
Cbr1
Rnf10
Coq5
Vmn2r102
Ubr4
Hexim2
Baiap2l1
Clpb
Pfas
Ctc1
Snx15
Sac3d1
Prpsap1
Fam50b
Slx4
Phospho1
Zfp105
Trappc9
Wwox
Zpr1
Bud13
Apoa5
1700034J05Rik
Cyp21a1
Zfp771
Hrob
H3f3c
Ndufaf1
Rwdd2b
Ltn1
Nbr1
Pxn
Tmem242
Tiparp
Morn4
Pex3
Adat2
Prune1
Mindy1
Tmem167b
Trim27
Taf13
Cpt1b
Chkb
Cnot10
Pik3ip1
Prss22
Fbxw4
Myrf
Acsl1
Med23
Aadacl2fm1
Cdc42bpg
Zfp566
Zfp260
Dcaf10
Agk
Ncam2
Mrpl16
St6galnac6
Chek2
Slc25a12
Slc35a4
Apbb3
E230025N22Rik
Pcbd2
Dnah2
Snrnp27
Macroh2a2
Sec11c
Slc9a8
Zcchc4
Exoc6b
Kcnmb3
Gstm7
Gstm6
Timm44
Fut10
Sdhaf3
Scmh1
Gsto2
Gsto1
Slk
Rfc5
Zfp11
Tesmin
Mecom
Prkab1
Smg9
Rbm27
Dnajb8
Lrrn4cl
Lars
Coro7
Dnaja3
Sh3pxd2a
Rps6ka2
Car13
Plcd3
Acbd4
Hrk
Cdkl3
Ube2b
Ap4e1
Sympk
Foxa3
Ilf2
Npr1
Tpgs2
AW554918
Fam3c
Rxfp1
Nuf2
Mmaa
Zbtb39
Mkrn3
Pi4k2a
Gm13285
Gm13290
Gm13289
Ppp1r14b
Fkbp2
Plcb3
Gm13279
Gm13278
Gm13275
Gm13287
Gm13288
Brd3os
Atg9b
Abcb8
Atl3
Them4
Zscan21
Rit2
Ube2l3
Rimbp3
Plekhn1
Klhl17
Pfkfb3
Ppib
Ifi203
Dmap1
Cdk5rap1
Il17ra
Nudt17
Tprkb
Nat8f1
Gip
Garre1
Rab7
Thra
Med24
Irf2
Tgif1
Dpy19l4
Apc
Fbxo47
Rgs20
Cnnm1
Scrn3
Cir1
Plvap
Rbm20
Lzts2
Twnk
Mrpl43
Utp3
Wdr64
Opn3
Chml
Cacnb3
Prune2
Map3k20
Trerf1
Dnm1
Nup205
Rapgef1
Casq1
Limd1
Rapgef2
Pxmp4
Zfp341
Sh3glb2
Miga2
Crebl2
Ssc4d
Zp3
Mrps33
Erc2
Adssl1
Acot7
C330018D20Rik
Creb3l3
Crbn
Pcgf5
Ston1
Ncam1
Cerk
Prss16
Hgsnat
Gsdme
Smco2
Ing4
Bend3
Rsbn1
Efhd1
Rpl7a
Med22
Surf6
Surf2
Surf1
Nipsnap2
Mrps17
Ap1ar
Vhl
Olfr16
Ifnz
Gm13272
Rtn4
Saraf
Leprotl1
Rundc1
Ptges3l
Aarsd1
Hus1
Entpd7
Cwf19l2
Supt5
Scarb2
Ncbp3
Gprc5a
Prokr2
Ms4a15
Klhl20
Stk40
Lsm10
Rnf135
Bmper
Thrsp
Itgb3
Gtdc1
Ifi204
Klra22
Klra15
Brf2
Coro1a
Slx1b
Bola2
Plppr2
Shfl
Zfp647
Rfx7
Slc1a4
4930503B20Rik
Ccdc136
Tab1
Neurl1a
Olfr524
Ascl4
Slc39a4
Cpsf1
Decr1
Chd1l
Pop7
Gigyf1
Lrch1
Mtg1
Boll
Jade1
Slc12a6
Nutm1
Nop10
Mbd4
Ift122
Mllt6
Mt4
Il31ra
Bbx
Stx18
Atf7
Kcp
Hemk1
6430571L13Rik
Xk
Tnk2
Ddost
Mtf2
Ccdc88a
Dusp1
Abr
Rtkn
Dhrs9
Cd5
Haspin
Rbpms2
Tmem179
Foxq1
Mrvi1
Prrg2
Nosip
Saal1
Saa3
Zfp385a
Vps13d
Hook2
Junb
Nptxr
Pbrm1
Gnl3
Tfap4
Ccdc57
E130311K13Rik
Cenph
Ccnb1
Baiap2
Adamts7
Anxa1
Cpne2
Ap3s2
Rrp1
Hspe1
Hspd1
Tmbim6
Rbm14
Gm21992
Zcchc2
Cxcl17
Gm13276
Mterf4
Rpn1
Tlcd1
Rpl23a
Nek8
Nme1
Lst1
Ltb
Ddx47
Tmem191c
Rab11fip5
Scp2
Aif1
Gm19774
Dctpp1
Psmg2
Cep76
Slc35f1
Zfp672
Sh3bp5l
Cldn3
Fgd3
Nxph3
Tjp3
Pip5k1c
Suclg1
Ninj2
Unc45a
Hddc3
Ankef1
Fancd2os
Brk1
Gdf15
Slc35b4
Nav1
Clca4a
E030030I06Rik
BC107364
Cidec
Rhou
Tenm4
Rpusd3
Pcx
Tmem270
Cldn13
Pdzd7
Sfxn3
Tmeff1
Ankrd24
Tex14
Sirt6
Rad51c
Guf1
Unc13d
Paqr5
Tgm2
Tead4
Prr22
Nrtn
Dus3l
Csgalnact1
Rnf183
Foxo6
Erich6
Tekt2
Adprhl2
Syne1
Fem1a
Smim8
Twf2
Syt12
Mpp4
Usp17le
Agtrap
St7
Rhot1
Nol4l
Bcar1
Lbh
Sf1
Spx
Srebf1
Gls2
Adamts9
Sfr1
Iars2
Bpnt1
Rbms2
Mrpl39
Tma16
Tmem211
2900026A02Rik
Ythdf2
Ggct
Thap4
Tmem203
Ndor1
Alg8
Rnf208
Ccl11
Irak2
Ube2j2
Acad9
Madd
Nr1h3
Got1
Brd7
Sesn2
Ywhaq
Btc
Ttc23l
2210010C04Rik
Hjurp
A730008H23Rik
Rpf1
Magohb
Snx2
Wdr1
Cd109
Ccdc88b
Cttnbp2nl
Fbln2
4930564D02Rik
Ccdc71l
P3h1
AU022252
Tmem269
Srp19
Gpatch3
Gpn2
Nfkb2
Cdk13
Gpcpd1
Bola3
Cnn3
Adam17
Acad12
Eif2b2
Acox2
Commd2
Ly6g6f
Abhd16a
Trmt5
Slc38a6
Ctsw
Efemp2
Ldb1
Hipk2
Trim8
Amotl2
Creb5
Adgrl4
3830406C13Rik
Ccbe1
Pde2a
Ano1
Pdgfc
Serpinb1c
Col17a1
Nup54
Ssbp1
Card19
Tatdn2
Blnk
Spink7
Unk
H3f3b
Asb6
Cltc
Chd3
Shmt2
Ndufa4l2
Mkx
Pxdn
Lims1
Rabif
Col16a1
Tatdn3
Nsl1
Kif5c
Mrpl3
Ifna13
Pramel32
Ccnd3
Taf8
Msi1
Alms1
Ntn5
Crocc2
Piwil4
Cstdc2
Lhx6
Fam71f1
Champ1
Alkbh3
Otud7b
Smim14
Mei4
Wdr70
Gtf2h2
Tes
Ttyh3
Tet3
Itgb4
Mndal
Ccl20
B230219D22Rik
Rab33b
Ethe1
Dgkz
Rad18
Tspan5
Prokr1
Gucy2g
Ptgir
Ankrd66
Ppia
Mrps16
Dnajc9
Ulk2
Pxylp1
Proc
Kmt2a
Mapk9
Slc27a1
Nxnl1
Tmem221
Gjc1
Ppp2r3a
Cbfb
Ablim3
Stom
Trim40
Pde4a
Zfp839
Mok
Elac1
Nfat5
Hsp90ab1
Pak1ip1
Slc35b2
Asxl2
Dipk1a
Necap2
Spata21
Lama5
Spry1
Braf
Tgfbi
Grap
Cav1
Tmem74
Got2
Ndst1
N4bp2
Snap47
Jmjd4
Fblim1
Aoc3
Gm34531
Gne
Zfp184
Eef1akmt2
Abraxas2
Gtpbp10
Ppp1r1b
Thap3
Phf13
Gcfc2
Acaa2
Fut7
Abca2
Lzts1
Kpnb1
Nmt2
Sema4g
Zmat5
Uqcr10
P2ry14
Gpatch8
Ybey
Mcm3ap
Exd2
Tmem131
Exosc5
Ipo11
Dimt1
Cog7
Bckdha
Sox2
1110002E22Rik
Mrpl58
Gm13277
Arrdc2
Pxk
Neto2
Odf2l
Klhl21
Nsmce1
Apba1
Capzb
Slc22a4
Lpcat2b
Btbd8
Mrpl44
Olfr1274
Chordc1
Mesp1
Nt5c3b
Klhl10
Mob4
Rai1
Neu3
Myef2
Slc4a2
Cdk5
Kcnh1
Wdr60
Eif2s3x
Gdpd5
Cnn1
Tspan11
Asic3
Pfkfb1
Apex2
Cfap44
Btn2a2
Tln2
Sec13
Nt5m
Cops3
Lpin3
Zhx3
Ets1
Ap1g1
E2f5
Fchsd2
Smim26
Dtd1
Rbm28
Prrg4
Ppa2
Slc25a24
Sirt1
Socs1
1110051M20Rik
Tnfrsf13b
Muc4
Gstt4
Dynap
Cdhr3
Tomt
Lamtor1
Anapc15
Abl1
Fam83a
Rasip1
Izumo1
Dyrk1a
Frmd4a
Pcolce2
Atp2c2
Klf4
Tram1
Sec22b
Tmem51
Notch2
Anxa5
1810062G17Rik
Klhdc4
Mob1b
Medag
Ltbp3
Sh3glb1
Prkag2
Eif3c
Dock6
Smad7
Myof
Rhbdl2
Wnt5b
C3ar1
Myoz3
Edc4
6430548M08Rik
Ccn6
Fbxl14
Prelid3a
Prdm9
Cd34
Ch25h
Zbtb20
Fbxw8
Ncaph
Itpripl1
Tecpr1
Efna4
Elovl6
Atxn7l3
Lin7c
Tmem106a
Mx1
Cd300lb
Pate1
Lrr1
Wdsub1
Rps29
Cutc
Cox15
Slc33a1
Ube2q1
Chrnb2
Dus1l
Gramd1b
Ank1
Ints3
Fnip2
Ccn5
Tlr4
Spink13
Dnajc11
Slc24a1
Ints14
Lrrc32
Sun2
Csk
Dek
Dnmt1
Spsb2
Tpi1
Rasl10a
Gas2l1
Avpi1
Pdzd9
Mosmo
Rab17
Mefv
Secisbp2l
Xylb
Galk2
Cops2
Shq1
Ago1
Cfl1
Csde1
Repin1
Zfp775
Gm5111
Hmgcll1
Tas2r143
Tas2r135
Ankrd46
Psmf1
Psmg3
Nab1
Arl8b
Mfsd13a
Diaph1
Kank2
Nptn
Asb16
Selplg
Ahrr
Naa11
Crabp1
Rorb
Il33
Mlip
Mettl9
Pkn3
Srgap1
Get1
Ralb
Mnat1
Dennd4b
Apold1
S100a10
Smim4
Nt5dc2
Rcor2
Ptpn22
Gm829
Zfp74
Acacb
Adcy7
Zfp212
Nsmce4a
Spty2d1
Scnn1a
Golim4
Snx25
Ahnak2
Gtsf1
Gsg1
Thsd4
Cyp19a1
Cbfa2t2
Rilpl1
Tmed2
Mrps18c
Helq
Mex3a
Slc35a3
Anxa11
Gas8
Dbndd1
Sema3c
Cav2
Hdac9
Ccdc91
Pml
Ermp1
Stard10
Faap20
Myo10
Rpp38
Tas1r1
Nol9
Atad1
Lztr1
Tnp2
Prm3
Prm2
Zbtb48
Atp8b3
Podxl2
Tmprss11f
Trp53rkb
E2f2
Abhd18
1700034I23Rik
Tcf3
Sema4b
B4galnt1
Hacd2
Slc26a10
Exoc7
Bves
Prpf4