ChIP-Atlas: Target genes

Potential target genes for Chd4

Query protein: Chd4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3660752 | CD4 CD8 double negative cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Chd4's Target genes

◢ Chd4: Average

◢ SRX398107: 3134

◢ SRX398108: 3134

◢ SRX3660753: Bone Marrow Cells

◢ SRX3660754: Bone Marrow Cells

◢ SRX1815509: B cells

◢ SRX1815523: B cells

◢ SRX1205897: CD4 CD8 double negative cells

◢ SRX3660751: CD4 CD8 double negative cells

◣ SRX3660752: CD4 CD8 double negative cells

◢ SRX099380: CD4 CD8 double positive cells

◢ SRX099383: CD4 CD8 double positive cells

◢ SRX1838110: Cerebellum

◢ SRX1838111: Cerebellum

◢ SRX1838112: Cerebellum

◢ SRX1838113: Cerebellum

◢ SRX3548187: Embryonic heart

◢ SRX3548188: Embryonic heart

◢ SRX3548189: Embryonic heart

◢ ERX2604520: ES cells

◢ ERX2604521: ES cells

◢ ERX2604522: ES cells

◢ ERX2604523: ES cells

◢ ERX2604531: ES cells

◢ ERX2604591: ES cells

◢ ERX2604630: ES cells

◢ ERX2604635: ES cells

◢ ERX3764069: ES cells

◢ ERX3764079: ES cells

◢ ERX3764085: ES cells

◢ ERX3764087: ES cells

◢ ERX3764096: ES cells

◢ ERX3764110: ES cells

◢ SRX047142: ES cells

◢ SRX047143: ES cells

◢ SRX2007463: ES cells

◢ SRX2007464: ES cells

◢ SRX2007465: ES cells

◢ SRX333583: ES cells

◢ SRX4403302: ES cells

◢ SRX4403303: ES cells

◢ SRX4403319: ES cells

◢ SRX4403325: ES cells

◢ SRX4403331: ES cells

◢ SRX695697: ES cells

◢ SRX333563: iPS cells

◢ SRX333571: iPS cells

◢ SRX333575: iPS cells

◢ SRX333579: iPS cells

◢ SRX4403305: mESC derived neural cells

◢ SRX3729453: NIH/3T3

◢ SRX398246: Pro-B cells

◢ SRX398247: Pro-B cells

◢ SRX3660787: Scid.adh.2c2

◢ SRX3660788: Scid.adh.2c2

◢ DRX003661: Th1 Cells

◢ DRX003662: Th2 Cells

◢ SRX333553: Unclassified

◢ SRX333558: Unclassified

◢ Chd4: STRING

Clcn4
Cdkn2d
Cldn34d
Hjurp
A730008H23Rik
Samd9l
Trappc9
Pa2g4
Ddx20
Mis18bp1
Tbc1d23
Mterf1a
Med23
Relb
Opn3
Chml
Mterf1b
Drg2
Zfyve1
Chmp5
Bag1
Zfp13
Zscan10
Ddx47
Mcrs1
Slc39a13
Oma1
Klhl20
Dusp23
Ccar1
Rsf1
Aamdc
Trim34a
Il31ra
Gtf2h4
Mrpl44
Ggt5
Pcbp2
Muc3
Raly
Smim8
Nsun6
Ccdc77
Zfp41
Eid2b
Zfp560
9530077C05Rik
Kifap3
Aqr
Tmtc3
Cep290
Espn
Hes2
Gcdh
Ppif
Acp2
Polr2e
Vrk1
Tchp
Ero1b
Rbm34
Fbxo46
Bhmg1
Tekt2
Adprhl2
Scfd1
Ap1s1
Dcp1a
Pafah2
Ahctf1
Icos
Btrc
Cast
Hif1an
Serpinb9
Mfsd8
Kpna1
Pot1b
Zfp113
Cops6
Galk2
Cops2
Dusp12
Thumpd2
Zdhhc6
Vti1a
Atp5g2
Ap2s1
Tmem139
Casp2
Nol11
Slc33a1
Get1
Zfp619
Sgpl1
Dynlt1b
Sgca
Ppp2r5d
Timm13
Zfp317
4930430F08Rik
1700017N19Rik
Ext2
Ppp1r12b
Psmd3
Ttc4
Haus6
Iffo2
Cnot10
Zcwpw2
Azi2
Nek4
Evi5l
Med27
Elp3
Fam227b
Dtwd1
Dtwd2
Eif2d
Psmc4
Tox4
Rab2b
Cd101
Hibadh
Pigo
Fdxacb1
1110032A03Rik
Dctpp1
Ctla2a
Tpbpa
Asnsd1
Asdurf
Hspbp1
Them4
Gfm1
Wdfy2
Rbm28
Cox14
Heatr1
Zfp90
Ddx52
Hexb
Wdr60
Gm11127
Mrnip
Spdye4b
Rbak
Pcnx4
Inpp5f
Txlna
Rhbdd1
Ppp1r8
Cbwd1
Plekhb1
Sirt5
Tnfaip1
Ift20
Tomm5
a
Bbs9
Tent5b
Msh6
Klrd1
Taf7
Ccny
Cluh
Mrpl20
Uqcrc1
Ndufa12
Exd1
Chp1
Ankrd24
Sirt6
Cstdc2
Rnf8
Atp5k
Rhot1
Ufl1
Tdrd9
Atp5mpl
Zcchc10
Invs
Erp44
Inpp5k
Shcbp1
Nemp1
Cldnd1
Gosr1
Pot1a
R3hcc1
Scpep1
Aptx
Entpd4b
Entpd4
Tpk1
Arih1
Bcl2l14
Emsy
Alg1
Nudt15
Ccz1
Nus1
N4bp2l2
Taok2
Copg1
Gatb
Mad2l1
Dpy19l4
Dync1li2
Pacc1
Pla2g15
Ndufa5
Asb15
Alkbh8
Scn4a
Fra10ac1
Cdk5rap2
Zfp445
Tmed4
Dhodh
Sorbs1
H2-T10
Rrp15
2410137M14Rik
Sec23ip
Mcmbp
Rslcan18
Slc25a1
Acad9
Psmd12
Atic
Emc7
Ciao3
Bicral
Kctd5
Lmbrd1
Lgals3bp
Med4
Mterf4
Pdpk1
Timm44
Acadm
Smim12
Mrps14
Gfus
Ctnnbl1
Zscan20
Api5
Mrpl38
Dhx8
Cdpf1
Kdsr
Kdm3a
Tamm41
Tmx1
Trio
Ccr7
Limk1
Tulp2
Nucb1
Rbis
Tmem161a
Mad2l2
Cenpu
Eif2ak4
Zmpste24
Entpd7
Tpx2
Nme1
Ephx1
Kifc1
Wrap53
Trp53
Asb6
Pheta2
Naga
Tinf2
Med18
Ctnnb1
Mrpl45
Tyw3
Cryz
Bms1
Gigyf2
Cog2
Gna11
Acy1
Parl
Habp4
Fam98a
Snrnp27
Abhd18
Ebpl
Gtf2b
Snrnp48
Fan1
Ifna13
Hsbp1
Rad9b
Mrpl48
Cox7a2
Ttc26
2610001J05Rik
Dhx16
Rnf185
Tmem87b
Nup54
Ssh2
Trip4
Pemt
Pclaf
Necap2
Alg6
Psmb7
Tmem177
Ccdc57
Ccdc107
Pitrm1
Mrpl11
Jmjd7
Caap1
Rfx7
Hnrnpf
Zfp235
Nedd1
Slc36a1
Cdc73
Mien1
Myo9b
Haus8
Letmd1
Smg8
Ptpn4
Kxd1
Fkbp8
Psmb6
Psmd2
Rab3d
Rps26
Skp2
Lmbrd2
Tsc2
Nthl1
Sfxn4
Mkrn2
Ppp1r21
Prpf19
Gmps
Ifi27
Mtrex
Dhx29
C77080
Rraga
Tmem242
Exoc7
Alcam
Osbpl7
Psmd6
Mphosph6
Use1
Chordc1
Mapkbp1
Sbno2
Mfsd14a
Spink10
Fbxo38
Cpsf1
Zfp87
Washc3
Fam8a1
Rfc3
Ep400
Cbx1
Il1rap
Snd1
Brf2
Rsad1
Birc6
Atp5j2
Casq1
Naa35
Stxbp4
Cox11
Rbm48
Pex1
Pik3cd
Dnlz
Ppie
Zfp759
Ndufc1
Ints4
Pex3
Adat2
Pml
Tmem170
Poc5
Add3
Med6
Trim12c
Trim30b
Mrpl21
Ighmbp2
2210016L21Rik
Ccna2
Mrps26
Pank3
Ccdc181
Ccdc174
Trip11
Usp20
BC005624
Mad2l1bp
Cdiptos
Cdipt
Mybl2
Slc17a5
Borcs7
Wdr36
Zfp574
Grik5
Tmem154
Gsto2
Frg1
Nsa2
Gfm2
Eif2b3
Nbeal1
Htra2
Dqx1
Aup1
Por
Tmem14a
Mrps31
Gbe1
Pan2
Enpp7
Il23a
Ddx18
Zmym4
Tstd3
Cox7c
Setmar
Vps18
Pex11b
Dhx35
Plcxd1
Atxn7l2
Akap1
Timm17a
Ssbp1
Aph1b
Faap100
Fam3c
Sucla2
Casp8ap2
Fuca1
Ifrd2
Clec2d
Lsm5
Nwd1
Olfr525
Adnp
Dna2
Tcf25
Plk3
Rpl3l
Msrb1
Mrps18c
Helq
Tcerg1
Men1
Dph7
Sf3a3
Kifc5b
Pgap3
Oscar
Ndufa3
Calm3
Zcchc4
Sf3b5
Kctd6
R3hdm2
Ddx24
Senp8
Myo9a
Lap3
Cant1
Gle1
Znhit6
Marchf2
Stxbp3
Dnajc13
Aga
Coa3
Cntd1
Ndufs1
Eef1b2
Abcf2
Rsu1
Cox17
Tpcn2
Pars2
Maats1
Cops4
Rubcn
Ssr1
Nmnat1
Lzic
Plcd3
Crbn
Acbd4
Vta1
Stag1
Trim24
Ergic3
6430550D23Rik
Aspdh
Josd2
Ints14
Dnajc24
Creb3l2
Klhl17
Ric8b
Dnajb12
Prkar1b
Snrpe
Zfp747
Ncapg2
Dnaaf5
Arfgap3
Mindy2
Sec22b
Rpl29
Tmem248
Tomm6
Prmt3
Rps20
Ap1g1
Arl14ep
Pole4
Derl1
Gpatch2l
Cpne3
Rmdn1
Ubac2
Gins4
Cct8
Hspa4
Zfp712
Gemin4
Dbil5
Crtc2
Nrde2
Mtmr10
Dpp8
Gtpbp4
Gstm1
Zfp456
Rmnd1
Armt1
Tesmin
Bola3
Nuf2
Atg2a
Stx16
Kbtbd7
Prpf18
Mib1
Ice1
Cdc25a
Prkrip1
Mmachc
Ccdc163
Irak2
Ctsd
Zfp169
Uchl5
Ro60
Zbtb45
Napepld
Rpl15
Nkiras1
Dnpep
Phb
Mios
Glrx2
Dennd10
Tars2
Polr3f
Dzank1
Pdcl
Nfat5
Cebpzos
Mrps15
Vcpkmt
Uxs1
Dars2
Tomm7
Ap3s2
Tmem106c
Mtpn
Map2k2
Tbc1d31
Rab1b
Ccno
Pfas
Zfp64
Mmadhc
Anxa5
1810062G17Rik
Psma4
AY074887
Ddx56
Man2b2
Sdhaf3
Utp3
Lsm11
Fitm2
Ddhd2
Stk40
Ddx41
Gm10509
Ccl1
Zup1
Mtmr6
Faim
Tomm40l
Apoa2
Nfxl1
Acin1
Ndufs2
Adamts4
Tmem14c
Amigo3
Gmppb
Gtf3c3
Alkbh3
Erlin2
Cep350
Bud13
Dhrs13
Slc25a38
Zfp658
Vps41
Gm15517
Usp44
Flt3l
Gatd3a
Vps28
Zfp512
Tph2
B3glct
Rpl37
Sema3b
Helb
Cep152
Elac2
Mitf
Megf8
Aatf
Vpreb1
Top3b
E2f5
Rab5a
1700067K01Rik
Espl1
Rxra
Ccin
Rps29
Tprkb
Nat8f1
Jrk
Rps7
Nomo1
Abcc6
Carm1
Npm1
Pigu
Yipf1
Map4k4
Pdcd5
Tmem101
Wdr24
Ndufaf5
Esf1
Opa1
Zc3h15
Srrm2
Edem2
Crebrf
Tram1
Caprin2
Cdk20
Otud6b
Myoz3
Utp23
Slc17a7
Srprb
Med15
Yif1b
Tex261
Hilpda
Ifnar1
Morc3
Usp8
Nceh1
Psmd11
Gins3
Itpa
Ddrgk1
Fam210b
Wdr7
Ccnt2
Bglap3
Dcps
Paqr6
Dennd6b
Spop
A930007A09Rik
Syt11
Ndrg3
Smarcd2
Casp8
Smc3
Psmb2
Cyp4f13
Ptprs
Abcb9
Abtb1
Smtn
Blvra
Tex30
Pcnt
Tmem270
H3f3c
Rbsn
Ndufaf1
Ppih
Rps6kb2
Exd2
Zfp433
Gm32687
Ermp1
Zc3h11a
Zbed6
Naa30
Cmtr2
Adck1
Ifi30
Map4
Rbm45
Rad50
Ptprj
Sos1
Serping1
Gtse1
Xrra1
Spcs2
Dnase1l3
Ddb2
Snx3
Aco1
Cryl1
Slc25a17
Vps50
Hepacam2
Smim13
Rap1gap2
Fam118a
Utp25
Fam193a
Zfp870
Taf3
Clec2m
Snx11
Dhx34
Mon1a
Churc1
Mrpl35
Agk
Mrps33
H2-Q8
H2-Q6
Mc5r
Hint3
Lclat1
Zfp715
Zfp607b
Hddc2
Map3k10
Ggcx
Gramd1c
Cox6b1
Rrn3
Ubxn2b
Pmpcb
Tmem109
Chd8
Ttc5
Abcd4
Sod1
Stard5
Prc1
Mzt2
Esco1
Dcaf10
Atxn1l
Snapin
Lrif1
Rft1
Inhbe
Erich4
Nol10
Zfp94
Dmac2
Asf1b
Prcc
Steap3
Ap1m1
Atg5
Pwwp3a
Hrob
Slc9a9
Zfp953
Zfp189
Mrpl50
Ddx1
Fancc
Ctu1
Zkscan3
Vps33a
Tomm22
Aopep
Rps2
Ndufb10
Ppcdc
Tigd2
Ipo8
Zfp873
Mrps17
Axin1
Polq
Yae1d1
Nlrp10
Eif3f
Fam136a
Serinc1
Slc17a8
Nsfl1c
Gaa
Rps19bp1
Zfp329
Faf2
Rab33b
Cluap1
1700037C18Rik
Tsga10
Znrd1as
Entpd6
Abraxas2
Znrd1
Ttll12
Atxn3
Dhdds
Lars
Vps8
Tmem160
Zdhhc12
Pdcd6
Mrpl10
Lrrc46
Ushbp1
Babam1
Ptpn1
Hps3
Zfp566
Akap13
Fbxo10
Zfp260
Nubpl
Tpp1
Ltbp2
Def8
Mars2
Dnase2a
Prelid3b
Brpf1
Ntmt1
Rps24
Polr3a
Taf4b
Zfp458
Oser1
Oasl2
Armh3
Hps6
Nob1
Med13
Phlpp1
Usp30
Arrb2
Cfap126
Nelfcd
Ppib
F2r
Dimt1
Napa
Mettl9
Sgta
Cpped1
Slc39a11
Fancg
Ttc14
Fam187b
Lsr
Tmed1
Irf9
Dlgap5
Zfp957
Zfp764
Gmfb
Kansl3
Fer1l5
Tube1
Fam229b
Pigz
Polr3b
Tmem68
Tgs1
Ankrd37
Trmt11
Sdhaf4
Tmem256
Nlgn2
Uqcc1
Ms4a10
Zfp595
Zfand2a
Rac3
Osbp
Sesn2
Dhx33
Mcm3
Mrpl39
Ppp4r2
4930558K02Rik
Pigc
Copz1
Mrpl30
Mitd1
Asxl2
Dhcr7
Kntc1
Nadsyn1
Jph2
Sar1b
Stk38l
Dguok
Nop14
Grk4
Slc9a1
Rxylt1
Papss1
Fez2
Yipf5
Med28
Acod1
Zfp97
Kcne3
Abcc10
Selenof
Hs2st1
Olfr312
Arhgap15
Fpgs
Arcn1
Ift46
Zfp142
Bcs1l
Tonsl
Zswim4
Mrpl36
Gpc5
Msl3l2
Trim21
Ttll13
Mtres1
Pdk1
Mettl17
Slc25a23
Crb3
Ndufv1
Xrcc2
Sdad1
Hdac6
Tut1
Cbl
Trim68
Cmtr1
Trappc2l