ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1745539 | Cortex
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◢ SRX1745538: Cortex

◣ SRX1745539: Cortex

◢ Rai1: STRING

Cldn34d
Twist2
Tex33
Cwc22
Npm2
Plekhm2
Ankrd35
Axin2
Olfr394
Trarg1
Mdfic
Wfdc13
9430069I07Rik
Hbb-bs
Hbb-b1
Gm5591
Vmn2r105
Ube2i
Agtr1a
Atxn7l3b
Rnf135
Thrap3
Crebbp
Pcbp2
Hbb-bt
Hbb-b2
Tmem236
Mrpl48
Rbm25
Olfr806
Odf2l
1110004F10Rik
Klk12
Psg23
Esp34
Eif4h
Atp6v1g1
Folr2
Tardbp
Ranbp2
Gm39773
Srsf11
Lrrc40
Npas4
Trdmt1
Hdhd2
1700093K21Rik
Ric8b
Prpf39
Rbp2
Wdr41
Myl4
Cdc27
Sharpin
Maf1
Gm35339
Rlbp1
Fanci
Zfp112
Rcn2
Cnr1
Mkln1
Ube2l3
Orc4
Mbd5
Rab2a
Glp2r
Sdhaf2
Cpsf7
Ccdc62
Dyrk1a
Olfr1047
Sf1
Hnrnph1
Klhl9
Prcc
Atg4c
Psmd12
Pura
Vcp
Cnbp
Rbm12b1
Crtc2
Aadacl4fm2
Tmprss5
Mrpl58
Ogfr
Hps6
Armh3
Mavs
Scfd2
Fip1l1
Psph
Cct6a
Slc36a2
Olfr20
Mapk8ip3
Setmar
Dpys
Usp14
Psmd14
Tbc1d32
Tcea1
Copb1
Mfn2
Glra1
Arsg
Dhx30
Endov
Olfr282
Kat7
Asb12
Rmi1
Hnrnpk
Rbm39
Skp1
Has3
Accsl
Zdhhc1
Iqub
Col8a2
Sun1
Casd1
Smarce1
Snrpd1
Taf8
Ccnd3
Leng8
Rnf14
Ubqln3
Hectd1
Utp11
Atp5g2
Elavl1
Abhd6
Wnt8b
Eif2s2
Sufu
Actr1a
Cish
Slc25a36
Kdm3b
Fancd2os
Brk1
Gimap5
Nupl2
Tmx4
Fam98b
Olfr741
Hnrnpm
Cd81
Pdcd6ip
Slfnl1
Snx4
Fam120b
Ythdf2
Nbr1
Brca1
Zfp12
Rps15
Apc2
Pskh1
Smndc1
Rpgrip1l
Fto
Rbm7
Gm5617
Tmem125
Dele1
Btnl1
Uqcrc2
Tmem67
Rbm12b2
Rraga
Rab5b
Scamp2
A2ml1
Cyth3
Rab11b
Eri3
Cfap410
Galnt11
Glo1
Ccser2
Syde1
Fbxw5
C8g
Eef1a1
Dnajb13
Rbbp6
Txnl4a
Gm16286
Exo1
Cibar1
Mmrn1
Mrps28
Dusp11
Ifna1
Psmd7
Dis3l
Tia1
Rtcb
Hsf1
Bop1
Ankrd53
Rnf138
Sf3a1
Ccdc157
Psma2
Mrpl32
5031439G07Rik
Gprc5a
Olfr1214
Psmc6
Zmat5
Uqcr10
Clk3
Rdh14
Krt84
Pank3
Tmem17
Tax1bp1
Ly75
Srp54c
Srp54b
Srp54a
Actr8
Gosr1
Smu1
Sem1
Rab18
Eef1akmt2
Lmbr1
Rnf215
Rasgrp3
Polr2m
Dhx15
Slc25a3
Atp6v0a1
Plpp7
Nek4
Lman2
Ube2e1
Dnm1l
Exoc2
Tor1aip2
Tor1aip1
Zfp963
Ubr3
Ipo7
Smarcad1
0610009B22Rik
Tmem141
Fcna
Ccdc183
Prox2
Dlst
Nenf
Stambp
Rtf1
Hps5
Gtf2h1
Prmt6
Pan3
Actr2
Usp5
Cdca3
Iqcb1
Eaf2
Fam168a
Ice2
Uqcrfs1
Zfp62
Tmem88
Naa38
Cyb5d1
Inpp5b
Hnrnpul1
Tnfaip8l1
Cd36
Mettl25
Ccdc59
Mtpn
Smim13
Fhit
Pex7
Dtwd2
Hmgn1
Usp47
Fbxo41
Oxsm
Ngly1
Oxnad1
Dph3
Thumpd1
Gnl2
Pink1
Ibtk
Rps29
Zfp26
Tekt3
Cpsf1
Zfp866
Map3k3
Ythdc1
Slc5a7
S100a1
S100a13
Chtop
Rai1
Amz2
Mlf2
Hnrnpll
Spag6
Hps3
Zfp438
Hsd17b12
Kcnj16
Prl7c1
Akr1c18
Zc3h18
Cacng2
Dennd6a
Tcp1
Mrpl18
Vps51
Tmem262
Clpx
Zscan25
Rabl6
Scaf8
Anapc10
Abce1
Ccnt1
4930415O20Rik
Tm9sf2
Tlk2
Ptpn23
Phf7
Bap1
Pef1
Arf2
Slc25a27
Cyp39a1
Jagn1
Ptbp2
Cox14
Trim44
Vapb
Wdr33
Ino80d
Nup214
Zc3h4
Pgap2
Nup98
AW549877
Supt6
Sdf2
Ppp5c
Pcbp1
Cyp3a59
Vamp3
Zdhhc13
Magoh
Tspyl1
Tmem43
Chchd4
Kiz
Slc10a7
Rbmxl1
Ncl
Elp1
Abitram
Lpo
Zbtb21
Akap8l
Defb23
Lrrc57
Haus2
Slf2
Vps37a
Cnot7
Atp5l
D2hgdh
Vmn1r60
Btbd9
Cd300e
Glg1
Ttc7b
Vdac1
Eif3e
Olfr822
Kdm2b
Luc7l
Mff
Gpd2
Zkscan1
Slc36a1
Lig3
Cul5
Cul1
Ptrhd1
Cenpo
Wdr34
Ddx23
Narf
Dus4l
Cog5
Nxf1
Gga2
Alad
Zfp398
Ankrd54
Lnpk
Napa
Rp9
Hnrnpu
Micos10
Rptor
Zfp871
Hnrnpa0
Scarb2
Capsl
Ammecr1l
Ssr3
Serinc1
Sltm
Tnrc6a
Clcc1
Ttll8
Rad23b
Opa1
Itpa
Ddrgk1
Rfc4
Sema4d
Eif2ak4
Sspn
Dnajc1
Sike1
Ankle2
Rplp0
Aatf
Farp2
Zc3h12c
Dnajc25
Zbp1
Zfp386
Clk1
Cbr4
Ints6
Tal1
Hacd3
Arih1
Itgb1
Atp5g3
Crppa
Zkscan3
Iapp
Lpin1
Zbtb12
Ehmt2
Psma3
Spg20
Cbfa2t2
Iba57
Magohb
Igfbp2
Ndufb2
Srebf1
Usp24
Rps13
1810013L24Rik
Oxa1l
Tomm70a
Rhbdd1
Zfp672
Trmt1
Nacc1
Pdia3
Catsper2
Uqcrh
Lrrc41
2700097O09Rik
Lyrm1
Dcun1d3
Kpna6
Prnp
Prn
Nup205
Wdr77
Atp5pb
Nae1
Car7
Zfp746
Ccdc9
Hipk3
Naa30
Snrpe
Pkd1
Bub3
Arih2
Phrf1
Bmt2
Mansc4
Klhl42
Ift52
Malsu1
Tgfbrap1
AI597479
Eif4a2
Katnal1
Capn2
Senp8
Myo9a
Arf4
Smg9
Edf1
Usp40
Stx18
Qtrt2
Ccdc191
Tmem231
Psmd2
Snx2
Zfp263
Inpp1
Hexim2
Sel1l
Sh3kbp1
Dennd10
Ndel1
Atp5b
Wbp11
BC049715
Sertad2
Ubxn7
Atp6v1h
Akt1
Zbtb42
Napepld
Eral1
Saraf
Herpud2
Zfp1
Capn7
Rpl27a
Ifi47
Setd7
Zbtb8os
Rbbp4
Eif4g2
Osgin2
Zfp319
Usb1
Olfr464
Gpam
H4c2
H4c1
H3c1
H1f1
Tet3
Rexo1
Cers2
Anxa9
Amfr
Rpl19
Cacnb1
Pja2
Thap3
Sf3b1
Hspe1
Hspd1
Ccny
Ywhab
Dyrk1b
Fam174a
Rhot1
Vps35
Pdhb
Arl10
Sugp1
Mau2
Sf3a2
Plekhj1
Zdhhc21
Setd5
Nfkbia
Ccnt2
Sqor
Tmem115
Phc3
Sec13
Ahctf1
Mmadhc
Prpf8
Lpcat1
Tmem144
Trim27
Srsf1
Senp6
Ppp3cb
Ruvbl1
Tbce
Psma1
Ssrp1
P2rx3
Zfp637
Nckap1
Mios
Tbc1d19
Nrg1
Cdip1
Mettl9
Ccnl1
Marchf5
Cpeb3
Relt
9430015G10Rik
Ldah
Twf1
Bpnt2
Fbxo7
Strap
Uhrf2
Lonp2
Fbxw4
Zfp607b
Map3k10
Prkacb
Med15
Urgcp
Ypel5
Tnks2
Scaf4
Spink10
Pdpr
Fbxo38
Ppp6r2
Dzip3
Cip2a
Gm10509
Usp22
Cct2
Ep400
Cct5
Atpsckmt
Pafah1b1
Tmem135
1700066M21Rik
Cox5a
Slc25a4
Repin1
Gm5111
Hddc2
Kat5
Fbxo4
Slc30a5
Gm3448
Gm3417
9030025P20Rik
Pdcd6
Kdm4c
Ccdc90b
Cnih1
Zfp551
Sec61a2
Ddx50
Zfp638
Rsbn1
Ntmt1
Spag9
Ehmt1
Smarca4
Dcp1a
Gtf2ird2
Arl5a
Rpl30
Opa3
Ociad1
Rpl3
Tssk1
Dgcr2
Prkn
Pacrg
Retreg2
Cnppd1
Zmynd11
Rnf10
Efr3a
Ift22
Cbx1
Shisa8
Afg3l2
Rwdd2b
Mcl1
Mtdh
Rab11fip5
Gpatch8
Selenok
Gcc1
Fscn3
Arf5
Sik3
Pafah1b2
Rnf7
Oma1
Socs6
Mat2b
Cbarp
Atp5d
Smarcb1
Arl14ep
Fam32a
Smim7
Kifbp
Map1lc3a
Scyl1
Ola1
Exoc6b
Arhgap39
Pnn
Mfsd12
Zscan22
C87436
Ykt6
Npdc1
Nudt19
Snx17
Eif2b4
Sec16a
Rc3h1
Sap130
Nudcd1
Eny2
H4f16
H2aj
Rbm27
Pgap4
Rbm22
Cds2
Msmo1
Maml1
Lcmt2
Adal
Mynn
Actrt3
Psmb5
Sult4a1
Tada1
Rab40c
Prr3
Gnl1
Zbtb44
Unk
Rabggtb
Srpk1
Vbp1
Sod1
Gdf3
Larp1
Sugp2
Armc6
Irx2
Hagh
Fahd1
Plat
Cacul1
Trpc4ap
Ythdf3
Shox2
Rsrc1
Chmp3
Pitx3
Gbf1
Ppp6r1
Flot2
Cyp2f2
Zfp74
Sugct
Mplkip
Far2
Rab3a
Cbll1
Smim10l1
Surf4
Stkld1
Arl8a
Mrps36
Prpf19
Taf1d
4931406C07Rik
Ankrd17
Borcs7
Tomm20
Dnal4
Pycr2
Rfesd
Nsd3
Letm2
Zdhhc20
Maml3
Hspa8
Zfp113
Pla2g15
Scrt1
Naa15
Mrps9
Shprh
Myom2
Cct8
Idi1
Actr3
Nckipsd
Smim11
Zfp358
Rragc
Son
Gm36712
Gart
Dennd6b
Cnot3
2300009A05Rik
Megf8
Ica1
Ctnnd2
Fam160b1
Zfp868
Dennd4c
Mrps26
Zkscan8
Ttc9c
Hnrnpul2
Tmem87b
Rnf146
Morc2a
Pfn2
Pitpna
Rbm18
Mrrf
Mapk9
Nup153
Tent2
Inpp5f
Setd2
Pomt2
Gstz1
Shisa7
Spata45
Gtf2f1
Cox6c
Sqstm1
Coq2
Ppp4r3a
Zfp874b
Btrc
Psmb2
U2surp
Rnmt
Fam210a
Tra2b
Fbxl4
Rsl1d1
Dido1
Usp36
Ndufb1
Cpsf2
R3hdm4
Kiss1r
Ankrd13d
Ube2j1
Capn15
Taok1
Pip4k2b
Mettl4
Trip11
Top2b
Lsm2
Klhl24
Iqsec3
Eif3a
Kif1a
Phospho2
Ccdc173
Cd84
Smim17
Ube2o
Anapc4
Myadm
Rplp2
Pidd1
Mob4
Dynlrb1
Zgrf1
Larp7
Zfp354c
Kcnt1
Appbp2
Zfp143
Nono
Naa60
Cldn14
Urb2
Taf5l
Rnf13
Zwint
Fblim1
Ubxn8
Ubn2
Gm33989
Zfp943
Zfp942
Tmed10
Atp6v1e1
Pigq
Nhlrc4
Ssu72
Supv3l1
Ulk2
Fam76a
Stau1
Ssh1
Camk2n2
Asah1
Cwc27
Med17
BC048403
Zzef1
Cyb5d2
Rap1b
Drg1
Ntan1
Gxylt1
Ankrd11
Ate1
Rab1a
Cluap1
1700037C18Rik
Hmbs
Slc45a1
Cops3
Drap1
AI837181
Atxn2
Unc50
Coa5
Jakmip3
Serpinb6a
Ripk1
Iws1
Hspa5
Arl6ip1
Elk4
Dus3l
Polr1d
Lnx2
Trub1
Tom1l2
Drc3
Recql4
Lrrc14
Gpr75
Mlh1
Epm2aip1
Lrrc58
Pmm1
Zc3h6
1700031F05Rik
Zfp334
Ilkap
Bnip3l
Kif13a
Dennd1a
1600014C10Rik
Hid1
Snrnp35
Rilpl2
Paip2
Cox8a
Map2k2
Txndc11
Ercc1
Ckap5
Srp9
Eif3m
Dnaja1
Prdm15
Syk
Arfgef2
Zfp791
Trim32
Lysmd4
Trrap
Actb
Gyg
Ccnl2
Gtpbp8
Galk2
Cops2
Grk6