ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1745539 | Cortex
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◢ SRX1745538: Cortex

◣ SRX1745539: Cortex

◢ Rai1: STRING

Tex33
Cwc22
Npm2
Vmn2r105
Ube2i
Agtr1a
Atxn7l3b
Thrap3
Pcbp2
Hbb-bt
Hbb-b2
Mrpl48
Rbm25
Odf2l
1110004F10Rik
Psg23
Eif4h
Atp6v1g1
Tardbp
Ranbp2
Gm39773
Srsf11
Lrrc40
Hbb-bs
Hbb-b1
Npas4
Trdmt1
Hdhd2
Ric8b
Prpf39
Wdr41
Myl4
Cdc27
Sharpin
Maf1
Zfp112
Rcn2
Mkln1
Ube2l3
Orc4
Mbd5
Rab2a
Sdhaf2
Cpsf7
Sf1
Hnrnph1
Klhl9
Prcc
Atg4c
Psmd12
Pura
Vcp
Cnbp
Rbm12b1
Crtc2
Tmprss5
Mrpl58
Ogfr
Armh3
Fip1l1
Psph
Cct6a
Slc36a2
Mapk8ip3
Setmar
Usp14
Psmd14
Tbc1d32
Tcea1
Copb1
Mfn2
Glra1
Dhx30
Endov
Kat7
Rmi1
Hnrnpk
Rbm39
Skp1
Zdhhc1
Sun1
Casd1
Smarce1
Snrpd1
Taf8
Leng8
Rnf14
Hectd1
Utp11
Atp5g2
Elavl1
Eif2s2
Actr1a
Slc25a36
Kdm3b
Brk1
Nupl2
Tmx4
Fam98b
Hnrnpm
Cd81
Pdcd6ip
Slfnl1
Snx4
Fam120b
Ythdf2
Nbr1
Brca1
Zfp12
Apc2
Pskh1
Smndc1
Rpgrip1l
Fto
Rbm7
Gm5617
Dele1
Uqcrc2
Rbm12b2
Rraga
Rab5b
Scamp2
Rab11b
Eri3
Cfap410
Galnt11
Glo1
Fbxw5
C8g
Eef1a1
Dnajb13
Rbbp6
Txnl4a
Gm16286
Exo1
Cibar1
Mrps28
Dusp11
Psmd7
Dis3l
Tia1
Rtcb
Hsf1
Bop1
Rnf138
Sf3a1
Ccdc157
Psma2
Mrpl32
5031439G07Rik
Psmc6
Zmat5
Uqcr10
Clk3
Rdh14
Pank3
Tmem17
Tax1bp1
Srp54c
Srp54b
Srp54a
Actr8
Gosr1
Smu1
Sem1
Rab18
Eef1akmt2
Lmbr1
Rnf215
Rasgrp3
Polr2m
Dhx15
Slc25a3
Plpp7
Nek4
Lman2
Ube2e1
Dnm1l
Exoc2
Tor1aip2
Tor1aip1
Zfp963
Ubr3
Ipo7
Smarcad1
0610009B22Rik
Tmem141
Dlst
Nenf
Stambp
Rtf1
Hps5
Gtf2h1
Prmt6
Pan3
Actr2
Usp5
Cdca3
Iqcb1
Eaf2
Fam168a
Ice2
Uqcrfs1
Zfp62
Naa38
Cyb5d1
Inpp5b
Hnrnpul1
Cd36
Mettl25
Ccdc59
Mtpn
Smim13
Fhit
Pex7
Dtwd2
Hmgn1
Usp47
Fbxo41
Oxsm
Ngly1
Oxnad1
Dph3
Gnl2
Pink1
Ibtk
Rps29
Zfp26
Cpsf1
Zfp866
Map3k3
Ythdc1
Chtop
Rai1
Amz2
Mlf2
Hnrnpll
Hps3
Zfp438
Hsd17b12
Zc3h18
Cacng2
Dennd6a
Tcp1
Mrpl18
Vps51
Clpx
Zscan25
Rabl6
Scaf8
Anapc10
Abce1
Ccnt1
Tm9sf2
Tlk2
Ptpn23
Phf7
Bap1
Pef1
Arf2
Slc25a27
Cyp39a1
Jagn1
Ptbp2
Cox14
Trim44
Wdr33
Ino80d
Nup214
Zc3h4
Pgap2
Nup98
AW549877
Supt6
Sdf2
Ppp5c
Pcbp1
Vamp3
Zdhhc13
Magoh
Tspyl1
Tmem43
Chchd4
Kiz
Slc10a7
Rbmxl1
Ncl
Elp1
Abitram
Zbtb21
Akap8l
Lrrc57
Haus2
Slf2
Vps37a
Cnot7
Atp5l
D2hgdh
Btbd9
Cd300e
Glg1
Ttc7b
Vdac1
Eif3e
Olfr822
Luc7l
Mff
Gpd2
Zkscan1
Slc36a1
Lig3
Cul5
Cul1
Ptrhd1
Cenpo
Wdr34
Ddx23
Narf
Dus4l
Cog5
Nxf1
Zfp398
Ankrd54
Lnpk
Napa
Rp9
Hnrnpu
Micos10
Rptor
Zfp871
Hnrnpa0
Scarb2
Ammecr1l
Ssr3
Serinc1
Sltm
Tnrc6a
Clcc1
Rad23b
Opa1
Ddrgk1
Rfc4
Sema4d
Eif2ak4
Sspn
Dnajc1
Sike1
Ankle2
Rplp0
Aatf
Farp2
Zc3h12c
Dnajc25
Zbp1
Zfp386
Clk1
Cbr4
Ints6
Hacd3
Arih1
Itgb1
Atp5g3
Crppa
Zkscan3
Lpin1
Ehmt2
Psma3
Spg20
Cbfa2t2
Iba57
Magohb
Ndufb2
Srebf1
Usp24
Rps13
1810013L24Rik
Oxa1l
Tomm70a
Rhbdd1
Zfp672
Nacc1
Pdia3
Catsper2
Uqcrh
Lrrc41
2700097O09Rik
Lyrm1
Dcun1d3
Kpna6
Prnp
Prn
Nup205
Wdr77
Atp5pb
Nae1
Car7
Zfp746
Ccdc9
Hipk3
Naa30
Snrpe
Pkd1
Bub3
Arih2
Phrf1
Bmt2
Klhl42
Ift52
Malsu1
Tgfbrap1
AI597479
Eif4a2
Katnal1
Capn2
Senp8
Myo9a
Arf4
Smg9
Edf1
Usp40
Stx18
Qtrt2
Ccdc191
Tmem231
Psmd2
Snx2
Zfp263
Inpp1
Hexim2
Sel1l
Dennd10
Ndel1
Atp5b
Wbp11
BC049715
Sertad2
Ubxn7
Akt1
Napepld
Eral1
Saraf
Herpud2
Zfp1
Capn7
Rpl27a
Ifi47
Setd7
Zbtb8os
Rbbp4
Eif4g2
Osgin2
Zfp319
Usb1
Gpam
H4c1
Tet3
Rexo1
Cers2
Anxa9
Amfr
Rpl19
Pja2
Thap3
Sf3b1
Hspe1
Hspd1
Ccny
Ywhab
Dyrk1b
Fam174a
Rhot1
Vps35
Pdhb
Sugp1
Mau2
Sf3a2
Plekhj1
Zdhhc21
Setd5
Nfkbia
Ccnt2
Tmem115
Phc3
Sec13
Ahctf1
Mmadhc
Prpf8
Lpcat1
Trim27
Srsf1
Senp6
Ppp3cb
Ruvbl1
Tbce
Psma1
Ssrp1
Zfp637
Nckap1
Mios
Tbc1d19
Cdip1
Mettl9
Ccnl1
Marchf5
Cpeb3
9430015G10Rik
Ldah
Twf1
Bpnt2
Fbxo7
Strap
Uhrf2
Fbxw4
Zfp607b
Map3k10
Prkacb
Med15
Urgcp
Ypel5
Tnks2
Scaf4
Spink10
Pdpr
Fbxo38
Ppp6r2
Dzip3
Cip2a
Gm10509
Usp22
Cct2
Ep400
Cct5
Atpsckmt
Pafah1b1
Tmem135
1700066M21Rik
Slc25a4
Repin1
Hddc2
Kat5
Fbxo4
Gm3448
Gm3417
9030025P20Rik
Pdcd6
Kdm4c
Ccdc90b
Cnih1
Zfp551
Sec61a2
Ddx50
Zfp638
Rsbn1
Ntmt1
Spag9
Ehmt1
Smarca4
Dcp1a
Gtf2ird2
Arl5a
Rpl30
Opa3
Ociad1
Rpl3
Dgcr2
Retreg2
Cnppd1
Zmynd11
Rnf10
Efr3a
Ift22
Cbx1
Afg3l2
Rwdd2b
Mcl1
Mtdh
Rab11fip5
Gpatch8
Selenok
Arf5
Sik3
Pafah1b2
Rnf7
Oma1
Socs6
Mat2b
Smarcb1
Arl14ep
Fam32a
Smim7
Kifbp
Map1lc3a
Scyl1
Ola1
Exoc6b
Arhgap39
Pnn
Mfsd12
Zscan22
C87436
Ykt6
Npdc1
Nudt19
Snx17
Eif2b4
Sec16a
Rc3h1
Sap130
Nudcd1
Eny2
H4f16
Rbm27
Pgap4
Rbm22
Cds2
Msmo1
Maml1
Mynn
Psmb5
Sult4a1
Tada1
Rab40c
Prr3
Gnl1
Zbtb44
Unk
Rabggtb
Srpk1
Vbp1
Sod1
Gdf3
Larp1
Sugp2
Armc6
Hagh
Fahd1
Cacul1
Trpc4ap
Ythdf3
Rsrc1
Chmp3
Gbf1
Ppp6r1
Flot2
Zfp74
Sugct
Mplkip
Far2
Rab3a
Cbll1
Smim10l1
Surf4
Stkld1
Arl8a
Mrps36
Prpf19
Taf1d
4931406C07Rik
Ankrd17
Borcs7
Tomm20
Dnal4
Pycr2
Rfesd
Nsd3
Zdhhc20
Hspa8
Zfp113
Pla2g15
Scrt1
Naa15
Mrps9
Shprh
Myom2
Cct8
Idi1
Actr3
Nckipsd
Smim11
Zfp358
Rragc
Son
Dennd6b
Cnot3
2300009A05Rik
Megf8
Ica1
Fam160b1
Zfp868
Dennd4c
Mrps26
Zkscan8
Ttc9c
Hnrnpul2
Tmem87b
Rnf146
Morc2a
Pfn2
Pitpna
Rbm18
Mrrf
Mapk9
Nup153
Tent2
Inpp5f
Setd2
Pomt2
Gstz1
Spata45
Gtf2f1
Cox6c
Sqstm1
Coq2
Ppp4r3a
Zfp874b
Btrc
Psmb2
U2surp
Rnmt
Fam210a
Tra2b
Fbxl4
Rsl1d1
Dido1
Usp36
Ndufb1
Cpsf2
R3hdm4
Kiss1r
Ankrd13d
Ube2j1
Capn15
Taok1
Pip4k2b
Mettl4
Trip11
Top2b
Lsm2
Klhl24
Iqsec3
Eif3a
Kif1a
Phospho2
Ccdc173
Ube2o
Anapc4
Myadm
Rplp2
Mob4
Dynlrb1
Zgrf1
Larp7
Zfp354c
Appbp2
Zfp143
Nono
Naa60
Urb2
Taf5l
Rnf13
Zwint
Ubxn8
Ubn2
Gm33989
Zfp943
Zfp942
Tmed10
Atp6v1e1
Pigq
Ssu72
Supv3l1
Ulk2
Fam76a
Stau1
Ssh1
Asah1
Cwc27
Med17
BC048403
Zzef1
Cyb5d2
Rap1b
Drg1
Ntan1
Gxylt1
Ankrd11
Ate1
Rab1a
Cluap1
1700037C18Rik
Hmbs
Slc45a1
Cops3
Drap1
AI837181
Atxn2
Unc50
Coa5
Jakmip3
Serpinb6a
Ripk1
Iws1
Hspa5
Arl6ip1
Elk4
Dus3l
Polr1d
Trub1
Tom1l2
Drc3
Lnx2
Recql4
Lrrc14
Gpr75
Mlh1
Epm2aip1
Lrrc58
Pmm1
Zc3h6
Zfp334
Ilkap
Bnip3l
Kif13a
Dennd1a
1600014C10Rik
Hid1
Rilpl2
Paip2
Cox8a
Map2k2
Txndc11
Ercc1
Ckap5
Srp9
Eif3m
Dnaja1
Prdm15
Arfgef2
Zfp791
Trim32
Lysmd4
Trrap
Actb
Gyg
Ccnl2
Gtpbp8
Galk2
Cops2
Grk6
Hdac2
Rps6kl1
Ift57
Ube3a
Mgrn1
Npepps
Aplp1
Braf
E130311K13Rik
Echdc1
Ppil4
Stpg2
Guf1
Prkcsh
Ccdc151
Zfp87
Zfp606
Gnas
Tubd1
Rps6kb1
Aco1
Mrps15
Rab28
Arl2
Brwd1
Atp6v0e2
Gbe1
Ppp1r2
Pnrc1
Rtraf
Lemd2
Gnb1l
Scamp1
Slc25a23
Mpc2
Dcaf6
Atf4
Rab11fip2
Rrp1
Ncor2
Zfp592
Ncoa4
Kat6a
Dph5
Fsd1l
Ankrd46
Sidt2
Ptpn1
Mkrn2
Xpo6
Mocs1
Gnpat
2810004N23Rik
Caml
Ubap1
Atp6v1c1
Stard3nl
Rab30
Ubr2
Slc30a5
Slc25a32
Dcaf13
Itm2b
Xbp1
Taf9
Rad17
Ak6
Selenoo
Ppp2r2d
Mapk1ip1
Scamp4
Adat3
Nalcn
Tm2d1
Ahcyl1
Cand1
Wrnip1
Msh6
Epb41l1
Vps54
H2bu2
Med23
Pttg1ip
Dock7
Gps2
Kif5b
Peli1
Npm1
Zfp771
Tbc1d9b
Btf3
Ext2
Extl3
Elavl3
Rab39b
Atp6ap1
Tpr
Odr4
Tpm1
Ttll11
Arid1b
Zfp706
Zfp37
Pcmt1
Lats1
Uqcrq
Zcchc9
Caprin1
Mybbp1a
Ep300
Zfp799
Fbrs
Slc7a6
Zcchc7
Tarbp2
Dnaja2
Kdelr1
Rhbdd2
Mark1
Fbf1
Rcbtb2
Caskin1
Def8
Sys1
Gls2
Yars
S100pbp
Rab22a
Api5
Trak2
Yipf4
Gpr89
Ddx6
Pdss2
Tdg
Mfsd14a
Cplx2
Ssr1
Tbrg4
Uqcrc1
Ddx47
Fam131b
Tbc1d23
Tnpo1
Vps26b
Ncapd3
Nepro
Katnbl1
Tmem170b
Prelid3a
Slc35b4